RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 FLYWCH1Q4VC44 716 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 TBL1XR1Q9BZK7 514 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 KCNN2Q9H2S1 579 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 SPTBP11277 2137 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 CLCA1A8K7I4 914 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 MAN2B1O00754 1011 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 RNH1P13489 461 aaKnown RBP5.97□□□□□ -1.45
PRKDC-202ENST00000338368 KIR2DS3Q14952 304 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 PRPF38BQ5VTL8 546 aaKnown RBP5.97□□□□□ -1.45
PRKDC-202ENST00000338368 NPLQ9BXD5 320 aaPredicted RBP5.97□□□□□ -1.45
PRKDC-202ENST00000338368 COMMD3Q9UBI1 195 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 CA14Q9ULX7 337 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 PRAMEF26H0Y7S4 382 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 CDC123O75794 336 aaPredicted RBP5.97□□□□□ -1.45
PRKDC-202ENST00000338368 ARAFP10398 606 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 TRA2BP62995 288 aaKnown RBP5.97□□□□□ -1.45
PRKDC-202ENST00000338368 FAM219BQ5XKK7 198 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 TBPL2Q6SJ96 375 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 PRSS48Q7RTY5 328 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 GALNT12Q8IXK2 581 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 UBE2J2Q8N2K1 259 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 GAL3ST3Q96A11 431 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 CIDECQ96AQ7 238 aaPredicted RBP5.97□□□□□ -1.45
PRKDC-202ENST00000338368 NDC1Q9BTX1 674 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 HDAC8Q9BY41 377 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 PREBQ9HCU5 417 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 PPT2Q9UMR5 302 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 SAGE2PA6NJ88 616 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 AZGP1P25311 298 aaKnown RBP5.97□□□□□ -1.45
PRKDC-202ENST00000338368 YPEL5P62699 121 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 POU6F2P78424 691 aaPredicted RBP5.97□□□□□ -1.45
PRKDC-202ENST00000338368 ENPP2Q13822 863 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 MAD2L1BPQ15013 274 aaPredicted RBP5.97□□□□□ -1.45
PRKDC-202ENST00000338368 PON3Q15166 354 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 SYPL1Q16563 259 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 CARTPTQ16568 116 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 DEFB110Q30KQ9 67 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 SLC36A4Q6YBV0 504 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 JAZF1Q86VZ6 243 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 C12orf40Q86WS4 652 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.97□□□□□ -1.45
PRKDC-202ENST00000338368 HORMAD2Q8N7B1 307 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 CHDHQ8NE62 594 aaPredicted RBP5.97□□□□□ -1.45
PRKDC-202ENST00000338368 ZFP90Q8TF47 636 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 TMCO6Q96DC7 493 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 FGF22Q9HCT0 170 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 PDE7BQ9NP56 450 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 TAS2R7Q9NYW3 318 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 MED16Q9Y2X0 877 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 PPIL1Q9Y3C6 166 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 PRSS38A1L453 326 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 PTNP21246 168 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 HTRA4P83105 476 aaPredicted RBP5.97□□□□□ -1.45
PRKDC-202ENST00000338368 PTGES3Q15185 160 aaKnown RBP5.97□□□□□ -1.45
PRKDC-202ENST00000338368 FAM71E1Q6IPT2 247 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 TECPR1Q7Z6L1 1165 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 ZNF433Q8N7K0 673 aaPredicted RBP5.97□□□□□ -1.45
PRKDC-202ENST00000338368 OR2L8Q8NGY9 312 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 TM7SF3Q9NS93 570 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 PCDHGB5Q9Y5G0 923 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 CEPT1Q9Y6K0 416 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 CCRL2O00421 344 aa5.96□□□□□ -1.45
PRKDC-202ENST00000338368 FRS3O43559 492 aa5.96□□□□□ -1.45
PRKDC-202ENST00000338368 JRKO75564 520 aa5.96□□□□□ -1.45
PRKDC-202ENST00000338368 LCKP06239 509 aa5.96□□□□□ -1.45
PRKDC-202ENST00000338368 RABIFP47224 123 aa5.96□□□□□ -1.45
PRKDC-202ENST00000338368 CXCR4P61073 352 aa5.96□□□□□ -1.45
PRKDC-202ENST00000338368 MRPS21P82921 87 aaKnown RBP5.96□□□□□ -1.45
PRKDC-202ENST00000338368 IL18Q14116 193 aa5.96□□□□□ -1.45
PRKDC-202ENST00000338368 ANGPT1Q15389 498 aa5.96□□□□□ -1.45
PRKDC-202ENST00000338368 OR10H5Q8NGA6 315 aa5.96□□□□□ -1.45
PRKDC-202ENST00000338368 ACTRT3Q9BYD9 372 aa5.96□□□□□ -1.45
PRKDC-202ENST00000338368 PBX4Q9BYU1 374 aa5.96□□□□□ -1.45
PRKDC-202ENST00000338368 AASSQ9UDR5 926 aa5.96□□□□□ -1.45
PRKDC-202ENST00000338368 EXOSC1Q9Y3B2 195 aaKnown RBP5.96□□□□□ -1.45
PRKDC-202ENST00000338368 SH3D21A4FU49 640 aa5.96□□□□□ -1.45
PRKDC-202ENST00000338368 APBB3O95704 486 aa5.96□□□□□ -1.45
PRKDC-202ENST00000338368 LDOC1O95751 146 aaPredicted RBP5.96□□□□□ -1.45
PRKDC-202ENST00000338368 DBIP07108 87 aaKnown RBP5.96□□□□□ -1.45
PRKDC-202ENST00000338368 DAPP51397 102 aa5.96□□□□□ -1.45
PRKDC-202ENST00000338368 GABARAPL2P60520 117 aa5.96□□□□□ -1.45
PRKDC-202ENST00000338368 C9orf50Q5SZB4 431 aa5.96□□□□□ -1.45
PRKDC-202ENST00000338368 TTLL10Q6ZVT0 673 aa5.96□□□□□ -1.45
PRKDC-202ENST00000338368 COMMD2Q86X83 199 aa5.96□□□□□ -1.45
PRKDC-202ENST00000338368 CSNK1A1LQ8N752 337 aa5.96□□□□□ -1.45
PRKDC-202ENST00000338368 ZDHHC12Q96GR4 267 aa5.96□□□□□ -1.45
PRKDC-202ENST00000338368 PAPPA2Q9BXP8 1791 aa5.96□□□□□ -1.45
PRKDC-202ENST00000338368 CD1EP15812 388 aa5.96□□□□□ -1.45
PRKDC-202ENST00000338368 MC3RP41968 323 aa5.96□□□□□ -1.45
PRKDC-202ENST00000338368 CSNK1G2P78368 415 aa5.96□□□□□ -1.45
PRKDC-202ENST00000338368 HPS1Q92902 700 aa5.96□□□□□ -1.45
PRKDC-202ENST00000338368 RELTQ969Z4 430 aa5.96□□□□□ -1.45
PRKDC-202ENST00000338368 ACSS1Q9NUB1 689 aaPredicted RBP5.96□□□□□ -1.45
PRKDC-202ENST00000338368 SPATA6Q9NWH7 488 aaPredicted RBP5.96□□□□□ -1.45
PRKDC-202ENST00000338368 GPN3Q9UHW5 284 aaPredicted RBP5.96□□□□□ -1.45
PRKDC-202ENST00000338368 CA5BQ9Y2D0 317 aa5.96□□□□□ -1.45
PRKDC-202ENST00000338368 FABP12A6NFH5 140 aa5.96□□□□□ -1.46
PRKDC-202ENST00000338368 TCF3P15923 654 aa5.96□□□□□ -1.46
PRKDC-202ENST00000338368 CRHBPP24387 322 aa5.96□□□□□ -1.46
PRKDC-202ENST00000338368 CXCR1P25024 350 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms