RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 FAM86B1Q8N7N1 296 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 OR2L8Q8NGY9 312 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 OR5J2Q8NH18 312 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 NXPE2Q96DL1 559 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 CCDC120Q96HB5 630 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 SLC2A11Q9BYW1 496 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 NMNAT1Q9HAN9 279 aaPredicted RBP13.11□□□□□ -0.31
RTN4-202ENST00000337526 CSNK1G1Q9HCP0 422 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 ENPP5Q9UJA9 477 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 C7orf72A4D263 438 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 CDC123O75794 336 aaPredicted RBP13.11□□□□□ -0.31
RTN4-202ENST00000337526 CNMDO75829 334 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 GABRB3P28472 473 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 RNF144AP50876 292 aaPredicted RBP13.11□□□□□ -0.31
RTN4-202ENST00000337526 VSX2P58304 361 aaPredicted RBP13.11□□□□□ -0.31
RTN4-202ENST00000337526 TAS2R38P59533 333 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 PIN1Q13526 163 aaPredicted RBP13.11□□□□□ -0.31
RTN4-202ENST00000337526 TMEM69Q5SWH9 247 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 CCDC28AQ8IWP9 274 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 RBM12BQ8IXT5 1001 aaKnown RBP13.11□□□□□ -0.31
RTN4-202ENST00000337526 GATSQ8NAP1 163 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 OR5M3Q8NGP4 307 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 NDNFQ8TB73 568 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 ARRDC2Q8TBH0 407 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 RANBP3Q9H6Z4 567 aaPredicted RBP13.11□□□□□ -0.31
RTN4-202ENST00000337526 HEBP1Q9NRV9 189 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 SLAMF8Q9P0V8 285 aa13.11□□□□□ -0.31
RTN4-202ENST00000337526 CCL5P13501 91 aa13.1□□□□□ -0.31
RTN4-202ENST00000337526 AK4P27144 223 aaPredicted RBP13.1□□□□□ -0.31
RTN4-202ENST00000337526 SLC5A2P31639 672 aa13.1□□□□□ -0.31
RTN4-202ENST00000337526 RPS21P63220 83 aaKnown RBP13.1□□□□□ -0.31
RTN4-202ENST00000337526 GSTM4Q03013 218 aa13.1□□□□□ -0.31
RTN4-202ENST00000337526 MLIPQ5VWP3 458 aa13.1□□□□□ -0.31
RTN4-202ENST00000337526 KCTD9Q7L273 389 aa13.1□□□□□ -0.31
RTN4-202ENST00000337526 MS4A15Q8N5U1 240 aa13.1□□□□□ -0.31
RTN4-202ENST00000337526 GPR26Q8NDV2 337 aa13.1□□□□□ -0.31
RTN4-202ENST00000337526 CD93Q9NPY3 652 aa13.1□□□□□ -0.31
RTN4-202ENST00000337526 NANSQ9NR45 359 aa13.1□□□□□ -0.31
RTN4-202ENST00000337526 ARID1BQ8NFD5 2236 aaPredicted RBP13.1□□□□□ -0.31
RTN4-202ENST00000337526 FNTBP49356 437 aa13.1□□□□□ -0.31
RTN4-202ENST00000337526 EIF4HQ15056 248 aaKnown RBP13.1□□□□□ -0.31
RTN4-202ENST00000337526 NNATQ16517 81 aa13.1□□□□□ -0.31
RTN4-202ENST00000337526 MARCH8Q5T0T0 291 aa13.1□□□□□ -0.31
RTN4-202ENST00000337526 ARHGAP40Q5TG30 622 aa13.1□□□□□ -0.31
RTN4-202ENST00000337526 CPZQ66K79 652 aa13.1□□□□□ -0.31
RTN4-202ENST00000337526 OR4C11Q6IEV9 310 aa13.1□□□□□ -0.31
RTN4-202ENST00000337526 KCTD18Q6PI47 426 aaPredicted RBP13.1□□□□□ -0.31
RTN4-202ENST00000337526 RETREG3Q86VR2 466 aa13.1□□□□□ -0.31
RTN4-202ENST00000337526 IQCF1Q8N6M8 205 aa13.1□□□□□ -0.31
RTN4-202ENST00000337526 DOK4Q8TEW6 326 aa13.1□□□□□ -0.31
RTN4-202ENST00000337526 EGLN2Q96KS0 407 aa13.1□□□□□ -0.31
RTN4-202ENST00000337526 NTMT1Q9BV86 223 aa13.1□□□□□ -0.31
RTN4-202ENST00000337526 MVB12BQ9H7P6 319 aa13.1□□□□□ -0.31
RTN4-202ENST00000337526 SRA1Q9HD15 236 aaKnown RBP13.1□□□□□ -0.31
RTN4-202ENST00000337526 KLRF1Q9NZS2 232 aa13.1□□□□□ -0.31
RTN4-202ENST00000337526 IGLON5A6NGN9 336 aa13.1□□□□□ -0.31
RTN4-202ENST00000337526 DRGXA6NNA5 263 aa13.1□□□□□ -0.31
RTN4-202ENST00000337526 GPR39O43194 453 aa13.1□□□□□ -0.31
RTN4-202ENST00000337526 RNF13O43567 381 aa13.1□□□□□ -0.31
RTN4-202ENST00000337526 UGDHO60701 494 aa13.1□□□□□ -0.31
RTN4-202ENST00000337526 HCKP08631 526 aa13.1□□□□□ -0.31
RTN4-202ENST00000337526 CA5AP35218 305 aa13.1□□□□□ -0.31
RTN4-202ENST00000337526 ADH7P40394 386 aa13.1□□□□□ -0.31
RTN4-202ENST00000337526 ZNF140P52738 457 aaPredicted RBP13.1□□□□□ -0.31
RTN4-202ENST00000337526 FXYD6P3P58550 94 aa13.1□□□□□ -0.31
RTN4-202ENST00000337526 CRYZQ08257 329 aaKnown RBP13.1□□□□□ -0.31
RTN4-202ENST00000337526 ZNF791Q3KP31 576 aaPredicted RBP13.1□□□□□ -0.31
RTN4-202ENST00000337526 ITPRIPL2Q3MIP1 535 aa13.1□□□□□ -0.31
RTN4-202ENST00000337526 GLT8D1Q68CQ7 371 aa13.1□□□□□ -0.31
RTN4-202ENST00000337526 GDPGP1Q6ZNW5 385 aa13.1□□□□□ -0.31
RTN4-202ENST00000337526 SERPINA11Q86U17 422 aa13.1□□□□□ -0.31
RTN4-202ENST00000337526 OR6N1Q8NGY5 312 aa13.1□□□□□ -0.31
RTN4-202ENST00000337526 MMABQ96EY8 250 aaPredicted RBP13.1□□□□□ -0.31
RTN4-202ENST00000337526 OR4K3Q96R72 315 aa13.1□□□□□ -0.31
RTN4-202ENST00000337526 ACPTQ9BZG2 426 aa13.1□□□□□ -0.31
RTN4-202ENST00000337526 ALKBH4Q9NXW9 302 aa13.1□□□□□ -0.31
RTN4-202ENST00000337526 PRELID1Q9Y255 219 aa13.1□□□□□ -0.31
RTN4-202ENST00000337526 USP3Q9Y6I4 520 aa13.1□□□□□ -0.31
RTN4-202ENST00000337526 GXYLT2A0PJZ3 443 aa13.09□□□□□ -0.31
RTN4-202ENST00000337526 A8MU76 341 aa13.09□□□□□ -0.31
RTN4-202ENST00000337526 PPM1BO75688 479 aa13.09□□□□□ -0.31
RTN4-202ENST00000337526 ZNF806P0C7X5 589 aa13.09□□□□□ -0.31
RTN4-202ENST00000337526 S1PR1P21453 382 aa13.09□□□□□ -0.31
RTN4-202ENST00000337526 ERP29P30040 261 aaKnown RBP13.09□□□□□ -0.31
RTN4-202ENST00000337526 RAB41Q5JT25 222 aa13.09□□□□□ -0.31
RTN4-202ENST00000337526 PAQR9Q6ZVX9 377 aa13.09□□□□□ -0.31
RTN4-202ENST00000337526 SHFQ7M4L6 423 aa13.09□□□□□ -0.31
RTN4-202ENST00000337526 SLC9B2Q86UD5 537 aa13.09□□□□□ -0.31
RTN4-202ENST00000337526 C12orf40Q86WS4 652 aa13.09□□□□□ -0.31
RTN4-202ENST00000337526 OR4N5Q8IXE1 308 aa13.09□□□□□ -0.31
RTN4-202ENST00000337526 KLHDC8AQ8IYD2 350 aa13.09□□□□□ -0.31
RTN4-202ENST00000337526 POGLUT1Q8NBL1 392 aa13.09□□□□□ -0.31
RTN4-202ENST00000337526 OR2L2Q8NH16 312 aa13.09□□□□□ -0.31
RTN4-202ENST00000337526 ZC3H10Q96K80 434 aaKnown RBP13.09□□□□□ -0.31
RTN4-202ENST00000337526 UBXN10Q96LJ8 280 aa13.09□□□□□ -0.31
RTN4-202ENST00000337526 HS6ST2Q96MM7 605 aa13.09□□□□□ -0.31
RTN4-202ENST00000337526 FAM83CQ9BQN1 747 aa13.09□□□□□ -0.31
RTN4-202ENST00000337526 ACTR6Q9GZN1 396 aa13.09□□□□□ -0.31
RTN4-202ENST00000337526 PRTFDC1Q9NRG1 225 aa13.09□□□□□ -0.31
RTN4-202ENST00000337526 PRODH2Q9UF12 536 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms