RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 SLC15A3Q8IY34 581 aa20.09■□□□□ 0.81
TPM1-204ENST00000334895 C10orf111Q8N326 155 aa20.09■□□□□ 0.81
TPM1-204ENST00000334895 RIT1Q92963 219 aa20.09■□□□□ 0.81
TPM1-204ENST00000334895 TMEM125Q96AQ2 219 aa20.09■□□□□ 0.81
TPM1-204ENST00000334895 MAGED4Q96JG8 741 aa20.09■□□□□ 0.81
TPM1-204ENST00000334895 PELOQ9BRX2 385 aaKnown RBP20.09■□□□□ 0.81
TPM1-204ENST00000334895 CADM1Q9BY67 442 aaKnown RBP20.09■□□□□ 0.81
TPM1-204ENST00000334895 TPT1P8Q9HAU6 139 aa20.09■□□□□ 0.81
TPM1-204ENST00000334895 ADAP2Q9NPF8 381 aa20.09■□□□□ 0.81
TPM1-204ENST00000334895 PNO1Q9NRX1 252 aaKnown RBP20.09■□□□□ 0.81
TPM1-204ENST00000334895 GPATCH2Q9NW75 528 aa20.09■□□□□ 0.81
TPM1-204ENST00000334895 NDE1Q9NXR1 346 aa20.09■□□□□ 0.81
TPM1-204ENST00000334895 NTMQ9P121 344 aa20.09■□□□□ 0.81
TPM1-204ENST00000334895 ABCD2Q9UBJ2 740 aa20.09■□□□□ 0.81
TPM1-204ENST00000334895 ZNF639Q9UID6 485 aa20.09■□□□□ 0.81
TPM1-204ENST00000334895 GMEB1Q9Y692 573 aa20.09■□□□□ 0.81
TPM1-204ENST00000334895 AK5Q9Y6K8 562 aa20.09■□□□□ 0.81
TPM1-204ENST00000334895 A8MUA0 341 aa20.08■□□□□ 0.8
TPM1-204ENST00000334895 CLIC1O00299 241 aa20.08■□□□□ 0.8
TPM1-204ENST00000334895 UPK1AO00322 258 aa20.08■□□□□ 0.8
TPM1-204ENST00000334895 CCT3P49368 545 aaKnown RBP20.08■□□□□ 0.8
TPM1-204ENST00000334895 MVDP53602 400 aa20.08■□□□□ 0.8
TPM1-204ENST00000334895 MAP4K2Q12851 820 aa20.08■□□□□ 0.8
TPM1-204ENST00000334895 DNASE1L3Q13609 305 aa20.08■□□□□ 0.8
TPM1-204ENST00000334895 DNAL1Q4LDG9 190 aa20.08■□□□□ 0.8
TPM1-204ENST00000334895 OR2L13Q8N349 312 aa20.08■□□□□ 0.8
TPM1-204ENST00000334895 TRIML2Q8N7C3 387 aa20.08■□□□□ 0.8
TPM1-204ENST00000334895 OR8J3Q8NGG0 315 aa20.08■□□□□ 0.8
TPM1-204ENST00000334895 PNPT1Q8TCS8 783 aaKnown RBP20.08■□□□□ 0.8
TPM1-204ENST00000334895 SFXN5Q8TD22 340 aa20.08■□□□□ 0.8
TPM1-204ENST00000334895 THSD1Q9NS62 852 aa20.08■□□□□ 0.8
TPM1-204ENST00000334895 TCFL5Q9UL49 500 aa20.08■□□□□ 0.8
TPM1-204ENST00000334895 FARSAQ9Y285 508 aaKnown RBP20.08■□□□□ 0.8
TPM1-204ENST00000334895 IGHV3-20A0A0C4DH32 117 aa20.07■□□□□ 0.8
TPM1-204ENST00000334895 C17orf105B2RV13 164 aa20.07■□□□□ 0.8
TPM1-204ENST00000334895 NME4O00746 187 aa20.07■□□□□ 0.8
TPM1-204ENST00000334895 GSC2O15499 205 aa20.07■□□□□ 0.8
TPM1-204ENST00000334895 PLOD3O60568 738 aa20.07■□□□□ 0.8
TPM1-204ENST00000334895 NME6O75414 186 aaPredicted RBP20.07■□□□□ 0.8
TPM1-204ENST00000334895 CBX7O95931 251 aa20.07■□□□□ 0.8
TPM1-204ENST00000334895 DLSTP36957 453 aa20.07■□□□□ 0.8
TPM1-204ENST00000334895 DUSP8Q13202 625 aa20.07■□□□□ 0.8
TPM1-204ENST00000334895 ELAVL1Q15717 326 aaKnown RBP20.07■□□□□ 0.8
TPM1-204ENST00000334895 SPDYE7PQ495Y7 208 aa20.07■□□□□ 0.8
TPM1-204ENST00000334895 SAXO2Q658L1 398 aa20.07■□□□□ 0.8
TPM1-204ENST00000334895 VWA5B2Q8N398 1253 aa20.07■□□□□ 0.8
TPM1-204ENST00000334895 AMER2Q8N7J2 671 aa20.07■□□□□ 0.8
TPM1-204ENST00000334895 C7orf57Q8NEG2 295 aa20.07■□□□□ 0.8
TPM1-204ENST00000334895 GATA6Q92908 595 aa20.07■□□□□ 0.8
TPM1-204ENST00000334895 NXPE2Q96DL1 559 aa20.07■□□□□ 0.8
TPM1-204ENST00000334895 NEURL3Q96EH8 262 aa20.07■□□□□ 0.8
TPM1-204ENST00000334895 CDRT15Q96T59 188 aa20.07■□□□□ 0.8
TPM1-204ENST00000334895 SPAG4Q9NPE6 437 aa20.07■□□□□ 0.8
TPM1-204ENST00000334895 ZCCHC3Q9NUD5 404 aaKnown RBP20.07■□□□□ 0.8
TPM1-204ENST00000334895 TMEM181Q9P2C4 612 aa20.07■□□□□ 0.8
TPM1-204ENST00000334895 GMPR2Q9P2T1 348 aaKnown RBP20.07■□□□□ 0.8
TPM1-204ENST00000334895 PACSIN3Q9UKS6 424 aa20.07■□□□□ 0.8
TPM1-204ENST00000334895 FREM2Q5SZK8 3169 aa20.06■□□□□ 0.8
TPM1-204ENST00000334895 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.06■□□□□ 0.8
TPM1-204ENST00000334895 A0A087WV62 115 aa20.06■□□□□ 0.8
TPM1-204ENST00000334895 C21orf140B9A014 251 aa20.06■□□□□ 0.8
TPM1-204ENST00000334895 EMC8O43402 210 aa20.06■□□□□ 0.8
TPM1-204ENST00000334895 SLITRK5O94991 958 aa20.06■□□□□ 0.8
TPM1-204ENST00000334895 CLPSP04118 112 aa20.06■□□□□ 0.8
TPM1-204ENST00000334895 CD63P08962 238 aa20.06■□□□□ 0.8
TPM1-204ENST00000334895 IFI6P09912 130 aa20.06■□□□□ 0.8
TPM1-204ENST00000334895 FOLR3P41439 243 aa20.06■□□□□ 0.8
TPM1-204ENST00000334895 OR4D2P58180 307 aa20.06■□□□□ 0.8
TPM1-204ENST00000334895 EXOSC7Q15024 291 aaKnown RBP20.06■□□□□ 0.8
TPM1-204ENST00000334895 TGIF1Q15583 401 aa20.06■□□□□ 0.8
TPM1-204ENST00000334895 C6orf120Q7Z4R8 191 aa20.06■□□□□ 0.8
TPM1-204ENST00000334895 METTL21AQ8WXB1 218 aa20.06■□□□□ 0.8
TPM1-204ENST00000334895 C8orf44Q96CB5 159 aa20.06■□□□□ 0.8
TPM1-204ENST00000334895 GIMAP5Q96F15 307 aa20.06■□□□□ 0.8
TPM1-204ENST00000334895 WDR77Q9BQA1 342 aaPredicted RBP20.06■□□□□ 0.8
TPM1-204ENST00000334895 SERHL2Q9H4I8 314 aa20.06■□□□□ 0.8
TPM1-204ENST00000334895 PTGFRNQ9P2B2 879 aa20.06■□□□□ 0.8
TPM1-204ENST00000334895 C19orf53Q9UNZ5 99 aaPredicted RBP20.06■□□□□ 0.8
TPM1-204ENST00000334895 PADI2Q9Y2J8 665 aa20.06■□□□□ 0.8
TPM1-204ENST00000334895 C15orf38-AP3S2A0A0A6YYH1 394 aa20.05■□□□□ 0.8
TPM1-204ENST00000334895 PSMG1O95456 288 aa20.05■□□□□ 0.8
TPM1-204ENST00000334895 DDAH2O95865 285 aa20.05■□□□□ 0.8
TPM1-204ENST00000334895 TNNI3P19429 210 aa20.05■□□□□ 0.8
TPM1-204ENST00000334895 CHI3L1P36222 383 aaPredicted RBP20.05■□□□□ 0.8
TPM1-204ENST00000334895 PGDP52209 483 aa20.05■□□□□ 0.8
TPM1-204ENST00000334895 CASP9P55211 416 aa20.05■□□□□ 0.8
TPM1-204ENST00000334895 FOXK2Q01167 660 aa20.05■□□□□ 0.8
TPM1-204ENST00000334895 TP53BP2Q13625 1128 aa20.05■□□□□ 0.8
TPM1-204ENST00000334895 ZNF267Q14586 743 aaPredicted RBP20.05■□□□□ 0.8
TPM1-204ENST00000334895 SFT2D3Q587I9 215 aa20.05■□□□□ 0.8
TPM1-204ENST00000334895 COX20Q5RI15 118 aa20.05■□□□□ 0.8
TPM1-204ENST00000334895 BNC2Q6ZN30 1099 aaPredicted RBP20.05■□□□□ 0.8
TPM1-204ENST00000334895 ARPINQ7Z6K5 226 aa20.05■□□□□ 0.8
TPM1-204ENST00000334895 CLPTM1LQ96KA5 538 aa20.05■□□□□ 0.8
TPM1-204ENST00000334895 GPR87Q9BY21 358 aa20.05■□□□□ 0.8
TPM1-204ENST00000334895 DDX18Q9NVP1 670 aaKnown RBP20.05■□□□□ 0.8
TPM1-204ENST00000334895 ERVK-19Q9WJR5 959 aa20.05■□□□□ 0.8
TPM1-204ENST00000334895 LOC102723996A0A087X1L8 192 aa20.05■□□□□ 0.8
TPM1-204ENST00000334895 ANKRD65E5RJM6 399 aa20.05■□□□□ 0.8
TPM1-204ENST00000334895 DNAJC8O75937 253 aaPredicted RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms