RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 ZP3P21754 424 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 PBLDP30039 288 aaPredicted RBP11.28□□□□□ -0.6
LIMK2-202ENST00000333611 PREPP48147 710 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 CXCR4P61073 352 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 ACSM2AQ08AH3 577 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 RIN1Q13671 783 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 OPCMLQ14982 345 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 LGALSLQ3ZCW2 172 aaPredicted RBP11.28□□□□□ -0.6
LIMK2-202ENST00000333611 IQCCQ4KMZ1 466 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 CLLU1OSQ5K130 101 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 ACSM2BQ68CK6 577 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 VASNQ6EMK4 673 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 CXorf57Q6NSI4 855 aaKnown RBP11.28□□□□□ -0.6
LIMK2-202ENST00000333611 LRRN1Q6UXK5 716 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 OR52P1PQ8NH57 321 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 IL26Q9NPH9 171 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 A3GALT2U3KPV4 340 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 FAM25EA8MYX2 175 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 CLDN11O75508 207 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 TRBC1P01850 177 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 HMGN1P05114 100 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 LAMP1P11279 417 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.28□□□□□ -0.6
LIMK2-202ENST00000333611 NFATC2Q13469 925 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 XKR6Q5GH73 641 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 ADNP2Q6IQ32 1131 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 RRM2BQ7LG56 351 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 LGI4Q8N135 537 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 OR4K1Q8NGD4 311 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 NR4A3Q92570 626 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 ZNF566Q969W8 418 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 TRIM43Q96BQ3 446 aaPredicted RBP11.28□□□□□ -0.6
LIMK2-202ENST00000333611 SPSB2Q99619 263 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 C1QTNF3Q9BXJ4 246 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 TMEM121BQ9BXQ6 578 aaPredicted RBP11.28□□□□□ -0.6
LIMK2-202ENST00000333611 ACSL6Q9UKU0 697 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 FZD4Q9ULV1 537 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 PCDHB1Q9Y5F3 818 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 TANC1Q9C0D5 1861 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 ZSWIM8A7E2V4 1837 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 C2orf92A0A1B0GVN3 265 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 TMEM88BA6NKF7 163 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 SLC38A8A6NNN8 435 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 NDUFA2O43678 99 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 GIFP27352 417 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 HOXA9P31269 272 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 CCR6P51684 374 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 GINS1Q14691 196 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 SSX1Q16384 188 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 ATP13A5Q4VNC0 1218 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 RTP2Q5QGT7 225 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 ATAT1Q5SQI0 421 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 SFRP4Q6FHJ7 346 aaPredicted RBP11.28□□□□□ -0.6
LIMK2-202ENST00000333611 KIAA1211LQ6NV74 962 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 C11orf88Q6PI97 169 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 SSX6Q7RTT6 188 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 PDLIM5Q96HC4 596 aaKnown RBP11.28□□□□□ -0.6
LIMK2-202ENST00000333611 C7orf50Q9BRJ6 194 aaKnown RBP11.28□□□□□ -0.6
LIMK2-202ENST00000333611 TPT1P8Q9HAU6 139 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 RC3H2Q9HBD1 1191 aaKnown RBP11.28□□□□□ -0.6
LIMK2-202ENST00000333611 C3orf14Q9HBI5 128 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 NDRG4Q9ULP0 352 aaKnown RBP11.28□□□□□ -0.6
LIMK2-202ENST00000333611 OARD1Q9Y530 152 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 CACNG2Q9Y698 323 aa11.28□□□□□ -0.6
LIMK2-202ENST00000333611 C2orf78A6NCI8 922 aa11.27□□□□□ -0.61
LIMK2-202ENST00000333611 OR2AG2A6NM03 316 aa11.27□□□□□ -0.61
LIMK2-202ENST00000333611 SCAMP2O15127 329 aaKnown RBP11.27□□□□□ -0.61
LIMK2-202ENST00000333611 ADAM12O43184 909 aa11.27□□□□□ -0.61
LIMK2-202ENST00000333611 COCHO43405 550 aa11.27□□□□□ -0.61
LIMK2-202ENST00000333611 OR1D2P34982 312 aa11.27□□□□□ -0.61
LIMK2-202ENST00000333611 HECTD3Q5T447 861 aa11.27□□□□□ -0.61
LIMK2-202ENST00000333611 TIGD3Q6B0B8 471 aa11.27□□□□□ -0.61
LIMK2-202ENST00000333611 NOXRED1Q6NXP6 359 aa11.27□□□□□ -0.61
LIMK2-202ENST00000333611 USP45Q70EL2 814 aa11.27□□□□□ -0.61
LIMK2-202ENST00000333611 MRPL10Q7Z7H8 261 aaKnown RBP11.27□□□□□ -0.61
LIMK2-202ENST00000333611 CBLN2Q8IUK8 224 aa11.27□□□□□ -0.61
LIMK2-202ENST00000333611 ZNF527Q8NB42 609 aa11.27□□□□□ -0.61
LIMK2-202ENST00000333611 OR11H7Q8NGC8 314 aa11.27□□□□□ -0.61
LIMK2-202ENST00000333611 EXOSC8Q96B26 276 aaKnown RBP11.27□□□□□ -0.61
LIMK2-202ENST00000333611 FUBP3Q96I24 572 aaKnown RBP eCLIP11.27□□□□□ -0.61
LIMK2-202ENST00000333611 KCTD7Q96MP8 289 aa11.27□□□□□ -0.61
LIMK2-202ENST00000333611 BIN3Q9NQY0 253 aa11.27□□□□□ -0.61
LIMK2-202ENST00000333611 ASB4Q9Y574 426 aa11.27□□□□□ -0.61
LIMK2-202ENST00000333611 OTOFQ9HC10 1997 aa11.27□□□□□ -0.61
LIMK2-202ENST00000333611 A0A1B0GVM2 712 aa11.27□□□□□ -0.61
LIMK2-202ENST00000333611 MGAT4DA6NG13 374 aa11.27□□□□□ -0.61
LIMK2-202ENST00000333611 FAM227AF5H4B4 570 aa11.27□□□□□ -0.61
LIMK2-202ENST00000333611 ZNF623O75123 536 aa11.27□□□□□ -0.61
LIMK2-202ENST00000333611 CXCL14O95715 111 aa11.27□□□□□ -0.61
LIMK2-202ENST00000333611 CD3GP09693 182 aa11.27□□□□□ -0.61
LIMK2-202ENST00000333611 EBLN1P0CF75 366 aa11.27□□□□□ -0.61
LIMK2-202ENST00000333611 CLDN8P56748 225 aa11.27□□□□□ -0.61
LIMK2-202ENST00000333611 SMAD3P84022 425 aaKnown RBP11.27□□□□□ -0.61
LIMK2-202ENST00000333611 SMCO1Q147U7 214 aa11.27□□□□□ -0.61
LIMK2-202ENST00000333611 ZNF367Q7RTV3 350 aa11.27□□□□□ -0.61
LIMK2-202ENST00000333611 WDR48Q8TAF3 677 aa11.27□□□□□ -0.61
LIMK2-202ENST00000333611 NXPE3Q969Y0 559 aa11.27□□□□□ -0.61
LIMK2-202ENST00000333611 ZNF436Q9C0F3 470 aaPredicted RBP11.27□□□□□ -0.61
LIMK2-202ENST00000333611 FOLH1BQ9HBA9 442 aa11.27□□□□□ -0.61
LIMK2-202ENST00000333611 LIPT1Q9Y234 373 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms