RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 CHCHD2Q9Y6H1 151 aaPredicted RBP13.4□□□□□ -0.26
CTHRC1-201ENST00000330295 FAM95CA0A1B0GW59 222 aa13.39□□□□□ -0.27
CTHRC1-201ENST00000330295 FAM234BA2RU67 622 aa13.39□□□□□ -0.27
CTHRC1-201ENST00000330295 FRG2CA6NGY1 282 aa13.39□□□□□ -0.27
CTHRC1-201ENST00000330295 TRIM3O75382 744 aaPredicted RBP13.39□□□□□ -0.27
CTHRC1-201ENST00000330295 LRATO95237 230 aa13.39□□□□□ -0.27
CTHRC1-201ENST00000330295 ENO2P09104 434 aaPredicted RBP13.39□□□□□ -0.27
CTHRC1-201ENST00000330295 IGHV4-31P0DP07 118 aa13.39□□□□□ -0.27
CTHRC1-201ENST00000330295 PHBP35232 272 aa13.39□□□□□ -0.27
CTHRC1-201ENST00000330295 SPRP35270 261 aaPredicted RBP13.39□□□□□ -0.27
CTHRC1-201ENST00000330295 GP5P40197 560 aa13.39□□□□□ -0.27
CTHRC1-201ENST00000330295 HSD17B7P56937 341 aa13.39□□□□□ -0.27
CTHRC1-201ENST00000330295 RAB8AP61006 207 aa13.39□□□□□ -0.27
CTHRC1-201ENST00000330295 TBPL1P62380 186 aa13.39□□□□□ -0.27
CTHRC1-201ENST00000330295 RGS1Q08116 209 aa13.39□□□□□ -0.27
CTHRC1-201ENST00000330295 SLC13A2Q13183 592 aa13.39□□□□□ -0.27
CTHRC1-201ENST00000330295 NAB1Q13506 487 aa13.39□□□□□ -0.27
CTHRC1-201ENST00000330295 EIPR1Q53HC9 387 aa13.39□□□□□ -0.27
CTHRC1-201ENST00000330295 ANKRD34AQ69YU3 496 aa13.39□□□□□ -0.27
CTHRC1-201ENST00000330295 LYPD8Q6UX82 237 aa13.39□□□□□ -0.27
CTHRC1-201ENST00000330295 C17orf64Q86WR6 236 aa13.39□□□□□ -0.27
CTHRC1-201ENST00000330295 MORN4Q8NDC4 146 aa13.39□□□□□ -0.27
CTHRC1-201ENST00000330295 FAM13CQ8NE31 585 aa13.39□□□□□ -0.27
CTHRC1-201ENST00000330295 OR10G3Q8NGC4 313 aa13.39□□□□□ -0.27
CTHRC1-201ENST00000330295 ANKRD7Q92527 254 aa13.39□□□□□ -0.27
CTHRC1-201ENST00000330295 STARD4Q96DR4 205 aa13.39□□□□□ -0.27
CTHRC1-201ENST00000330295 PDLIM5Q96HC4 596 aaKnown RBP13.39□□□□□ -0.27
CTHRC1-201ENST00000330295 SLC39A3Q9BRY0 314 aa13.39□□□□□ -0.27
CTHRC1-201ENST00000330295 CHODLQ9H9P2 273 aa13.39□□□□□ -0.27
CTHRC1-201ENST00000330295 POPDC3Q9HBV1 291 aa13.39□□□□□ -0.27
CTHRC1-201ENST00000330295 ARL15Q9NXU5 204 aa13.39□□□□□ -0.27
CTHRC1-201ENST00000330295 CLCF1Q9UBD9 225 aa13.39□□□□□ -0.27
CTHRC1-201ENST00000330295 GDF2Q9UK05 429 aaPredicted RBP13.39□□□□□ -0.27
CTHRC1-201ENST00000330295 CNOT11Q9UKZ1 510 aaKnown RBP13.39□□□□□ -0.27
CTHRC1-201ENST00000330295 MAPRE3Q9UPY8 281 aa13.39□□□□□ -0.27
CTHRC1-201ENST00000330295 PSAT1Q9Y617 370 aa13.39□□□□□ -0.27
CTHRC1-201ENST00000330295 IKBKGQ9Y6K9 419 aa13.39□□□□□ -0.27
CTHRC1-201ENST00000330295 ALPK2Q86TB3 2170 aa13.39□□□□□ -0.27
CTHRC1-201ENST00000330295 TCRBV9S1A1TA0A576 114 aa13.38□□□□□ -0.27
CTHRC1-201ENST00000330295 ESYT3A0FGR9 886 aa13.38□□□□□ -0.27
CTHRC1-201ENST00000330295 OR1F1O43749 312 aa13.38□□□□□ -0.27
CTHRC1-201ENST00000330295 OR10H2O60403 315 aa13.38□□□□□ -0.27
CTHRC1-201ENST00000330295 IFNA16P05015 189 aa13.38□□□□□ -0.27
CTHRC1-201ENST00000330295 THBDP07204 575 aa13.38□□□□□ -0.27
CTHRC1-201ENST00000330295 DANCRP0C864 163 aa13.38□□□□□ -0.27
CTHRC1-201ENST00000330295 CDH1P12830 882 aa13.38□□□□□ -0.27
CTHRC1-201ENST00000330295 CPN1P15169 458 aa13.38□□□□□ -0.27
CTHRC1-201ENST00000330295 COMPP49747 757 aaPredicted RBP13.38□□□□□ -0.27
CTHRC1-201ENST00000330295 NAGLUP54802 743 aa13.38□□□□□ -0.27
CTHRC1-201ENST00000330295 GRTP1Q5TC63 336 aa13.38□□□□□ -0.27
CTHRC1-201ENST00000330295 SCIMPQ6UWF3 145 aa13.38□□□□□ -0.27
CTHRC1-201ENST00000330295 ZDHHC24Q6UX98 284 aa13.38□□□□□ -0.27
CTHRC1-201ENST00000330295 TBC1D19Q8N5T2 526 aa13.38□□□□□ -0.27
CTHRC1-201ENST00000330295 OR14A16Q8NHC5 309 aa13.38□□□□□ -0.27
CTHRC1-201ENST00000330295 NT5CQ8TCD5 201 aa13.38□□□□□ -0.27
CTHRC1-201ENST00000330295 PTPMT1Q8WUK0 201 aaPredicted RBP13.38□□□□□ -0.27
CTHRC1-201ENST00000330295 IFT81Q8WYA0 676 aa13.38□□□□□ -0.27
CTHRC1-201ENST00000330295 PLPPR2Q96GM1 343 aa13.38□□□□□ -0.27
CTHRC1-201ENST00000330295 KCNS2Q9ULS6 477 aa13.38□□□□□ -0.27
CTHRC1-201ENST00000330295 PDE10AQ9Y233 779 aa13.38□□□□□ -0.27
CTHRC1-201ENST00000330295 MAGED1Q9Y5V3 778 aaPredicted RBP13.38□□□□□ -0.27
CTHRC1-201ENST00000330295 SLC35F4A4IF30 521 aa13.37□□□□□ -0.27
CTHRC1-201ENST00000330295 FAM159BA6NKW6 160 aa13.37□□□□□ -0.27
CTHRC1-201ENST00000330295 H0Y3Z8 333 aa13.37□□□□□ -0.27
CTHRC1-201ENST00000330295 SSX4O60224 188 aa13.37□□□□□ -0.27
CTHRC1-201ENST00000330295 ACTL6AO96019 429 aa13.37□□□□□ -0.27
CTHRC1-201ENST00000330295 KCNJ5P48544 419 aa13.37□□□□□ -0.27
CTHRC1-201ENST00000330295 HNRNPFP52597 415 aaKnown RBP13.37□□□□□ -0.27
CTHRC1-201ENST00000330295 TIAL1Q01085 375 aaKnown RBP eCLIP13.37□□□□□ -0.27
CTHRC1-201ENST00000330295 VWA1Q6PCB0 445 aa13.37□□□□□ -0.27
CTHRC1-201ENST00000330295 AGTRAPQ6RW13 159 aa13.37□□□□□ -0.27
CTHRC1-201ENST00000330295 FRA10AC1Q70Z53 315 aa13.37□□□□□ -0.27
CTHRC1-201ENST00000330295 OR10H5Q8NGA6 315 aa13.37□□□□□ -0.27
CTHRC1-201ENST00000330295 ALKBH8Q96BT7 664 aaKnown RBP13.37□□□□□ -0.27
CTHRC1-201ENST00000330295 PGM2Q96G03 612 aa13.37□□□□□ -0.27
CTHRC1-201ENST00000330295 HAUS8Q9BT25 410 aa13.37□□□□□ -0.27
CTHRC1-201ENST00000330295 OPN3Q9H1Y3 402 aaPredicted RBP13.37□□□□□ -0.27
CTHRC1-201ENST00000330295 CTNNAL1Q9UBT7 734 aa13.37□□□□□ -0.27
CTHRC1-201ENST00000330295 C15orf41Q9Y2V0 281 aa13.37□□□□□ -0.27
CTHRC1-201ENST00000330295 PRR14LQ5THK1 2151 aa13.37□□□□□ -0.27
CTHRC1-201ENST00000330295 SYNDIG1LA6NDD5 238 aa13.36□□□□□ -0.27
CTHRC1-201ENST00000330295 CRHP06850 196 aa13.36□□□□□ -0.27
CTHRC1-201ENST00000330295 CREB1P16220 341 aa13.36□□□□□ -0.27
CTHRC1-201ENST00000330295 STMN1P16949 149 aa13.36□□□□□ -0.27
CTHRC1-201ENST00000330295 ZNF37AP17032 561 aaPredicted RBP13.36□□□□□ -0.27
CTHRC1-201ENST00000330295 CHMP24386 653 aa13.36□□□□□ -0.27
CTHRC1-201ENST00000330295 HNF4AP41235 474 aa13.36□□□□□ -0.27
CTHRC1-201ENST00000330295 SLC6A12P48065 614 aa13.36□□□□□ -0.27
CTHRC1-201ENST00000330295 TAS2R39P59534 338 aa13.36□□□□□ -0.27
CTHRC1-201ENST00000330295 NAE1Q13564 534 aa13.36□□□□□ -0.27
CTHRC1-201ENST00000330295 TOMM20Q15388 145 aa13.36□□□□□ -0.27
CTHRC1-201ENST00000330295 TRADDQ15628 312 aa13.36□□□□□ -0.27
CTHRC1-201ENST00000330295 MIDNQ504T8 468 aa13.36□□□□□ -0.27
CTHRC1-201ENST00000330295 TBCELQ5QJ74 424 aa13.36□□□□□ -0.27
CTHRC1-201ENST00000330295 FAM166AQ6J272 317 aa13.36□□□□□ -0.27
CTHRC1-201ENST00000330295 ADAM5Q6NVV9 412 aa13.36□□□□□ -0.27
CTHRC1-201ENST00000330295 CLNKQ7Z7G1 428 aa13.36□□□□□ -0.27
CTHRC1-201ENST00000330295 ADAMTSL2Q86TH1 951 aa13.36□□□□□ -0.27
CTHRC1-201ENST00000330295 IFT20Q8IY31 132 aa13.36□□□□□ -0.27
CTHRC1-201ENST00000330295 DND1Q8IYX4 353 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms