RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 EBPLQ9BY08 206 aa25.49■■□□□ 1.67
ATPAF1-201ENST00000329231 TNFRSF12AQ9NP84 129 aa25.49■■□□□ 1.67
ATPAF1-201ENST00000329231 PFDN4Q9NQP4 134 aa25.49■■□□□ 1.67
ATPAF1-201ENST00000329231 MAT2BQ9NZL9 334 aa25.49■■□□□ 1.67
ATPAF1-201ENST00000329231 SENP1Q9P0U3 644 aa25.49■■□□□ 1.67
ATPAF1-201ENST00000329231 SH3BGRL2Q9UJC5 107 aa25.49■■□□□ 1.67
ATPAF1-201ENST00000329231 CFL2Q9Y281 166 aa25.49■■□□□ 1.67
ATPAF1-201ENST00000329231 CAPN14A8MX76 684 aa25.48■■□□□ 1.67
ATPAF1-201ENST00000329231 G3V3Y1 287 aa25.48■■□□□ 1.67
ATPAF1-201ENST00000329231 RGS16O15492 202 aaPredicted RBP25.48■■□□□ 1.67
ATPAF1-201ENST00000329231 ZG16O60844 167 aa25.48■■□□□ 1.67
ATPAF1-201ENST00000329231 RSL1D1O76021 490 aaKnown RBP25.48■■□□□ 1.67
ATPAF1-201ENST00000329231 CCL3P10147 92 aa25.48■■□□□ 1.67
ATPAF1-201ENST00000329231 ABOP16442 354 aa25.48■■□□□ 1.67
ATPAF1-201ENST00000329231 S1PR1P21453 382 aa25.48■■□□□ 1.67
ATPAF1-201ENST00000329231 ALDH3A1P30838 453 aa25.48■■□□□ 1.67
ATPAF1-201ENST00000329231 PTGER1P34995 402 aa25.48■■□□□ 1.67
ATPAF1-201ENST00000329231 NR0B1P51843 470 aaKnown RBP25.48■■□□□ 1.67
ATPAF1-201ENST00000329231 PPIAP62937 165 aaKnown RBP25.48■■□□□ 1.67
ATPAF1-201ENST00000329231 ZNF763Q0D2J5 394 aa25.48■■□□□ 1.67
ATPAF1-201ENST00000329231 C3AR1Q16581 482 aa25.48■■□□□ 1.67
ATPAF1-201ENST00000329231 CEP85LQ5SZL2 805 aa25.48■■□□□ 1.67
ATPAF1-201ENST00000329231 MAMDC2Q7Z304 686 aaPredicted RBP25.48■■□□□ 1.67
ATPAF1-201ENST00000329231 SLC22A16Q86VW1 577 aa25.48■■□□□ 1.67
ATPAF1-201ENST00000329231 C17orf47Q8NEP4 570 aa25.48■■□□□ 1.67
ATPAF1-201ENST00000329231 FAM76AQ8TAV0 307 aa25.48■■□□□ 1.67
ATPAF1-201ENST00000329231 TCP10LQ8TDR4 215 aa25.48■■□□□ 1.67
ATPAF1-201ENST00000329231 PAQR8Q8TEZ7 354 aa25.48■■□□□ 1.67
ATPAF1-201ENST00000329231 SH2D2AQ9NP31 389 aa25.48■■□□□ 1.67
ATPAF1-201ENST00000329231 GIMAP4Q9NUV9 329 aa25.48■■□□□ 1.67
ATPAF1-201ENST00000329231 SLC17A7Q9P2U7 560 aa25.48■■□□□ 1.67
ATPAF1-201ENST00000329231 DIDO1Q9BTC0 2240 aaKnown RBP25.48■■□□□ 1.67
ATPAF1-201ENST00000329231 A0A0G2JMM0 328 aa25.47■■□□□ 1.67
ATPAF1-201ENST00000329231 A0A1W2PPB8 328 aa25.47■■□□□ 1.67
ATPAF1-201ENST00000329231 A0A1W2PRS3 328 aa25.47■■□□□ 1.67
ATPAF1-201ENST00000329231 PINLYPA6NC86 204 aa25.47■■□□□ 1.67
ATPAF1-201ENST00000329231 KIR3DP1A8MWS1 328 aa25.47■■□□□ 1.67
ATPAF1-201ENST00000329231 AZIN1O14977 448 aa25.47■■□□□ 1.67
ATPAF1-201ENST00000329231 HSF1Q00613 529 aa25.47■■□□□ 1.67
ATPAF1-201ENST00000329231 MGAT2Q10469 447 aa25.47■■□□□ 1.67
ATPAF1-201ENST00000329231 CMPK2Q5EBM0 449 aa25.47■■□□□ 1.67
ATPAF1-201ENST00000329231 BEND6Q5SZJ8 279 aaPredicted RBP25.47■■□□□ 1.67
ATPAF1-201ENST00000329231 CLEC6AQ6EIG7 209 aa25.47■■□□□ 1.67
ATPAF1-201ENST00000329231 FAM180BQ6P0A1 224 aa25.47■■□□□ 1.67
ATPAF1-201ENST00000329231 FAM111BQ6SJ93 734 aa25.47■■□□□ 1.67
ATPAF1-201ENST00000329231 LRIG3Q6UXM1 1119 aa25.47■■□□□ 1.67
ATPAF1-201ENST00000329231 FAM13CQ8NE31 585 aa25.47■■□□□ 1.67
ATPAF1-201ENST00000329231 ADIPOR1Q96A54 375 aa25.47■■□□□ 1.67
ATPAF1-201ENST00000329231 METTL2AQ96IZ6 378 aaKnown RBP25.47■■□□□ 1.67
ATPAF1-201ENST00000329231 TTTY12Q9BZ98 90 aa25.47■■□□□ 1.67
ATPAF1-201ENST00000329231 EHD3Q9NZN3 535 aa25.47■■□□□ 1.67
ATPAF1-201ENST00000329231 SLC28A1O00337 649 aa25.46■■□□□ 1.67
ATPAF1-201ENST00000329231 NPHS1O60500 1241 aa25.46■■□□□ 1.67
ATPAF1-201ENST00000329231 CDC40O60508 579 aaKnown RBP eCLIP25.46■■□□□ 1.67
ATPAF1-201ENST00000329231 CLDN1O95832 211 aa25.46■■□□□ 1.67
ATPAF1-201ENST00000329231 NRG3P56975 720 aa25.46■■□□□ 1.67
ATPAF1-201ENST00000329231 DUSP2Q05923 314 aa25.46■■□□□ 1.67
ATPAF1-201ENST00000329231 ADCY4Q8NFM4 1077 aa25.46■■□□□ 1.67
ATPAF1-201ENST00000329231 OR52N2Q8NGI0 321 aa25.46■■□□□ 1.67
ATPAF1-201ENST00000329231 EXOSC8Q96B26 276 aaKnown RBP25.46■■□□□ 1.67
ATPAF1-201ENST00000329231 CTHRC1Q96CG8 243 aa25.46■■□□□ 1.67
ATPAF1-201ENST00000329231 IL1RL2Q9HB29 575 aa25.46■■□□□ 1.67
ATPAF1-201ENST00000329231 CNIH4Q9P003 139 aa25.46■■□□□ 1.67
ATPAF1-201ENST00000329231 BCAP29Q9UHQ4 241 aa25.46■■□□□ 1.67
ATPAF1-201ENST00000329231 ZNF639Q9UID6 485 aa25.46■■□□□ 1.67
ATPAF1-201ENST00000329231 TINAGQ9UJW2 476 aa25.46■■□□□ 1.67
ATPAF1-201ENST00000329231 ENTPD4Q9Y227 616 aa25.46■■□□□ 1.67
ATPAF1-201ENST00000329231 WBP11Q9Y2W2 641 aaKnown RBP25.46■■□□□ 1.67
ATPAF1-201ENST00000329231 GLSO94925 669 aaPredicted RBP25.45■■□□□ 1.66
ATPAF1-201ENST00000329231 CHEK2O96017 543 aa25.45■■□□□ 1.66
ATPAF1-201ENST00000329231 DNASE1L1P49184 302 aa25.45■■□□□ 1.66
ATPAF1-201ENST00000329231 TMED10P49755 219 aaKnown RBP25.45■■□□□ 1.66
ATPAF1-201ENST00000329231 NTRK2Q16620 822 aa25.45■■□□□ 1.66
ATPAF1-201ENST00000329231 PAOXQ6QHF9 649 aa25.45■■□□□ 1.66
ATPAF1-201ENST00000329231 CHERPQ8IWX8 916 aaKnown RBP25.45■■□□□ 1.66
ATPAF1-201ENST00000329231 CCDC116Q8IYX3 515 aa25.45■■□□□ 1.66
ATPAF1-201ENST00000329231 FBXW8Q8N3Y1 598 aa25.45■■□□□ 1.66
ATPAF1-201ENST00000329231 MECRQ9BV79 373 aa25.45■■□□□ 1.66
ATPAF1-201ENST00000329231 EML4Q9HC35 981 aaKnown RBP25.45■■□□□ 1.66
ATPAF1-201ENST00000329231 SLC35C2Q9NQQ7 365 aa25.45■■□□□ 1.66
ATPAF1-201ENST00000329231 FAM166BA8MTA8 275 aa25.44■■□□□ 1.66
ATPAF1-201ENST00000329231 PRRG2O14669 202 aa25.44■■□□□ 1.66
ATPAF1-201ENST00000329231 TP53I11O14683 189 aa25.44■■□□□ 1.66
ATPAF1-201ENST00000329231 RGS14O43566 566 aa25.44■■□□□ 1.66
ATPAF1-201ENST00000329231 ESRRAP11474 423 aaPredicted RBP25.44■■□□□ 1.66
ATPAF1-201ENST00000329231 CREB1P16220 341 aa25.44■■□□□ 1.66
ATPAF1-201ENST00000329231 DDCP20711 480 aa25.44■■□□□ 1.66
ATPAF1-201ENST00000329231 GPX3P22352 226 aa25.44■■□□□ 1.66
ATPAF1-201ENST00000329231 PIGAP37287 484 aa25.44■■□□□ 1.66
ATPAF1-201ENST00000329231 C2orf80Q0P641 193 aa25.44■■□□□ 1.66
ATPAF1-201ENST00000329231 EXOSC7Q15024 291 aaKnown RBP25.44■■□□□ 1.66
ATPAF1-201ENST00000329231 RNF165Q6ZSG1 346 aa25.44■■□□□ 1.66
ATPAF1-201ENST00000329231 OR10G3Q8NGC4 313 aa25.44■■□□□ 1.66
ATPAF1-201ENST00000329231 CDC26Q8NHZ8 85 aa25.44■■□□□ 1.66
ATPAF1-201ENST00000329231 ZNF675Q8TD23 568 aa25.44■■□□□ 1.66
ATPAF1-201ENST00000329231 CCDC120Q96HB5 630 aa25.44■■□□□ 1.66
ATPAF1-201ENST00000329231 DEFB127Q9H1M4 99 aa25.44■■□□□ 1.66
ATPAF1-201ENST00000329231 ZDHHC11Q9H8X9 412 aa25.44■■□□□ 1.66
ATPAF1-201ENST00000329231 PLSCR2Q9NRY7 297 aa25.44■■□□□ 1.66
ATPAF1-201ENST00000329231 PRODH2Q9UF12 536 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms