RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 SERPINB7O75635 380 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 ETHE1O95571 254 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 BMP2P12643 396 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 SOAT1P35610 550 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 CCT3P49368 545 aaKnown RBP4.83□□□□□ -1.64
LRIT3-201ENST00000327908 SSR4P51571 173 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 PGDP52209 483 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 PNLIPRP2P54317 469 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 DIO3P55073 304 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 POU6F2P78424 691 aaPredicted RBP4.83□□□□□ -1.64
LRIT3-201ENST00000327908 MXRA7P84157 204 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 FAM174BQ3ZCQ3 159 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 TCHHL1Q5QJ38 904 aaPredicted RBP4.83□□□□□ -1.64
LRIT3-201ENST00000327908 AGAP7PQ5VUJ5 663 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 SLC30A6Q6NXT4 461 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 ISLR2Q6UXK2 745 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 PPP1R32Q7Z5V6 425 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 PGAM4Q8N0Y7 254 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 ZADH2Q8N4Q0 377 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 RFWD2Q8NHY2 731 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 ADAMTS17Q8TE56 1095 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 LZICQ8WZA0 190 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 LCORQ96JN0 433 aaPredicted RBP4.83□□□□□ -1.64
LRIT3-201ENST00000327908 AGAP4Q96P64 663 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 C1orf50Q9BV19 199 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 PIGUQ9H490 435 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.83□□□□□ -1.64
LRIT3-201ENST00000327908 KLHL28Q9NXS3 571 aa4.83□□□□□ -1.64
LRIT3-201ENST00000327908 A0A087WZY1 265 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 RNF103-CHMP3A0A140T963 221 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 GABRR3A8MPY1 467 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 PPP6CO00743 305 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 CIB2O75838 187 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 CEACAM4O75871 244 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 COX6A1P12074 109 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 CD46P15529 392 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 PTPRBP23467 1997 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 IL12BP29460 328 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 SLC6A8P48029 635 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 MAP2K6P52564 334 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 CRISP3P54108 245 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 EEF1A1P68104 462 aaKnown RBP4.82□□□□□ -1.64
LRIT3-201ENST00000327908 EEF1A2Q05639 463 aaKnown RBP4.82□□□□□ -1.64
LRIT3-201ENST00000327908 PCOLCEQ15113 449 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.82□□□□□ -1.64
LRIT3-201ENST00000327908 GLYR1Q49A26 553 aaPredicted RBP4.82□□□□□ -1.64
LRIT3-201ENST00000327908 EEF1A1P5Q5VTE0 462 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 AP1ARQ63HQ0 302 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 SAXO2Q658L1 398 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 ANKRD46Q86W74 232 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 PROSER1Q86XN7 944 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 C11orf65Q8NCR3 313 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 CHDHQ8NE62 594 aaPredicted RBP4.82□□□□□ -1.64
LRIT3-201ENST00000327908 NUP43Q8NFH3 380 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 CTHRC1Q96CG8 243 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 ELP4Q96EB1 424 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 MOCOSQ96EN8 888 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 IMMP1LQ96LU5 166 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 C3orf30Q96M34 536 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 OR52B2Q96RD2 323 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 TMEM38AQ9H6F2 299 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 WDR55Q9H6Y2 383 aaPredicted RBP4.82□□□□□ -1.64
LRIT3-201ENST00000327908 A4GALTQ9NPC4 353 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 ZCCHC3Q9NUD5 404 aaKnown RBP4.82□□□□□ -1.64
LRIT3-201ENST00000327908 MAT2BQ9NZL9 334 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 CTSFQ9UBX1 484 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 RPS6KA6Q9UK32 745 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 FBXL4Q9UKA2 621 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 SLC35A3Q9Y2D2 325 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 HEMK1Q9Y5R4 338 aaPredicted RBP4.82□□□□□ -1.64
LRIT3-201ENST00000327908 MAU2Q9Y6X3 613 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 TRAV17A0A0B4J275 112 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 A0A0G2JPF8 293 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 LOC101059948A0A1B0GTJ6 334 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 A0A1W2PQD3 144 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 ANKRD33BA6NCL7 494 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 KRT87PA6NCN2 255 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 CFAP73A6NFT4 308 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 ZNF860A6NHJ4 632 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 HNRNPCL2B2RXH8 293 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 HNRNPCL3B7ZW38 293 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 RTCAO00442 366 aaKnown RBP4.82□□□□□ -1.64
LRIT3-201ENST00000327908 SOCS6O14544 535 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 AKAP10O43572 662 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 FGF17O60258 216 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 KLF7O75840 302 aaPredicted RBP4.82□□□□□ -1.64
LRIT3-201ENST00000327908 NKX2-2O95096 273 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 SNX4O95219 450 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 TBX6O95947 436 aaPredicted RBP4.82□□□□□ -1.64
LRIT3-201ENST00000327908 HNRNPCL4P0DMR1 293 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 ETS2P15036 469 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 VEZF1Q14119 521 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.82□□□□□ -1.64
LRIT3-201ENST00000327908 BTBD16Q32M84 506 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 PIGGQ5H8A4 983 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 C6orf10Q5SRN2 563 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 RPUSD3Q6P087 351 aaKnown RBP4.82□□□□□ -1.64
LRIT3-201ENST00000327908 C5orf46Q6UWT4 87 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 LRRC74BQ6ZQY2 392 aa4.82□□□□□ -1.64
LRIT3-201ENST00000327908 TIPARPQ7Z3E1 657 aaKnown RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms