RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 ST13P4Q8IZP2 240 aaPredicted RBP16.9■□□□□ 0.3
SYNE4-201ENST00000324444 BMPERQ8N8U9 685 aa16.9■□□□□ 0.3
SYNE4-201ENST00000324444 OR52E4Q8NGH9 312 aa16.9■□□□□ 0.3
SYNE4-201ENST00000324444 WDR36Q8NI36 951 aaKnown RBP16.9■□□□□ 0.3
SYNE4-201ENST00000324444 ZNF675Q8TD23 568 aa16.9■□□□□ 0.3
SYNE4-201ENST00000324444 WDR60Q8WVS4 1066 aa16.9■□□□□ 0.3
SYNE4-201ENST00000324444 UCN3Q969E3 161 aa16.9■□□□□ 0.3
SYNE4-201ENST00000324444 ELP4Q96EB1 424 aa16.9■□□□□ 0.3
SYNE4-201ENST00000324444 AURKBQ96GD4 344 aaPredicted RBP16.9■□□□□ 0.3
SYNE4-201ENST00000324444 ASPSCR1Q9BZE9 553 aa16.9■□□□□ 0.3
SYNE4-201ENST00000324444 TGIF2Q9GZN2 237 aa16.9■□□□□ 0.3
SYNE4-201ENST00000324444 TMEM38AQ9H6F2 299 aa16.9■□□□□ 0.3
SYNE4-201ENST00000324444 DCLRE1BQ9H816 532 aa16.9■□□□□ 0.3
SYNE4-201ENST00000324444 SIRT3Q9NTG7 399 aaPredicted RBP16.9■□□□□ 0.3
SYNE4-201ENST00000324444 ZCCHC3Q9NUD5 404 aaKnown RBP16.9■□□□□ 0.3
SYNE4-201ENST00000324444 NTMQ9P121 344 aa16.9■□□□□ 0.3
SYNE4-201ENST00000324444 ZNF451Q9Y4E5 1061 aa16.9■□□□□ 0.3
SYNE4-201ENST00000324444 PCDHGA8Q9Y5G5 932 aa16.9■□□□□ 0.3
SYNE4-201ENST00000324444 CCDC187A0A096LP49 1063 aa16.89■□□□□ 0.3
SYNE4-201ENST00000324444 FGF17O60258 216 aa16.89■□□□□ 0.3
SYNE4-201ENST00000324444 DNAJB6O75190 326 aa16.89■□□□□ 0.3
SYNE4-201ENST00000324444 AGR2O95994 175 aa16.89■□□□□ 0.3
SYNE4-201ENST00000324444 ALBP02768 609 aa16.89■□□□□ 0.3
SYNE4-201ENST00000324444 NTRK1P04629 796 aa16.89■□□□□ 0.3
SYNE4-201ENST00000324444 KLK3P07288 261 aaPredicted RBP16.89■□□□□ 0.3
SYNE4-201ENST00000324444 C8orf89P0DMQ9 161 aa16.89■□□□□ 0.3
SYNE4-201ENST00000324444 RBMS1P29558 406 aaKnown RBP16.89■□□□□ 0.3
SYNE4-201ENST00000324444 CDK9P50750 372 aaKnown RBP16.89■□□□□ 0.3
SYNE4-201ENST00000324444 AP2B1P63010 937 aa16.89■□□□□ 0.3
SYNE4-201ENST00000324444 IGLV3-21P80748 117 aaPredicted RBP16.89■□□□□ 0.3
SYNE4-201ENST00000324444 SELPLGQ14242 412 aa16.89■□□□□ 0.3
SYNE4-201ENST00000324444 INTS11Q5TA45 600 aaKnown RBP16.89■□□□□ 0.3
SYNE4-201ENST00000324444 PWWP2BQ6NUJ5 590 aa16.89■□□□□ 0.3
SYNE4-201ENST00000324444 IGF2-ASQ6U949 168 aa16.89■□□□□ 0.3
SYNE4-201ENST00000324444 C11orf65Q8NCR3 313 aa16.89■□□□□ 0.3
SYNE4-201ENST00000324444 NAF1Q96HR8 494 aaKnown RBP16.89■□□□□ 0.3
SYNE4-201ENST00000324444 DGAT2Q96PD7 388 aa16.89■□□□□ 0.3
SYNE4-201ENST00000324444 EPS8L2Q9H6S3 715 aa16.89■□□□□ 0.3
SYNE4-201ENST00000324444 GORASP2Q9H8Y8 452 aa16.89■□□□□ 0.3
SYNE4-201ENST00000324444 THSD1Q9NS62 852 aa16.89■□□□□ 0.3
SYNE4-201ENST00000324444 DDX18Q9NVP1 670 aaKnown RBP16.89■□□□□ 0.3
SYNE4-201ENST00000324444 OCIAD1Q9NX40 245 aa16.89■□□□□ 0.3
SYNE4-201ENST00000324444 SLC39A1Q9NY26 324 aa16.89■□□□□ 0.3
SYNE4-201ENST00000324444 FAF1Q9UNN5 650 aaPredicted RBP16.89■□□□□ 0.3
SYNE4-201ENST00000324444 ERVK-11Q9UQG0 969 aa16.89■□□□□ 0.3
SYNE4-201ENST00000324444 MAU2Q9Y6X3 613 aa16.89■□□□□ 0.3
SYNE4-201ENST00000324444 FER1L5A0AVI2 2057 aa16.89■□□□□ 0.29
SYNE4-201ENST00000324444 ATRXP46100 2492 aa16.89■□□□□ 0.29
SYNE4-201ENST00000324444 PMS2P1A4D2B8 440 aa16.89■□□□□ 0.29
SYNE4-201ENST00000324444 DUXAA6NLW8 204 aa16.89■□□□□ 0.29
SYNE4-201ENST00000324444 FAM227AF5H4B4 570 aa16.89■□□□□ 0.29
SYNE4-201ENST00000324444 B4GALT2O60909 372 aa16.89■□□□□ 0.29
SYNE4-201ENST00000324444 LDB3O75112 727 aa16.89■□□□□ 0.29
SYNE4-201ENST00000324444 UMPSP11172 480 aa16.89■□□□□ 0.29
SYNE4-201ENST00000324444 BMP2P12643 396 aa16.89■□□□□ 0.29
SYNE4-201ENST00000324444 NT5EP21589 574 aa16.89■□□□□ 0.29
SYNE4-201ENST00000324444 OR1D4P47884 311 aa16.89■□□□□ 0.29
SYNE4-201ENST00000324444 MAT1AQ00266 395 aaKnown RBP16.89■□□□□ 0.29
SYNE4-201ENST00000324444 ZNF630Q2M218 657 aaPredicted RBP16.89■□□□□ 0.29
SYNE4-201ENST00000324444 VMACQ2NL98 169 aa16.89■□□□□ 0.29
SYNE4-201ENST00000324444 NKAIN1Q4KMZ8 207 aa16.89■□□□□ 0.29
SYNE4-201ENST00000324444 GCNT6Q5T4J0 391 aa16.89■□□□□ 0.29
SYNE4-201ENST00000324444 DCAF12Q5T6F0 453 aa16.89■□□□□ 0.29
SYNE4-201ENST00000324444 GLYATQ6IB77 296 aa16.89■□□□□ 0.29
SYNE4-201ENST00000324444 ZCCHC12Q6PEW1 402 aa16.89■□□□□ 0.29
SYNE4-201ENST00000324444 GPR155Q7Z3F1 870 aa16.89■□□□□ 0.29
SYNE4-201ENST00000324444 ZNF248Q8NDW4 579 aa16.89■□□□□ 0.29
SYNE4-201ENST00000324444 BHLHE22Q8NFJ8 381 aaPredicted RBP16.89■□□□□ 0.29
SYNE4-201ENST00000324444 FKBP10Q96AY3 582 aa16.89■□□□□ 0.29
SYNE4-201ENST00000324444 ANKRD9Q96BM1 317 aaPredicted RBP16.89■□□□□ 0.29
SYNE4-201ENST00000324444 RSRC1Q96IZ7 334 aaKnown RBP16.89■□□□□ 0.29
SYNE4-201ENST00000324444 SLC35G5Q96KT7 338 aa16.89■□□□□ 0.29
SYNE4-201ENST00000324444 NSMCE2Q96MF7 247 aa16.89■□□□□ 0.29
SYNE4-201ENST00000324444 EFHD1Q9BUP0 239 aa16.89■□□□□ 0.29
SYNE4-201ENST00000324444 ASCL3Q9NQ33 180 aa16.89■□□□□ 0.29
SYNE4-201ENST00000324444 PACSIN3Q9UKS6 424 aa16.89■□□□□ 0.29
SYNE4-201ENST00000324444 SCN3AQ9NY46 2000 aa16.88■□□□□ 0.29
SYNE4-201ENST00000324444 IGLV3-12A0A075B6K2 115 aa16.88■□□□□ 0.29
SYNE4-201ENST00000324444 WASHC1A8K0Z3 465 aa16.88■□□□□ 0.29
SYNE4-201ENST00000324444 PLOD3O60568 738 aa16.88■□□□□ 0.29
SYNE4-201ENST00000324444 COQ9O75208 318 aa16.88■□□□□ 0.29
SYNE4-201ENST00000324444 GGT1P19440 569 aa16.88■□□□□ 0.29
SYNE4-201ENST00000324444 STT3AP46977 705 aa16.88■□□□□ 0.29
SYNE4-201ENST00000324444 KHKP50053 298 aa16.88■□□□□ 0.29
SYNE4-201ENST00000324444 GZMMP51124 257 aa16.88■□□□□ 0.29
SYNE4-201ENST00000324444 POLE2P56282 527 aa16.88■□□□□ 0.29
SYNE4-201ENST00000324444 DSTNP60981 165 aa16.88■□□□□ 0.29
SYNE4-201ENST00000324444 MS4A2Q01362 244 aa16.88■□□□□ 0.29
SYNE4-201ENST00000324444 RHDQ02161 417 aa16.88■□□□□ 0.29
SYNE4-201ENST00000324444 MAP4K2Q12851 820 aa16.88■□□□□ 0.29
SYNE4-201ENST00000324444 TMEM164Q5U3C3 297 aa16.88■□□□□ 0.29
SYNE4-201ENST00000324444 FAM180BQ6P0A1 224 aa16.88■□□□□ 0.29
SYNE4-201ENST00000324444 RAB11FIP2Q7L804 512 aa16.88■□□□□ 0.29
SYNE4-201ENST00000324444 SPATA24Q86W54 205 aa16.88■□□□□ 0.29
SYNE4-201ENST00000324444 RNF130Q86XS8 419 aa16.88■□□□□ 0.29
SYNE4-201ENST00000324444 SPACA3Q8IXA5 215 aa16.88■□□□□ 0.29
SYNE4-201ENST00000324444 OR4N5Q8IXE1 308 aa16.88■□□□□ 0.29
SYNE4-201ENST00000324444 EID3Q8N140 333 aa16.88■□□□□ 0.29
SYNE4-201ENST00000324444 METTL27Q8N6F8 245 aaPredicted RBP16.88■□□□□ 0.29
SYNE4-201ENST00000324444 FAM156AQ8NDB6 213 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms