RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 ANGPT4Q9Y264 503 aa17.28■□□□□ 0.36
USP39-201ENST00000323701 EMC8O43402 210 aa17.28■□□□□ 0.36
USP39-201ENST00000323701 SIGLEC6O43699 453 aa17.28■□□□□ 0.36
USP39-201ENST00000323701 HSPA13P48723 471 aa17.28■□□□□ 0.36
USP39-201ENST00000323701 CLCN2P51788 898 aa17.28■□□□□ 0.36
USP39-201ENST00000323701 NR1D2Q14995 579 aa17.28■□□□□ 0.36
USP39-201ENST00000323701 PERM1Q5SV97 790 aa17.28■□□□□ 0.36
USP39-201ENST00000323701 ZDHHC13Q8IUH4 622 aa17.28■□□□□ 0.36
USP39-201ENST00000323701 TTC29Q8NA56 475 aaPredicted RBP17.28■□□□□ 0.36
USP39-201ENST00000323701 GPR32P1Q8NGA4 272 aa17.28■□□□□ 0.36
USP39-201ENST00000323701 SH3GL3Q99963 347 aa17.28■□□□□ 0.36
USP39-201ENST00000323701 CLCA2Q9UQC9 943 aa17.28■□□□□ 0.36
USP39-201ENST00000323701 SLC28A2O43868 658 aa17.27■□□□□ 0.36
USP39-201ENST00000323701 CHRM4P08173 479 aa17.27■□□□□ 0.36
USP39-201ENST00000323701 PORP16435 677 aaPredicted RBP17.27■□□□□ 0.36
USP39-201ENST00000323701 GPR3P46089 330 aa17.27■□□□□ 0.36
USP39-201ENST00000323701 PUM1Q14671 1186 aaKnown RBP eCLIP17.27■□□□□ 0.36
USP39-201ENST00000323701 ZIK1Q3SY52 487 aaPredicted RBP17.27■□□□□ 0.36
USP39-201ENST00000323701 PEAR1Q5VY43 1037 aaPredicted RBP17.27■□□□□ 0.36
USP39-201ENST00000323701 PIWIL3Q7Z3Z3 882 aaKnown RBP17.27■□□□□ 0.36
USP39-201ENST00000323701 CARM1Q86X55 608 aa17.27■□□□□ 0.36
USP39-201ENST00000323701 PEX11GQ96HA9 241 aa17.27■□□□□ 0.36
USP39-201ENST00000323701 FBXL20Q96IG2 436 aa17.27■□□□□ 0.36
USP39-201ENST00000323701 ZC3H10Q96K80 434 aaKnown RBP17.27■□□□□ 0.36
USP39-201ENST00000323701 ADI1Q9BV57 179 aa17.27■□□□□ 0.36
USP39-201ENST00000323701 SMOC1Q9H4F8 434 aa17.27■□□□□ 0.36
USP39-201ENST00000323701 IRAK4Q9NWZ3 460 aa17.27■□□□□ 0.36
USP39-201ENST00000323701 SUSD2Q9UGT4 822 aa17.27■□□□□ 0.36
USP39-201ENST00000323701 ATXN7L1Q9ULK2 861 aaPredicted RBP17.27■□□□□ 0.36
USP39-201ENST00000323701 SH3GLB1Q9Y371 365 aa17.27■□□□□ 0.36
USP39-201ENST00000323701 C5orf58C9J3I9 102 aa17.26■□□□□ 0.35
USP39-201ENST00000323701 J3KTA2 159 aa17.26■□□□□ 0.35
USP39-201ENST00000323701 AGRPO00253 132 aa17.26■□□□□ 0.35
USP39-201ENST00000323701 DUX1O43812 170 aa17.26■□□□□ 0.35
USP39-201ENST00000323701 E2F6O75461 281 aa17.26■□□□□ 0.35
USP39-201ENST00000323701 MFN2O95140 757 aa17.26■□□□□ 0.35
USP39-201ENST00000323701 GPR75O95800 540 aa17.26■□□□□ 0.35
USP39-201ENST00000323701 CT62P0C5K7 136 aa17.26■□□□□ 0.35
USP39-201ENST00000323701 FOLR1P15328 257 aa17.26■□□□□ 0.35
USP39-201ENST00000323701 CD247P20963 164 aa17.26■□□□□ 0.35
USP39-201ENST00000323701 PEX19P40855 299 aa17.26■□□□□ 0.35
USP39-201ENST00000323701 RAB38P57729 211 aa17.26■□□□□ 0.35
USP39-201ENST00000323701 PPP2R2BQ00005 443 aa17.26■□□□□ 0.35
USP39-201ENST00000323701 DAG1Q14118 895 aa17.26■□□□□ 0.35
USP39-201ENST00000323701 ZNF628Q5EBL2 1059 aa17.26■□□□□ 0.35
USP39-201ENST00000323701 SLC16A11Q8NCK7 471 aa17.26■□□□□ 0.35
USP39-201ENST00000323701 OR56A1Q8NGH5 318 aa17.26■□□□□ 0.35
USP39-201ENST00000323701 APOBEC4Q8WW27 367 aaKnown RBP17.26■□□□□ 0.35
USP39-201ENST00000323701 SMPD3Q9NY59 655 aaPredicted RBP17.26■□□□□ 0.35
USP39-201ENST00000323701 PADI2Q9Y2J8 665 aa17.26■□□□□ 0.35
USP39-201ENST00000323701 CPED1A4D0V7 1026 aa17.26■□□□□ 0.35
USP39-201ENST00000323701 HYAL3O43820 417 aaPredicted RBP17.26■□□□□ 0.35
USP39-201ENST00000323701 ALDH3A2P51648 485 aa17.26■□□□□ 0.35
USP39-201ENST00000323701 PRR5P85299 388 aa17.26■□□□□ 0.35
USP39-201ENST00000323701 MYBPC1Q00872 1141 aa17.26■□□□□ 0.35
USP39-201ENST00000323701 MGAT2Q10469 447 aa17.26■□□□□ 0.35
USP39-201ENST00000323701 MERTKQ12866 999 aa17.26■□□□□ 0.35
USP39-201ENST00000323701 FHL5Q5TD97 284 aa17.26■□□□□ 0.35
USP39-201ENST00000323701 ZNF574Q6ZN55 896 aaPredicted RBP17.26■□□□□ 0.35
USP39-201ENST00000323701 OR2L13Q8N349 312 aa17.26■□□□□ 0.35
USP39-201ENST00000323701 OR4C6Q8NH72 309 aa17.26■□□□□ 0.35
USP39-201ENST00000323701 MIPOL1Q8TD10 442 aa17.26■□□□□ 0.35
USP39-201ENST00000323701 POP5Q969H6 163 aaKnown RBP17.26■□□□□ 0.35
USP39-201ENST00000323701 OR7D2Q96RA2 312 aa17.26■□□□□ 0.35
USP39-201ENST00000323701 CD180Q99467 661 aa17.26■□□□□ 0.35
USP39-201ENST00000323701 OSBPL10Q9BXB5 764 aa17.26■□□□□ 0.35
USP39-201ENST00000323701 NPLQ9BXD5 320 aaPredicted RBP17.26■□□□□ 0.35
USP39-201ENST00000323701 QRSL1Q9H0R6 528 aaKnown RBP17.26■□□□□ 0.35
USP39-201ENST00000323701 CAPN10Q9HC96 672 aa17.26■□□□□ 0.35
USP39-201ENST00000323701 DDX18Q9NVP1 670 aaKnown RBP17.26■□□□□ 0.35
USP39-201ENST00000323701 MN1Q10571 1320 aaPredicted RBP17.26■□□□□ 0.35
USP39-201ENST00000323701 JRKO75564 520 aa17.25■□□□□ 0.35
USP39-201ENST00000323701 ZIC2O95409 532 aaPredicted RBP17.25■□□□□ 0.35
USP39-201ENST00000323701 NR2F1P10589 423 aa17.25■□□□□ 0.35
USP39-201ENST00000323701 KHKP50053 298 aa17.25■□□□□ 0.35
USP39-201ENST00000323701 ITGA1P56199 1179 aa17.25■□□□□ 0.35
USP39-201ENST00000323701 BTG2P78543 158 aa17.25■□□□□ 0.35
USP39-201ENST00000323701 TXNL4AP83876 142 aaKnown RBP17.25■□□□□ 0.35
USP39-201ENST00000323701 SLC36A3Q495N2 470 aa17.25■□□□□ 0.35
USP39-201ENST00000323701 PATL1Q86TB9 770 aaKnown RBP17.25■□□□□ 0.35
USP39-201ENST00000323701 PLXDC1Q8IUK5 500 aa17.25■□□□□ 0.35
USP39-201ENST00000323701 OR5K1Q8NHB7 308 aa17.25■□□□□ 0.35
USP39-201ENST00000323701 CYGBQ8WWM9 190 aa17.25■□□□□ 0.35
USP39-201ENST00000323701 ZG16BQ96DA0 208 aa17.25■□□□□ 0.35
USP39-201ENST00000323701 AMBRA1Q9C0C7 1298 aa17.25■□□□□ 0.35
USP39-201ENST00000323701 CHRNA10Q9GZZ6 450 aa17.25■□□□□ 0.35
USP39-201ENST00000323701 C3orf14Q9HBI5 128 aa17.25■□□□□ 0.35
USP39-201ENST00000323701 PRDM9Q9NQV7 894 aa17.25■□□□□ 0.35
USP39-201ENST00000323701 NTMQ9P121 344 aa17.25■□□□□ 0.35
USP39-201ENST00000323701 P2RX2Q9UBL9 471 aa17.25■□□□□ 0.35
USP39-201ENST00000323701 CLDN16Q9Y5I7 305 aa17.25■□□□□ 0.35
USP39-201ENST00000323701 MAU2Q9Y6X3 613 aa17.25■□□□□ 0.35
USP39-201ENST00000323701 FITM1A5D6W6 292 aa17.25■□□□□ 0.35
USP39-201ENST00000323701 TMEM150CB9EJG8 249 aa17.25■□□□□ 0.35
USP39-201ENST00000323701 SEMA7AO75326 666 aa17.25■□□□□ 0.35
USP39-201ENST00000323701 ATP1B1P05026 303 aa17.25■□□□□ 0.35
USP39-201ENST00000323701 GPLD1P80108 840 aa17.25■□□□□ 0.35
USP39-201ENST00000323701 HSD11B2P80365 405 aa17.25■□□□□ 0.35
USP39-201ENST00000323701 FAM53BQ14153 422 aa17.25■□□□□ 0.35
USP39-201ENST00000323701 IFI44LQ53G44 452 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms