RNA–Protein interactions for RNA: ENST00000321253.6

TUBA3D-201, Transcript of tubulin alpha 3d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3D, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-201ENST00000321253 TSPAN10Q9H1Z9 355 aaPredicted RBP13.55□□□□□ -0.24
TUBA3D-201ENST00000321253 TUBB1Q9H4B7 451 aa13.55□□□□□ -0.24
TUBA3D-201ENST00000321253 MYNNQ9NPC7 610 aa13.55□□□□□ -0.24
TUBA3D-201ENST00000321253 SLC35C2Q9NQQ7 365 aa13.55□□□□□ -0.24
TUBA3D-201ENST00000321253 MAT2BQ9NZL9 334 aa13.55□□□□□ -0.24
TUBA3D-201ENST00000321253 BCAP29Q9UHQ4 241 aa13.55□□□□□ -0.24
TUBA3D-201ENST00000321253 NPIPA1Q9UND3 350 aa13.55□□□□□ -0.24
TUBA3D-201ENST00000321253 CFL2Q9Y281 166 aa13.55□□□□□ -0.24
TUBA3D-201ENST00000321253 CCL27Q9Y4X3 112 aa13.55□□□□□ -0.24
TUBA3D-201ENST00000321253 ZGRF1Q86YA3 2104 aa13.55□□□□□ -0.24
TUBA3D-201ENST00000321253 HIVEP3Q5T1R4 2406 aa13.55□□□□□ -0.24
TUBA3D-201ENST00000321253 NPIPB8E9PQR5 432 aa13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 TFECO14948 347 aaPredicted RBP13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 BIRC5O15392 142 aa13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 ZNF354AO60765 605 aaPredicted RBP13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 HSPA4LO95757 839 aa13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 P04436 131 aa13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 PTGER1P34995 402 aa13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 NR0B1P51843 470 aaKnown RBP13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 KRTCAP3Q53RY4 240 aa13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 BEND6Q5SZJ8 279 aaPredicted RBP13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 FAM111BQ6SJ93 734 aa13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 CCDC116Q8IYX3 515 aa13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 ZNF615Q8N8J6 731 aa13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 OR2T11Q8NH01 316 aa13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 TP53INP1Q96A56 240 aa13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 SPACA9Q96E40 222 aaPredicted RBP13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 GPR137Q96N19 417 aa13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 BBS4Q96RK4 519 aa13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 SACM1LQ9NTJ5 587 aa13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 SLC5A6Q9Y289 635 aa13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 USP9XQ93008 2570 aaPredicted RBP13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 CROCCQ5TZA2 2017 aa13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 CAPN14A8MX76 684 aa13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 PIP5K1BO14986 540 aa13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 NADKO95544 446 aaPredicted RBP13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 SERPINE1P05121 402 aa13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 MPIP34949 423 aa13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 RFC3P40938 356 aa13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 NRG3P56975 720 aa13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 RPL38P63173 70 aaKnown RBP13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 DUSP2Q05923 314 aa13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 MGAT2Q10469 447 aa13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 EXOSC7Q15024 291 aaKnown RBP13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 KIAA0040Q15053 153 aa13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 LTB4RQ15722 352 aa13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 CHI3L2Q15782 390 aa13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 ZNF791Q3KP31 576 aaPredicted RBP13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 GALNTL6Q49A17 601 aa13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 FAM71E1Q6IPT2 247 aa13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 GK5Q6ZS86 529 aa13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 Q6ZSR9 355 aa13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 TICAM1Q8IUC6 712 aa13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 FAM9CQ8IZT9 166 aa13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 FAM13CQ8NE31 585 aa13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 C16orf52Q8NHV5 167 aa13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 ZNF675Q8TD23 568 aa13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 SSC4DQ8WTU2 575 aa13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 TMED5Q9Y3A6 229 aa13.54□□□□□ -0.24
TUBA3D-201ENST00000321253 DOPEY2Q9Y3R5 2298 aa13.53□□□□□ -0.24
TUBA3D-201ENST00000321253 FLNBO75369 2602 aaKnown RBP13.53□□□□□ -0.24
TUBA3D-201ENST00000321253 TMEM114B3SHH9 223 aa13.53□□□□□ -0.24
TUBA3D-201ENST00000321253 G3V3Y1 287 aa13.53□□□□□ -0.24
TUBA3D-201ENST00000321253 ACOT7O00154 380 aa13.53□□□□□ -0.24
TUBA3D-201ENST00000321253 LSM1O15116 133 aaKnown RBP13.53□□□□□ -0.24
TUBA3D-201ENST00000321253 BCAS2O75934 225 aaPredicted RBP13.53□□□□□ -0.24
TUBA3D-201ENST00000321253 FBXO45P0C2W1 286 aa13.53□□□□□ -0.24
TUBA3D-201ENST00000321253 PCSK2P16519 638 aa13.53□□□□□ -0.24
TUBA3D-201ENST00000321253 S1PR1P21453 382 aa13.53□□□□□ -0.24
TUBA3D-201ENST00000321253 CNR1P21554 472 aa13.53□□□□□ -0.24
TUBA3D-201ENST00000321253 NTSP30990 170 aa13.53□□□□□ -0.24
TUBA3D-201ENST00000321253 ARRB2P32121 409 aa13.53□□□□□ -0.24
TUBA3D-201ENST00000321253 TMED10P49755 219 aaKnown RBP13.53□□□□□ -0.24
TUBA3D-201ENST00000321253 MRPS35P82673 323 aaKnown RBP13.53□□□□□ -0.24
TUBA3D-201ENST00000321253 PLGLB1Q02325 96 aa13.53□□□□□ -0.24
TUBA3D-201ENST00000321253 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.53□□□□□ -0.24
TUBA3D-201ENST00000321253 UGT3A2Q3SY77 523 aa13.53□□□□□ -0.24
TUBA3D-201ENST00000321253 C4orf17Q53FE4 359 aa13.53□□□□□ -0.24
TUBA3D-201ENST00000321253 TRMT12Q53H54 448 aaKnown RBP13.53□□□□□ -0.24
TUBA3D-201ENST00000321253 ZNF628Q5EBL2 1059 aa13.53□□□□□ -0.24
TUBA3D-201ENST00000321253 SLC22A10Q63ZE4 541 aa13.53□□□□□ -0.24
TUBA3D-201ENST00000321253 FAM47EQ6ZV65 393 aa13.53□□□□□ -0.24
TUBA3D-201ENST00000321253 ZNF441Q8N8Z8 693 aa13.53□□□□□ -0.24
TUBA3D-201ENST00000321253 ZFP62Q8NB50 900 aaPredicted RBP13.53□□□□□ -0.24
TUBA3D-201ENST00000321253 C17orf47Q8NEP4 570 aa13.53□□□□□ -0.24
TUBA3D-201ENST00000321253 OR52R1Q8NGF1 315 aa13.53□□□□□ -0.24
TUBA3D-201ENST00000321253 OR9A2Q8NGT5 310 aa13.53□□□□□ -0.24
TUBA3D-201ENST00000321253 OR6Y1Q8NGX8 325 aa13.53□□□□□ -0.24
TUBA3D-201ENST00000321253 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.53□□□□□ -0.24
TUBA3D-201ENST00000321253 CTHRC1Q96CG8 243 aa13.53□□□□□ -0.24
TUBA3D-201ENST00000321253 ERP27Q96DN0 273 aa13.53□□□□□ -0.24
TUBA3D-201ENST00000321253 MAGED4Q96JG8 741 aa13.53□□□□□ -0.24
TUBA3D-201ENST00000321253 CCT7Q99832 543 aa13.53□□□□□ -0.24
TUBA3D-201ENST00000321253 PAIP2Q9BPZ3 127 aaKnown RBP13.53□□□□□ -0.24
TUBA3D-201ENST00000321253 FAM173AQ9BQD7 235 aa13.53□□□□□ -0.24
TUBA3D-201ENST00000321253 DEPPQ9NTK1 212 aa13.53□□□□□ -0.24
TUBA3D-201ENST00000321253 PRODH2Q9UF12 536 aa13.53□□□□□ -0.24
TUBA3D-201ENST00000321253 ZNF639Q9UID6 485 aa13.53□□□□□ -0.24
TUBA3D-201ENST00000321253 ZDHHC2Q9UIJ5 367 aa13.53□□□□□ -0.24
TUBA3D-201ENST00000321253 ERRFI1Q9UJM3 462 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms