RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 SLC15A1P46059 708 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 ETV1P50549 477 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 SRSF11Q05519 484 aaKnown RBP12.36□□□□□ -0.43
CPNE1-201ENST00000317677 RIPPLY1Q0D2K3 151 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 MFSD13AQ14CX5 517 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 MPEG1Q2M385 716 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 TOR2AQ5JU69 321 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 SLC9B2Q86UD5 537 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 STK32CQ86UX6 486 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 MMP21Q8N119 569 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 SVOPLQ8N434 492 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 OR13H1Q8NG92 308 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 RPL3LQ92901 407 aaKnown RBP12.36□□□□□ -0.43
CPNE1-201ENST00000317677 COQ8BQ96D53 544 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 GIMAP5Q96F15 307 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 CCDC115Q96NT0 180 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 TBCDQ9BTW9 1192 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 THUMPD3Q9BV44 507 aaKnown RBP12.36□□□□□ -0.43
CPNE1-201ENST00000317677 ROGDIQ9GZN7 287 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 MVB12BQ9H7P6 319 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 SLC6A20Q9NP91 592 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 CCNB1IP1Q9NPC3 277 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 LHX9Q9NQ69 397 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 ZNF624Q9P2J8 865 aaPredicted RBP12.36□□□□□ -0.43
CPNE1-201ENST00000317677 SNX7Q9UNH6 387 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 ARHGEF17Q96PE2 2063 aaPredicted RBP12.36□□□□□ -0.43
CPNE1-201ENST00000317677 LOC100130705A0A1B0GUX0 176 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 GNG14A0A1W2PPG7 69 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 MEIOCA2RUB1 952 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 RTCAO00442 366 aaKnown RBP12.36□□□□□ -0.43
CPNE1-201ENST00000317677 PLPP1O14494 284 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 RFXANKO14593 260 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 PDGFBP01127 241 aaPredicted RBP12.36□□□□□ -0.43
CPNE1-201ENST00000317677 HOXB3P14651 431 aaPredicted RBP12.36□□□□□ -0.43
CPNE1-201ENST00000317677 PCSK2P16519 638 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 MLLT3P42568 568 aaPredicted RBP12.36□□□□□ -0.43
CPNE1-201ENST00000317677 CBX5P45973 191 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 ASMTP46597 345 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 CCR8P51685 355 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 PRDX1Q06830 199 aaKnown RBP12.36□□□□□ -0.43
CPNE1-201ENST00000317677 SNTA1Q13424 505 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 DUOXA1Q1HG43 343 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 RFX4Q33E94 735 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 ABI3BPQ7Z7G0 1075 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 KRT78Q8N1N4 520 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 FAM86B1Q8N7N1 296 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 OR2T12Q8NG77 320 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 C16orf78Q8WTQ4 265 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 SLC38A4Q969I6 547 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 UBE2E3Q969T4 207 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 ZNF578Q96N58 590 aaPredicted RBP12.36□□□□□ -0.43
CPNE1-201ENST00000317677 RBM4BQ9BQ04 359 aaKnown RBP12.36□□□□□ -0.43
CPNE1-201ENST00000317677 ORAI3Q9BRQ5 295 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 DUSP26Q9BV47 211 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 RBM4Q9BWF3 364 aaKnown RBP12.36□□□□□ -0.43
CPNE1-201ENST00000317677 CDADC1Q9BWV3 514 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 PCBD2Q9H0N5 130 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 TCEAL2Q9H3H9 227 aaPredicted RBP12.36□□□□□ -0.43
CPNE1-201ENST00000317677 FAM120CQ9NX05 1096 aaKnown RBP12.36□□□□□ -0.43
CPNE1-201ENST00000317677 MAT2BQ9NZL9 334 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 ERVK-18Q9QC07 812 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 ATP6V1HQ9UI12 483 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 MAGEL2Q9UJ55 1249 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 KLHL21Q9UJP4 597 aa12.36□□□□□ -0.43
CPNE1-201ENST00000317677 PIEZO1Q92508 2521 aa12.35□□□□□ -0.43
CPNE1-201ENST00000317677 DNAH14Q0VDD8 3507 aa12.35□□□□□ -0.43
CPNE1-201ENST00000317677 FAM25EA8MYX2 175 aa12.35□□□□□ -0.43
CPNE1-201ENST00000317677 ATP6V1G2-DDX39BF2Z307 99 aa12.35□□□□□ -0.43
CPNE1-201ENST00000317677 G3V2T6 193 aa12.35□□□□□ -0.43
CPNE1-201ENST00000317677 STK25O00506 426 aa12.35□□□□□ -0.43
CPNE1-201ENST00000317677 KLK1P06870 262 aa12.35□□□□□ -0.43
CPNE1-201ENST00000317677 RAP2AP10114 183 aa12.35□□□□□ -0.43
CPNE1-201ENST00000317677 DBTP11182 482 aaKnown RBP12.35□□□□□ -0.43
CPNE1-201ENST00000317677 GZMKP49863 264 aa12.35□□□□□ -0.43
CPNE1-201ENST00000317677 ZNF763Q0D2J5 394 aa12.35□□□□□ -0.43
CPNE1-201ENST00000317677 PDE7AQ13946 482 aa12.35□□□□□ -0.43
CPNE1-201ENST00000317677 NKG7Q16617 165 aa12.35□□□□□ -0.43
CPNE1-201ENST00000317677 SHEQ5VZ18 495 aa12.35□□□□□ -0.43
CPNE1-201ENST00000317677 FAM71E1Q6IPT2 247 aa12.35□□□□□ -0.43
CPNE1-201ENST00000317677 Q6ZSR6 202 aa12.35□□□□□ -0.43
CPNE1-201ENST00000317677 SYT13Q7L8C5 426 aa12.35□□□□□ -0.43
CPNE1-201ENST00000317677 CCDC190Q86UF4 302 aa12.35□□□□□ -0.43
CPNE1-201ENST00000317677 ADGRF3Q8IZF5 1079 aa12.35□□□□□ -0.43
CPNE1-201ENST00000317677 PGBD3Q8N328 593 aa12.35□□□□□ -0.43
CPNE1-201ENST00000317677 FAM160A2Q8N612 972 aaPredicted RBP12.35□□□□□ -0.43
CPNE1-201ENST00000317677 LINC00469Q8N7U9 141 aa12.35□□□□□ -0.43
CPNE1-201ENST00000317677 DNAJB8Q8NHS0 232 aa12.35□□□□□ -0.43
CPNE1-201ENST00000317677 PMEPA1Q969W9 287 aa12.35□□□□□ -0.43
CPNE1-201ENST00000317677 OR2A14Q96R47 310 aa12.35□□□□□ -0.43
CPNE1-201ENST00000317677 F2RL3Q96RI0 385 aa12.35□□□□□ -0.43
CPNE1-201ENST00000317677 SDHCQ99643 169 aaPredicted RBP12.35□□□□□ -0.43
CPNE1-201ENST00000317677 AIF1LQ9BQI0 150 aa12.35□□□□□ -0.43
CPNE1-201ENST00000317677 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.35□□□□□ -0.431e-8■□□□□ 8.2
CPNE1-201ENST00000317677 MIR1-1HGQ9H1L0 117 aa12.35□□□□□ -0.43
CPNE1-201ENST00000317677 KIR3DX1Q9H7L2 352 aa12.35□□□□□ -0.43
CPNE1-201ENST00000317677 NT5DC2Q9H857 520 aa12.35□□□□□ -0.43
CPNE1-201ENST00000317677 LMAN1LQ9HAT1 526 aa12.35□□□□□ -0.43
CPNE1-201ENST00000317677 MYNNQ9NPC7 610 aa12.35□□□□□ -0.43
CPNE1-201ENST00000317677 ACOT13Q9NPJ3 140 aa12.35□□□□□ -0.43
CPNE1-201ENST00000317677 KLF15Q9UIH9 416 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms