RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 TTC36A6NLP5 189 aa16.65■□□□□ 0.26
SSSCA1-201ENST00000309328 SOX30O94993 753 aa16.65■□□□□ 0.26
SSSCA1-201ENST00000309328 PGRP06401 933 aa16.65■□□□□ 0.26
SSSCA1-201ENST00000309328 ITGAMP11215 1152 aa16.65■□□□□ 0.26
SSSCA1-201ENST00000309328 ADSLP30566 484 aaPredicted RBP16.65■□□□□ 0.26
SSSCA1-201ENST00000309328 SLC37A1P57057 533 aa16.65■□□□□ 0.26
SSSCA1-201ENST00000309328 UFM1P61960 85 aa16.65■□□□□ 0.26
SSSCA1-201ENST00000309328 DCAF7P61962 342 aa16.65■□□□□ 0.26
SSSCA1-201ENST00000309328 PRR5P85299 388 aa16.65■□□□□ 0.26
SSSCA1-201ENST00000309328 MGAT2Q10469 447 aa16.65■□□□□ 0.26
SSSCA1-201ENST00000309328 ZNF750Q32MQ0 723 aa16.65■□□□□ 0.26
SSSCA1-201ENST00000309328 PGS1Q32NB8 556 aa16.65■□□□□ 0.26
SSSCA1-201ENST00000309328 FAM174BQ3ZCQ3 159 aa16.65■□□□□ 0.26
SSSCA1-201ENST00000309328 ZNF385BQ569K4 471 aa16.65■□□□□ 0.26
SSSCA1-201ENST00000309328 ABHD17BQ5VST6 288 aa16.65■□□□□ 0.26
SSSCA1-201ENST00000309328 ANKRD26P1Q6NSI1 321 aa16.65■□□□□ 0.26
SSSCA1-201ENST00000309328 SPATA21Q7Z572 469 aa16.65■□□□□ 0.26
SSSCA1-201ENST00000309328 FDCSPQ8NFU4 85 aa16.65■□□□□ 0.26
SSSCA1-201ENST00000309328 CRELD1Q96HD1 420 aa16.65■□□□□ 0.26
SSSCA1-201ENST00000309328 UBL7Q96S82 380 aaPredicted RBP16.65■□□□□ 0.26
SSSCA1-201ENST00000309328 RNF32Q9H0A6 362 aa16.65■□□□□ 0.26
SSSCA1-201ENST00000309328 OR10A5Q9H207 317 aa16.65■□□□□ 0.26
SSSCA1-201ENST00000309328 C3orf14Q9HBI5 128 aa16.65■□□□□ 0.26
SSSCA1-201ENST00000309328 DDX18Q9NVP1 670 aaKnown RBP16.65■□□□□ 0.26
SSSCA1-201ENST00000309328 TAS2R9Q9NYW1 312 aa16.65■□□□□ 0.26
SSSCA1-201ENST00000309328 MYOCOSA0A1B0GUC4 107 aa16.64■□□□□ 0.25
SSSCA1-201ENST00000309328 A6NL46 340 aa16.64■□□□□ 0.25
SSSCA1-201ENST00000309328 DNAJB5O75953 348 aa16.64■□□□□ 0.25
SSSCA1-201ENST00000309328 NCF2P19878 526 aaPredicted RBP16.64■□□□□ 0.25
SSSCA1-201ENST00000309328 SOX11P35716 441 aa16.64■□□□□ 0.25
SSSCA1-201ENST00000309328 RNF4P78317 190 aa16.64■□□□□ 0.25
SSSCA1-201ENST00000309328 MFAP5Q13361 173 aa16.64■□□□□ 0.25
SSSCA1-201ENST00000309328 MPEG1Q2M385 716 aa16.64■□□□□ 0.25
SSSCA1-201ENST00000309328 HLA-DQA1Q5Y7H0 255 aa16.64■□□□□ 0.25
SSSCA1-201ENST00000309328 CGB2Q6NT52 195 aa16.64■□□□□ 0.25
SSSCA1-201ENST00000309328 TMEM64Q6YI46 380 aa16.64■□□□□ 0.25
SSSCA1-201ENST00000309328 RPS19BP1Q86WX3 136 aaKnown RBP16.64■□□□□ 0.25
SSSCA1-201ENST00000309328 DND1Q8IYX4 353 aaKnown RBP16.64■□□□□ 0.25
SSSCA1-201ENST00000309328 OR2L13Q8N349 312 aa16.64■□□□□ 0.25
SSSCA1-201ENST00000309328 C9orf43Q8TAL5 461 aaPredicted RBP16.64■□□□□ 0.25
SSSCA1-201ENST00000309328 PSMF1Q92530 271 aa16.64■□□□□ 0.25
SSSCA1-201ENST00000309328 TP53INP1Q96A56 240 aa16.64■□□□□ 0.25
SSSCA1-201ENST00000309328 CIDECQ96AQ7 238 aaPredicted RBP16.64■□□□□ 0.25
SSSCA1-201ENST00000309328 ELP4Q96EB1 424 aa16.64■□□□□ 0.25
SSSCA1-201ENST00000309328 THOC1Q96FV9 657 aaKnown RBP16.64■□□□□ 0.25
SSSCA1-201ENST00000309328 ZNF552Q9H707 407 aaPredicted RBP16.64■□□□□ 0.25
SSSCA1-201ENST00000309328 RMND5AQ9H871 391 aa16.64■□□□□ 0.25
SSSCA1-201ENST00000309328 NTMQ9P121 344 aa16.64■□□□□ 0.25
SSSCA1-201ENST00000309328 BTNL2Q9UIR0 455 aa16.64■□□□□ 0.25
SSSCA1-201ENST00000309328 C19orf53Q9UNZ5 99 aaPredicted RBP16.64■□□□□ 0.25
SSSCA1-201ENST00000309328 A0A1W2PS29 197 aa16.63■□□□□ 0.25
SSSCA1-201ENST00000309328 SLC22A2O15244 555 aa16.63■□□□□ 0.25
SSSCA1-201ENST00000309328 CFLARO15519 480 aa16.63■□□□□ 0.25
SSSCA1-201ENST00000309328 CCDC22O60826 627 aa16.63■□□□□ 0.25
SSSCA1-201ENST00000309328 S1PR1P21453 382 aa16.63■□□□□ 0.25
SSSCA1-201ENST00000309328 GPX3P22352 226 aa16.63■□□□□ 0.25
SSSCA1-201ENST00000309328 POLR2JP52435 117 aaKnown RBP16.63■□□□□ 0.25
SSSCA1-201ENST00000309328 GYS2P54840 703 aa16.63■□□□□ 0.25
SSSCA1-201ENST00000309328 KCNK10P57789 538 aa16.63■□□□□ 0.25
SSSCA1-201ENST00000309328 DUSP2Q05923 314 aa16.63■□□□□ 0.25
SSSCA1-201ENST00000309328 HSPB3Q12988 150 aa16.63■□□□□ 0.25
SSSCA1-201ENST00000309328 RCAN2Q14206 197 aa16.63■□□□□ 0.25
SSSCA1-201ENST00000309328 LINC00303Q3SY05 128 aa16.63■□□□□ 0.25
SSSCA1-201ENST00000309328 SPANXN4Q5MJ08 99 aa16.63■□□□□ 0.25
SSSCA1-201ENST00000309328 ACER2Q5QJU3 275 aa16.63■□□□□ 0.25
SSSCA1-201ENST00000309328 FAM180BQ6P0A1 224 aa16.63■□□□□ 0.25
SSSCA1-201ENST00000309328 IGFL2Q6UWQ7 119 aa16.63■□□□□ 0.25
SSSCA1-201ENST00000309328 IGFL3Q6UXB1 125 aa16.63■□□□□ 0.25
SSSCA1-201ENST00000309328 DGAT2L6Q6ZPD8 337 aa16.63■□□□□ 0.25
SSSCA1-201ENST00000309328 MTERF4Q7Z6M4 381 aaKnown RBP16.63■□□□□ 0.25
SSSCA1-201ENST00000309328 GPALPP1Q8IXQ4 340 aa16.63■□□□□ 0.25
SSSCA1-201ENST00000309328 SLC15A4Q8N697 577 aa16.63■□□□□ 0.25
SSSCA1-201ENST00000309328 HORMAD2Q8N7B1 307 aa16.63■□□□□ 0.25
SSSCA1-201ENST00000309328 TRIML2Q8N7C3 387 aa16.63■□□□□ 0.25
SSSCA1-201ENST00000309328 ZNF615Q8N8J6 731 aa16.63■□□□□ 0.25
SSSCA1-201ENST00000309328 ADCY4Q8NFM4 1077 aa16.63■□□□□ 0.25
SSSCA1-201ENST00000309328 SFXN5Q8TD22 340 aa16.63■□□□□ 0.25
SSSCA1-201ENST00000309328 TSPEARQ8WU66 669 aa16.63■□□□□ 0.25
SSSCA1-201ENST00000309328 NUDT9Q9BW91 350 aa16.63■□□□□ 0.25
SSSCA1-201ENST00000309328 EPN3Q9H201 632 aa16.63■□□□□ 0.25
SSSCA1-201ENST00000309328 SLAMF7Q9NQ25 335 aa16.63■□□□□ 0.25
SSSCA1-201ENST00000309328 MYOTQ9UBF9 498 aa16.63■□□□□ 0.25
SSSCA1-201ENST00000309328 BCAP29Q9UHQ4 241 aa16.63■□□□□ 0.25
SSSCA1-201ENST00000309328 ADAM21Q9UKJ8 722 aa16.63■□□□□ 0.25
SSSCA1-201ENST00000309328 LHX6Q9UPM6 363 aa16.63■□□□□ 0.25
SSSCA1-201ENST00000309328 YARS2Q9Y2Z4 477 aaKnown RBP16.63■□□□□ 0.25
SSSCA1-201ENST00000309328 COPG1Q9Y678 874 aaKnown RBP16.63■□□□□ 0.25
SSSCA1-201ENST00000309328 CCDC88CQ9P219 2028 aa16.63■□□□□ 0.25
SSSCA1-201ENST00000309328 ITPR1Q14643 2758 aa16.63■□□□□ 0.25
SSSCA1-201ENST00000309328 C2orf92A0A1B0GVN3 265 aa16.62■□□□□ 0.25
SSSCA1-201ENST00000309328 A8MUI8 341 aa16.62■□□□□ 0.25
SSSCA1-201ENST00000309328 DPM1O60762 260 aa16.62■□□□□ 0.25
SSSCA1-201ENST00000309328 SHOX2O60902 331 aaPredicted RBP16.62■□□□□ 0.25
SSSCA1-201ENST00000309328 CELA2AP08217 269 aa16.62■□□□□ 0.25
SSSCA1-201ENST00000309328 CT62P0C5K7 136 aa16.62■□□□□ 0.25
SSSCA1-201ENST00000309328 CASRP41180 1078 aa16.62■□□□□ 0.25
SSSCA1-201ENST00000309328 MC3RP41968 323 aa16.62■□□□□ 0.25
SSSCA1-201ENST00000309328 SEC24CP53992 1094 aa16.62■□□□□ 0.25
SSSCA1-201ENST00000309328 NME5P56597 212 aa16.62■□□□□ 0.25
SSSCA1-201ENST00000309328 NRG3P56975 720 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms