RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 DLGAP4Q9Y2H0 992 aa24.38■■□□□ 1.49
CDKN2A-201ENST00000304494 TIA1P31483 386 aaKnown RBP eCLIP24.37■■□□□ 1.49
CDKN2A-201ENST00000304494 DCTP40126 519 aa24.37■■□□□ 1.49
CDKN2A-201ENST00000304494 TMED10P49755 219 aaKnown RBP24.37■■□□□ 1.49
CDKN2A-201ENST00000304494 NR0B1P51843 470 aaKnown RBP24.37■■□□□ 1.49
CDKN2A-201ENST00000304494 FOXA1P55317 472 aa24.37■■□□□ 1.49
CDKN2A-201ENST00000304494 NRG3P56975 720 aa24.37■■□□□ 1.49
CDKN2A-201ENST00000304494 RAE1P78406 368 aaKnown RBP24.37■■□□□ 1.49
CDKN2A-201ENST00000304494 ART3Q13508 389 aa24.37■■□□□ 1.49
CDKN2A-201ENST00000304494 IMPG1Q17R60 797 aa24.37■■□□□ 1.49
CDKN2A-201ENST00000304494 HYAL4Q2M3T9 481 aa24.37■■□□□ 1.49
CDKN2A-201ENST00000304494 PRICKLE4Q2TBC4 344 aa24.37■■□□□ 1.49
CDKN2A-201ENST00000304494 SPDYAQ5MJ70 313 aa24.37■■□□□ 1.49
CDKN2A-201ENST00000304494 XKRXQ6PP77 449 aa24.37■■□□□ 1.49
CDKN2A-201ENST00000304494 SAMD14Q8IZD0 417 aaPredicted RBP24.37■■□□□ 1.49
CDKN2A-201ENST00000304494 LRRC25Q8N386 305 aaPredicted RBP24.37■■□□□ 1.49
CDKN2A-201ENST00000304494 FBXW8Q8N3Y1 598 aa24.37■■□□□ 1.49
CDKN2A-201ENST00000304494 FAM109AQ8N4B1 249 aa24.37■■□□□ 1.49
CDKN2A-201ENST00000304494 FAM57AQ8TBR7 257 aa24.37■■□□□ 1.49
CDKN2A-201ENST00000304494 DEFB127Q9H1M4 99 aa24.37■■□□□ 1.49
CDKN2A-201ENST00000304494 C12orf65Q9H3J6 166 aaKnown RBP24.37■■□□□ 1.49
CDKN2A-201ENST00000304494 SIRT5Q9NXA8 310 aa24.37■■□□□ 1.49
CDKN2A-201ENST00000304494 ZNF500O60304 480 aaPredicted RBP24.36■■□□□ 1.49
CDKN2A-201ENST00000304494 PDE9AO76083 593 aa24.36■■□□□ 1.49
CDKN2A-201ENST00000304494 IL3P08700 152 aa24.36■■□□□ 1.49
CDKN2A-201ENST00000304494 AGAP20933 346 aa24.36■■□□□ 1.49
CDKN2A-201ENST00000304494 DNASE1L1P49184 302 aa24.36■■□□□ 1.49
CDKN2A-201ENST00000304494 KCNJ2P63252 427 aa24.36■■□□□ 1.49
CDKN2A-201ENST00000304494 BTKQ06187 659 aa24.36■■□□□ 1.49
CDKN2A-201ENST00000304494 NTRK2Q16620 822 aa24.36■■□□□ 1.49
CDKN2A-201ENST00000304494 SCIMPQ6UWF3 145 aa24.36■■□□□ 1.49
CDKN2A-201ENST00000304494 SLC34A3Q8N130 599 aa24.36■■□□□ 1.49
CDKN2A-201ENST00000304494 AENQ8WTP8 325 aaKnown RBP24.36■■□□□ 1.49
CDKN2A-201ENST00000304494 C11orf24Q96F05 449 aaPredicted RBP24.36■■□□□ 1.49
CDKN2A-201ENST00000304494 APOPT1Q96IL0 206 aa24.36■■□□□ 1.49
CDKN2A-201ENST00000304494 ROPN1BQ9BZX4 212 aaPredicted RBP24.36■■□□□ 1.49
CDKN2A-201ENST00000304494 ROPN1Q9HAT0 212 aaPredicted RBP24.36■■□□□ 1.49
CDKN2A-201ENST00000304494 MAT2BQ9NZL9 334 aa24.36■■□□□ 1.49
CDKN2A-201ENST00000304494 BOKQ9UMX3 212 aaPredicted RBP24.36■■□□□ 1.49
CDKN2A-201ENST00000304494 KLF2Q9Y5W3 355 aaPredicted RBP24.36■■□□□ 1.49
CDKN2A-201ENST00000304494 CHCHD2Q9Y6H1 151 aaPredicted RBP24.36■■□□□ 1.49
CDKN2A-201ENST00000304494 DIDO1Q9BTC0 2240 aaKnown RBP24.36■■□□□ 1.49
CDKN2A-201ENST00000304494 E9PLN8 166 aa24.35■■□□□ 1.49
CDKN2A-201ENST00000304494 TP53I11O14683 189 aa24.35■■□□□ 1.49
CDKN2A-201ENST00000304494 ZNHIT1O43257 154 aa24.35■■□□□ 1.49
CDKN2A-201ENST00000304494 TPOP07202 933 aa24.35■■□□□ 1.49
CDKN2A-201ENST00000304494 S1PR1P21453 382 aa24.35■■□□□ 1.49
CDKN2A-201ENST00000304494 PIGAP37287 484 aa24.35■■□□□ 1.49
CDKN2A-201ENST00000304494 FOXO1Q12778 655 aa24.35■■□□□ 1.49
CDKN2A-201ENST00000304494 TRIM46Q7Z4K8 759 aa24.35■■□□□ 1.49
CDKN2A-201ENST00000304494 OR10G3Q8NGC4 313 aa24.35■■□□□ 1.49
CDKN2A-201ENST00000304494 C16orf78Q8WTQ4 265 aa24.35■■□□□ 1.49
CDKN2A-201ENST00000304494 PHF10Q8WUB8 498 aaKnown RBP24.35■■□□□ 1.49
CDKN2A-201ENST00000304494 CAVIN3Q969G5 261 aa24.35■■□□□ 1.49
CDKN2A-201ENST00000304494 ADIPOR1Q96A54 375 aa24.35■■□□□ 1.49
CDKN2A-201ENST00000304494 CNRIP1Q96F85 164 aaPredicted RBP24.35■■□□□ 1.49
CDKN2A-201ENST00000304494 ZNF681Q96N22 645 aa24.35■■□□□ 1.49
CDKN2A-201ENST00000304494 PHF12Q96QT6 1004 aa24.35■■□□□ 1.49
CDKN2A-201ENST00000304494 VKORC1Q9BQB6 163 aa24.35■■□□□ 1.49
CDKN2A-201ENST00000304494 SHCBP1LQ9BZQ2 653 aa24.35■■□□□ 1.49
CDKN2A-201ENST00000304494 RRAGDQ9NQL2 400 aaPredicted RBP24.35■■□□□ 1.49
CDKN2A-201ENST00000304494 PFDN4Q9NQP4 134 aa24.35■■□□□ 1.49
CDKN2A-201ENST00000304494 TUBA8Q9NY65 449 aaPredicted RBP24.35■■□□□ 1.49
CDKN2A-201ENST00000304494 HEY2Q9UBP5 337 aa24.35■■□□□ 1.49
CDKN2A-201ENST00000304494 BCAP29Q9UHQ4 241 aa24.35■■□□□ 1.49
CDKN2A-201ENST00000304494 LGALS13Q9UHV8 139 aa24.35■■□□□ 1.49
CDKN2A-201ENST00000304494 PLLPQ9Y342 182 aa24.35■■□□□ 1.49
CDKN2A-201ENST00000304494 NPFFR2Q9Y5X5 522 aa24.35■■□□□ 1.49
CDKN2A-201ENST00000304494 SEC23IPQ9Y6Y8 1000 aaKnown RBP24.35■■□□□ 1.49
CDKN2A-201ENST00000304494 PRSS44E7EML9 344 aa24.34■■□□□ 1.49
CDKN2A-201ENST00000304494 ANXA4P09525 319 aaPredicted RBP24.34■■□□□ 1.49
CDKN2A-201ENST00000304494 UROSP10746 265 aa24.34■■□□□ 1.49
CDKN2A-201ENST00000304494 ADORA2A-AS1P86434 159 aa24.34■■□□□ 1.49
CDKN2A-201ENST00000304494 MGAT2Q10469 447 aa24.34■■□□□ 1.49
CDKN2A-201ENST00000304494 RPS6KA2Q15349 733 aa24.34■■□□□ 1.49
CDKN2A-201ENST00000304494 TBCELQ5QJ74 424 aa24.34■■□□□ 1.49
CDKN2A-201ENST00000304494 PRAMEF20Q5VT98 475 aa24.34■■□□□ 1.49
CDKN2A-201ENST00000304494 ZNF787Q6DD87 383 aa24.34■■□□□ 1.49
CDKN2A-201ENST00000304494 TRABD2AQ86V40 505 aa24.34■■□□□ 1.49
CDKN2A-201ENST00000304494 CD163Q86VB7 1156 aa24.34■■□□□ 1.49
CDKN2A-201ENST00000304494 C10orf107Q8IVU9 208 aa24.34■■□□□ 1.49
CDKN2A-201ENST00000304494 TMEM251Q8N6I4 163 aa24.34■■□□□ 1.49
CDKN2A-201ENST00000304494 EBPLQ9BY08 206 aa24.34■■□□□ 1.49
CDKN2A-201ENST00000304494 GIMAP4Q9NUV9 329 aa24.34■■□□□ 1.49
CDKN2A-201ENST00000304494 EHD3Q9NZN3 535 aa24.34■■□□□ 1.49
CDKN2A-201ENST00000304494 ZNF639Q9UID6 485 aa24.34■■□□□ 1.49
CDKN2A-201ENST00000304494 MAST4O15021 2626 aa24.33■■□□□ 1.49
CDKN2A-201ENST00000304494 GPX3P22352 226 aa24.33■■□□□ 1.49
CDKN2A-201ENST00000304494 MAGEA5P43359 124 aa24.33■■□□□ 1.49
CDKN2A-201ENST00000304494 RPP38P78345 283 aaKnown RBP24.33■■□□□ 1.49
CDKN2A-201ENST00000304494 ZNF763Q0D2J5 394 aa24.33■■□□□ 1.49
CDKN2A-201ENST00000304494 FAM111BQ6SJ93 734 aa24.33■■□□□ 1.49
CDKN2A-201ENST00000304494 HOMEZQ8IX15 550 aa24.33■■□□□ 1.49
CDKN2A-201ENST00000304494 BANPQ8N9N5 519 aa24.33■■□□□ 1.49
CDKN2A-201ENST00000304494 ADCY4Q8NFM4 1077 aa24.33■■□□□ 1.49
CDKN2A-201ENST00000304494 OR5M3Q8NGP4 307 aa24.33■■□□□ 1.49
CDKN2A-201ENST00000304494 FAM76AQ8TAV0 307 aa24.33■■□□□ 1.49
CDKN2A-201ENST00000304494 CTHRC1Q96CG8 243 aa24.33■■□□□ 1.49
CDKN2A-201ENST00000304494 SECISBP2Q96T21 854 aaKnown RBP24.33■■□□□ 1.49
CDKN2A-201ENST00000304494 TRMOQ9BU70 441 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms