RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 SNAP47Q5SQN1 464 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 FCRLBQ6BAA4 426 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 SDE2Q6IQ49 451 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 TRAM1L1Q8N609 369 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 HORMAD2Q8N7B1 307 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 OR51A7Q8NH64 312 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 LCN9Q8WX39 176 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 RGMAQ96B86 450 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 IFT27Q9BW83 186 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 MND1Q9BWT6 205 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 CHIAQ9BZP6 476 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 BTNL2Q9UIR0 455 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 CABIN1Q9Y6J0 2220 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 IGLON5A6NGN9 336 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 OR10H2O60403 315 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 DNAJB5O75953 348 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 ZDHHC11BP0C7U3 371 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 GPX2P18283 190 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 RHCEP18577 417 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 PTOV1Q86YD1 416 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 HDDC3Q8N4P3 179 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 FAM98AQ8NCA5 519 aaKnown RBP13.34□□□□□ -0.27
SDC2-201ENST00000302190 OR51L1Q8NGJ5 315 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 PIGXQ8TBF5 258 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 TADA1Q96BN2 335 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 SECISBP2Q96T21 854 aaKnown RBP13.34□□□□□ -0.27
SDC2-201ENST00000302190 ELAC1Q9H777 363 aaKnown RBP13.34□□□□□ -0.27
SDC2-201ENST00000302190 TM7SF3Q9NS93 570 aa13.34□□□□□ -0.27
SDC2-201ENST00000302190 A0A1W2PQ09 198 aa13.33□□□□□ -0.27
SDC2-201ENST00000302190 GPR37L1O60883 481 aa13.33□□□□□ -0.27
SDC2-201ENST00000302190 TIMP2P16035 220 aa13.33□□□□□ -0.27
SDC2-201ENST00000302190 PRKCAP17252 672 aa13.33□□□□□ -0.27
SDC2-201ENST00000302190 NRIP1P48552 1158 aa13.33□□□□□ -0.27
SDC2-201ENST00000302190 MRPL58Q14197 206 aaKnown RBP13.33□□□□□ -0.27
SDC2-201ENST00000302190 NNATQ16517 81 aa13.33□□□□□ -0.27
SDC2-201ENST00000302190 ZNF750Q32MQ0 723 aa13.33□□□□□ -0.27
SDC2-201ENST00000302190 C9orf50Q5SZB4 431 aa13.33□□□□□ -0.27
SDC2-201ENST00000302190 LIPIQ6XZB0 460 aa13.33□□□□□ -0.27
SDC2-201ENST00000302190 CCDC28AQ8IWP9 274 aa13.33□□□□□ -0.27
SDC2-201ENST00000302190 CBARPQ8N350 705 aaPredicted RBP13.33□□□□□ -0.27
SDC2-201ENST00000302190 SMPDL3AQ92484 453 aa13.33□□□□□ -0.27
SDC2-201ENST00000302190 FAM46AQ96IP4 442 aaKnown RBP13.33□□□□□ -0.27
SDC2-201ENST00000302190 OR2B2Q9GZK3 357 aa13.33□□□□□ -0.27
SDC2-201ENST00000302190 SLC22A4Q9H015 551 aa13.33□□□□□ -0.27
SDC2-201ENST00000302190 DUSP21Q9H596 190 aa13.33□□□□□ -0.27
SDC2-201ENST00000302190 MRPS30Q9NP92 439 aaKnown RBP13.33□□□□□ -0.27
SDC2-201ENST00000302190 ING3Q9NXR8 418 aa13.33□□□□□ -0.27
SDC2-201ENST00000302190 MRPL39Q9NYK5 338 aaKnown RBP13.33□□□□□ -0.27
SDC2-201ENST00000302190 UGT2A1Q9Y4X1 527 aa13.33□□□□□ -0.27
SDC2-201ENST00000302190 CSNK1G3Q9Y6M4 447 aa13.33□□□□□ -0.27
SDC2-201ENST00000302190 SYT6Q5T7P8 510 aaPredicted RBP13.33□□□□□ -0.28
SDC2-201ENST00000302190 CNKSR3Q6P9H4 555 aa13.33□□□□□ -0.28
SDC2-201ENST00000302190 TUBA3EQ6PEY2 450 aa13.33□□□□□ -0.28
SDC2-201ENST00000302190 SLC16A12Q6ZSM3 486 aa13.33□□□□□ -0.28
SDC2-201ENST00000302190 PARS2Q7L3T8 475 aaKnown RBP13.33□□□□□ -0.28
SDC2-201ENST00000302190 DMRT3Q9NQL9 472 aa13.33□□□□□ -0.28
SDC2-201ENST00000302190 ZFR2Q9UPR6 939 aaKnown RBP13.33□□□□□ -0.28
SDC2-201ENST00000302190 YARS2Q9Y2Z4 477 aaKnown RBP13.33□□□□□ -0.28
SDC2-201ENST00000302190 MYOFQ9NZM1 2061 aa13.33□□□□□ -0.28
SDC2-201ENST00000302190 RP1P56715 2156 aa13.33□□□□□ -0.28
SDC2-201ENST00000302190 WDFY4Q6ZS81 3184 aa13.33□□□□□ -0.28
SDC2-201ENST00000302190 BTN3A3O00478 584 aa13.33□□□□□ -0.28
SDC2-201ENST00000302190 TOXO94900 526 aa13.33□□□□□ -0.28
SDC2-201ENST00000302190 MYL9P24844 172 aa13.33□□□□□ -0.28
SDC2-201ENST00000302190 PTGS2P35354 604 aa13.33□□□□□ -0.28
SDC2-201ENST00000302190 METAP1P53582 386 aa13.33□□□□□ -0.28
SDC2-201ENST00000302190 PRR5P85299 388 aa13.33□□□□□ -0.28
SDC2-201ENST00000302190 EIF4EBP2Q13542 120 aaPredicted RBP13.33□□□□□ -0.28
SDC2-201ENST00000302190 ODF4Q2M2E3 257 aa13.33□□□□□ -0.28
SDC2-201ENST00000302190 TCEAL5Q5H9L2 206 aa13.33□□□□□ -0.28
SDC2-201ENST00000302190 COL13A1Q5TAT6 717 aaPredicted RBP13.33□□□□□ -0.28
SDC2-201ENST00000302190 PLAG1Q6DJT9 500 aa13.33□□□□□ -0.28
SDC2-201ENST00000302190 MZT2AQ6P582 158 aa13.33□□□□□ -0.28
SDC2-201ENST00000302190 KLBQ86Z14 1044 aa13.33□□□□□ -0.28
SDC2-201ENST00000302190 LYSMD2Q8IV50 215 aa13.33□□□□□ -0.28
SDC2-201ENST00000302190 FATE1Q969F0 183 aa13.33□□□□□ -0.28
SDC2-201ENST00000302190 TOX2Q96NM4 488 aa13.33□□□□□ -0.28
SDC2-201ENST00000302190 CPNE5Q9HCH3 593 aa13.33□□□□□ -0.28
SDC2-201ENST00000302190 PSORS1C1Q9UIG5 152 aa13.33□□□□□ -0.28
SDC2-201ENST00000302190 SNX11Q9Y5W9 270 aa13.33□□□□□ -0.28
SDC2-201ENST00000302190 SPACA6W5XKT8 324 aa13.33□□□□□ -0.28
SDC2-201ENST00000302190 RALGAPA2Q2PPJ7 1873 aa13.33□□□□□ -0.28
SDC2-201ENST00000302190 DAPL1A0PJW8 107 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 J3QLW9 94 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 HCN1O60741 890 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 REM1O75628 298 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 NCR1O76036 304 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 VNN2O95498 520 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 ZNF19P17023 458 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 CD22P20273 847 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 UQCRC2P22695 453 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 PCGF2P35227 344 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 SLAMF1Q13291 335 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 C11orf88Q6PI97 169 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 LRRTM4Q86VH4 590 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 CPA6Q8N4T0 437 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 ATP6V1C2Q8NEY4 427 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 OR8J1Q8NGP2 316 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 ECHDC3Q96DC8 303 aa13.32□□□□□ -0.28
SDC2-201ENST00000302190 HRASLS5Q96KN8 279 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms