RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 SH3BGRL2Q9UJC5 107 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 SHOXO15266 292 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 PORP16435 677 aaPredicted RBP15.41■□□□□ 0.06
SSRP1-202ENST00000293880 BMXP51813 675 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 SLC27A4Q6P1M0 643 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 BBS10Q8TAM1 723 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 FNDC8Q8TC99 324 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 FRS2Q8WU20 508 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 PCNPQ8WW12 178 aaKnown RBP15.41■□□□□ 0.06
SSRP1-202ENST00000293880 TMIGD2Q96BF3 282 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 LRR1Q96L50 414 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 TSGA13Q96PP4 275 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 MRM3Q9HC36 420 aaKnown RBP15.41■□□□□ 0.06
SSRP1-202ENST00000293880 ASB6Q9NWX5 421 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 A0A096LPI6 279 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 KLF11O14901 512 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 LEFTY1O75610 366 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 IFNA10P01566 189 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 IFNA4P05014 189 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 SOX3P41225 446 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 GSCP56915 257 aaPredicted RBP15.41■□□□□ 0.06
SSRP1-202ENST00000293880 ZNF542PQ5EBM4 170 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 CES4AQ5XG92 561 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 ZNF705AQ6ZN79 300 aaPredicted RBP15.41■□□□□ 0.06
SSRP1-202ENST00000293880 ZNF514Q96K75 400 aaPredicted RBP15.41■□□□□ 0.06
SSRP1-202ENST00000293880 CNTNAP3BQ96NU0 1288 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 HINT2Q9BX68 163 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 MROH1Q8NDA8 1641 aa15.41■□□□□ 0.06
SSRP1-202ENST00000293880 POM121CA8CG34 1229 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 ANHXE9PGG2 379 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 RFPL2O75678 378 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 NDUFS1P28331 727 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 PYCR1P32322 319 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 ATP4BP51164 291 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 C6orf136Q5SQH8 315 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 FAM69BQ5VUD6 431 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 OR4K14Q8NGD5 310 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 KCTD13Q8WZ19 329 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 LGALS12Q96DT0 336 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 TGM7Q96PF1 710 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 NEDD4LQ96PU5 975 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 F2RL3Q96RI0 385 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 INPP5KQ9BT40 448 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 BCO2Q9BYV7 579 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 OR51B6Q9H340 312 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 CYP8B1Q9UNU6 501 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 GMDSO60547 372 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 ARAFP10398 606 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 FADDQ13158 208 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 UNC50Q53HI1 259 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 GKN2Q86XP6 184 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 MR1Q95460 341 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 SUSD3Q96L08 255 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 ADAMTS10Q9H324 1103 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 B4GALT6Q9UBX8 382 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 TMEM59LQ9UK28 342 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 TCRBV21S2A2A0A5A6 115 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 MEIS3P2A8K0S8 358 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 SDHDO14521 159 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 CSTAP01040 98 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 PER3P56645 1201 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 GALNT2Q10471 571 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 FAM205BPQ63HN1 556 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 RNF111Q6ZNA4 994 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 TIFABQ6ZNK6 161 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 TRMT10AQ8TBZ6 339 aaKnown RBP15.4■□□□□ 0.06
SSRP1-202ENST00000293880 RNF32Q9H0A6 362 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 ZNF442Q9H7R0 627 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 GLS2Q9UI32 602 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 RTCAO00442 366 aaKnown RBP15.4■□□□□ 0.06
SSRP1-202ENST00000293880 KNG1P01042 644 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 NPPAP01160 153 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 ADRB3P13945 408 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 CAPN3P20807 821 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 GSTM2P28161 218 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 NRIP1P48552 1158 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 PDSS1Q5T2R2 415 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 MRPL41Q8IXM3 137 aaKnown RBP15.4■□□□□ 0.06
SSRP1-202ENST00000293880 OR52P1PQ8NH57 321 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 DCUN1D4Q92564 292 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 CD300AQ9UGN4 299 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 CA5BQ9Y2D0 317 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 A0A0G2JLL6 359 aaPredicted RBP15.4■□□□□ 0.06
SSRP1-202ENST00000293880 A0A0U1RQS6 177 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 GRID2O43424 1007 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 PRMT2P55345 433 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 GK2Q14410 553 aaPredicted RBP15.4■□□□□ 0.06
SSRP1-202ENST00000293880 GSG1LQ6UXU4 331 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 TPRG1Q6ZUI0 275 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 PRRT2Q7Z6L0 340 aaPredicted RBP15.4■□□□□ 0.06
SSRP1-202ENST00000293880 OR4C15Q8NGM1 316 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 OR4K13Q8NH42 304 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 ZNF420Q8TAQ5 688 aaPredicted RBP15.4■□□□□ 0.06
SSRP1-202ENST00000293880 SLCO2A1Q92959 643 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 SCAMP4Q969E2 229 aa15.4■□□□□ 0.06
SSRP1-202ENST00000293880 FAM227AF5H4B4 570 aa15.39■□□□□ 0.05
SSRP1-202ENST00000293880 LATO43561 262 aa15.39■□□□□ 0.05
SSRP1-202ENST00000293880 PRAMEF11O60813 436 aa15.39■□□□□ 0.05
SSRP1-202ENST00000293880 SNAPC5O75971 98 aa15.39■□□□□ 0.05
SSRP1-202ENST00000293880 PPP1R3DO95685 299 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms