RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 IGFBP7Q16270 282 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 PRICKLE4Q2TBC4 344 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 PGS1Q32NB8 556 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 SPDYE7PQ495Y7 208 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 C6orf136Q5SQH8 315 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 ZNF468Q5VIY5 522 aaPredicted RBP6.06□□□□□ -1.44
CD44-204ENST00000279452 FAM71E1Q6IPT2 247 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 H3F3CQ6NXT2 135 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 OPN5Q6U736 354 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 IGFL2Q6UWQ7 119 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 FAM47EQ6ZV65 393 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 GALNTL5Q7Z4T8 443 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 R3HCC1LQ7Z5L2 792 aaKnown RBP6.06□□□□□ -1.44
CD44-204ENST00000279452 PRR22Q8IZ63 422 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 TAGAPQ8N103 731 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 FAM13CQ8NE31 585 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 OR7G1Q8NGA0 311 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 OR52R1Q8NGF1 315 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 ZNF75CPQ92670 426 aaPredicted RBP6.06□□□□□ -1.44
CD44-204ENST00000279452 CIDECQ96AQ7 238 aaPredicted RBP6.06□□□□□ -1.44
CD44-204ENST00000279452 C11orf24Q96F05 449 aaPredicted RBP6.06□□□□□ -1.44
CD44-204ENST00000279452 CHMP6Q96FZ7 201 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 RASL10BQ96S79 203 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 PRPF18Q99633 342 aaKnown RBP6.06□□□□□ -1.44
CD44-204ENST00000279452 ITPAQ9BY32 194 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 HES7Q9BYE0 225 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 WWTR1Q9GZV5 400 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 RNF32Q9H0A6 362 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 OR10A5Q9H207 317 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 REEP4Q9H6H4 257 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 WDR55Q9H6Y2 383 aaPredicted RBP6.06□□□□□ -1.44
CD44-204ENST00000279452 AKTIPQ9H8T0 292 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 ANKRA2Q9H9E1 313 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 TIMMDC1Q9NPL8 285 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 EQTNQ9NQ60 294 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 AGPAT4Q9NRZ5 378 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 ZNF446Q9NWS9 450 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 SIRT5Q9NXA8 310 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 MAT2BQ9NZL9 334 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 EHD3Q9NZN3 535 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 CES1P1Q9UKY3 287 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 PPIEQ9UNP9 301 aaKnown RBP6.06□□□□□ -1.44
CD44-204ENST00000279452 CFL2Q9Y281 166 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 WBP11Q9Y2W2 641 aaKnown RBP6.06□□□□□ -1.44
CD44-204ENST00000279452 PCDHGA10Q9Y5H3 936 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 PTPRQQ9UMZ3 2332 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 ANKRD11Q6UB99 2663 aaPredicted RBP6.06□□□□□ -1.44
CD44-204ENST00000279452 NPIPB8E9PQR5 432 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 SLCO1B7G3V0H7 640 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 HDAC3O15379 428 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 COQ9O75208 318 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 SNNO75324 88 aaPredicted RBP6.05□□□□□ -1.44
CD44-204ENST00000279452 NME6O75414 186 aaPredicted RBP6.05□□□□□ -1.44
CD44-204ENST00000279452 IGKV3-11P04433 115 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 P04436 131 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 SP1P08047 785 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 ABCB1P08183 1280 aaPredicted RBP6.05□□□□□ -1.44
CD44-204ENST00000279452 G6PDP11413 515 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 PRPS1L1P21108 318 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 GPX3P22352 226 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 EPHA3P29320 983 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 GALNSP34059 522 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 KRT20P35900 424 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 RFC3P40938 356 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 MC3RP41968 323 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 RFX3P48380 749 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 TMED10P49755 219 aaKnown RBP6.05□□□□□ -1.44
CD44-204ENST00000279452 PRKAG1P54619 331 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 MANFP55145 182 aaKnown RBP6.05□□□□□ -1.44
CD44-204ENST00000279452 SLC37A1P57057 533 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 KCNJ2P63252 427 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 OCRLQ01968 901 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 PLGLB1Q02325 96 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 EMX2Q04743 252 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 SRSF11Q05519 484 aaKnown RBP6.05□□□□□ -1.44
CD44-204ENST00000279452 PLCXD2Q0VAA5 305 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 RPS6KA2Q15349 733 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 ZNHIT3Q15649 155 aaPredicted RBP6.05□□□□□ -1.44
CD44-204ENST00000279452 TRMT12Q53H54 448 aaKnown RBP6.05□□□□□ -1.44
CD44-204ENST00000279452 ZNF385BQ569K4 471 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 ZNF628Q5EBL2 1059 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 CPTPQ5TA50 214 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 PRAMEF20Q5VT98 475 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 SLC25A25Q6KCM7 469 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 TMEM64Q6YI46 380 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 RTL4Q6ZR62 310 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 ACAD11Q709F0 780 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 ZNF551Q7Z340 670 aaPredicted RBP6.05□□□□□ -1.44
CD44-204ENST00000279452 WDR75Q8IWA0 830 aaKnown RBP6.05□□□□□ -1.44
CD44-204ENST00000279452 ARFGAP2Q8N6H7 521 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 KRTCAP2Q8N6L1 136 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 BCORP1Q8N888 145 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 Q8NA96 180 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 MDS2Q8NDY4 140 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 SIMC1Q8NDZ2 872 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 OR7A2PQ8NGA2 310 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 OR8K3Q8NH51 312 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 C16orf52Q8NHV5 167 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 NUBPLQ8TB37 319 aa6.05□□□□□ -1.44
CD44-204ENST00000279452 FBXO30Q8TB52 745 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms