RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 ZFR2Q9UPR6 939 aaKnown RBP13.31□□□□□ -0.28
CDH3-201ENST00000264012 DNMT3AQ9Y6K1 912 aaPredicted RBP13.31□□□□□ -0.28
CDH3-201ENST00000264012 SLC1A7O00341 560 aa13.31□□□□□ -0.28
CDH3-201ENST00000264012 SDC3O75056 442 aa13.31□□□□□ -0.28
CDH3-201ENST00000264012 ADAP00813 363 aa13.31□□□□□ -0.28
CDH3-201ENST00000264012 PRLP01236 227 aa13.31□□□□□ -0.28
CDH3-201ENST00000264012 C1SP09871 688 aa13.31□□□□□ -0.28
CDH3-201ENST00000264012 PRLHRP49683 370 aa13.31□□□□□ -0.28
CDH3-201ENST00000264012 ADAM15Q13444 863 aa13.31□□□□□ -0.28
CDH3-201ENST00000264012 PTPRRQ15256 657 aa13.31□□□□□ -0.28
CDH3-201ENST00000264012 LHFPL3Q86UP9 236 aa13.31□□□□□ -0.28
CDH3-201ENST00000264012 CDH10Q9Y6N8 788 aa13.31□□□□□ -0.28
CDH3-201ENST00000264012 WRBO00258 174 aa13.31□□□□□ -0.28
CDH3-201ENST00000264012 TSPAN9O75954 239 aa13.31□□□□□ -0.28
CDH3-201ENST00000264012 ITIH1P19827 911 aa13.31□□□□□ -0.28
CDH3-201ENST00000264012 MAPK3P27361 379 aaPredicted RBP13.31□□□□□ -0.28
CDH3-201ENST00000264012 CERS1P27544 350 aa13.31□□□□□ -0.28
CDH3-201ENST00000264012 DCTP40126 519 aa13.31□□□□□ -0.28
CDH3-201ENST00000264012 ENTPD1P49961 510 aa13.31□□□□□ -0.28
CDH3-201ENST00000264012 ARPC4P59998 168 aa13.31□□□□□ -0.28
CDH3-201ENST00000264012 CRYZQ08257 329 aaKnown RBP13.31□□□□□ -0.28
CDH3-201ENST00000264012 CHAF1BQ13112 559 aa13.31□□□□□ -0.28
CDH3-201ENST00000264012 ARHGAP19Q14CB8 494 aa13.31□□□□□ -0.28
CDH3-201ENST00000264012 GTF2IRD2BQ6EKJ0 949 aa13.31□□□□□ -0.28
CDH3-201ENST00000264012 GTF2IRD2Q86UP8 949 aa13.31□□□□□ -0.28
CDH3-201ENST00000264012 SNX29P2Q8IUI4 249 aa13.31□□□□□ -0.28
CDH3-201ENST00000264012 PLXDC1Q8IUK5 500 aa13.31□□□□□ -0.28
CDH3-201ENST00000264012 RBM12BQ8IXT5 1001 aaKnown RBP13.31□□□□□ -0.28
CDH3-201ENST00000264012 FAM86B1Q8N7N1 296 aa13.31□□□□□ -0.28
CDH3-201ENST00000264012 C15orf40Q8WUR7 153 aa13.31□□□□□ -0.28
CDH3-201ENST00000264012 MMP27Q9H306 513 aa13.31□□□□□ -0.28
CDH3-201ENST00000264012 HSPE1-MOB4S4R3N1 261 aa13.31□□□□□ -0.28
CDH3-201ENST00000264012 KNL1Q8NG31 2342 aa13.31□□□□□ -0.28
CDH3-201ENST00000264012 RNASET2O00584 256 aaKnown RBP13.31□□□□□ -0.28
CDH3-201ENST00000264012 NDUFV2P19404 249 aa13.31□□□□□ -0.28
CDH3-201ENST00000264012 DDCP20711 480 aa13.31□□□□□ -0.28
CDH3-201ENST00000264012 ENDOUP21128 410 aaKnown RBP13.31□□□□□ -0.28
CDH3-201ENST00000264012 MYF6P23409 242 aa13.31□□□□□ -0.28
CDH3-201ENST00000264012 OR8H1Q8NGG4 311 aa13.31□□□□□ -0.28
CDH3-201ENST00000264012 PNPLA2Q96AD5 504 aa13.31□□□□□ -0.28
CDH3-201ENST00000264012 ACTRT3Q9BYD9 372 aa13.31□□□□□ -0.28
CDH3-201ENST00000264012 POLE3Q9NRF9 147 aa13.31□□□□□ -0.28
CDH3-201ENST00000264012 SAGE1Q9NXZ1 904 aa13.31□□□□□ -0.28
CDH3-201ENST00000264012 CCL26Q9Y258 94 aa13.31□□□□□ -0.28
CDH3-201ENST00000264012 DDX60LQ5H9U9 1706 aaKnown RBP13.3□□□□□ -0.28
CDH3-201ENST00000264012 TOGARAM1Q9Y4F4 1720 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 TP53I11O14683 189 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 PROS1P07225 676 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 GPR4P46093 362 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 HK3P52790 923 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 HNRNPA0Q13151 305 aaKnown RBP13.3□□□□□ -0.28
CDH3-201ENST00000264012 VEZF1Q14119 521 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 Q6ZSR6 202 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 SLC22A16Q86VW1 577 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 TSPYL5Q86VY4 417 aaPredicted RBP13.3□□□□□ -0.28
CDH3-201ENST00000264012 FRS2Q8WU20 508 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 C17orf50Q8WW18 174 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 MTHFD2LQ9H903 347 aaPredicted RBP13.3□□□□□ -0.28
CDH3-201ENST00000264012 CD207Q9UJ71 328 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 DKKL1Q9UK85 242 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 PLCL2Q9UPR0 1127 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 PCDHGB5Q9Y5G0 923 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 ENTPD2Q9Y5L3 495 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 FAM78AQ5JUQ0 283 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 TMEM236Q5W0B7 351 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 GPALPP1Q8IXQ4 340 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 ADAMTS18Q8TE60 1221 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 KCNN1Q92952 543 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 SLC29A1Q99808 456 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 ORAI3Q9BRQ5 295 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 SORBS1Q9BX66 1292 aaKnown RBP13.3□□□□□ -0.28
CDH3-201ENST00000264012 CST11Q9H112 138 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 CCDC59Q9P031 241 aaKnown RBP13.3□□□□□ -0.28
CDH3-201ENST00000264012 PLD2O14939 933 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 FLRT2O43155 660 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 PEPDP12955 493 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 IRF4Q15306 451 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 SPHARQ15513 63 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 TCTE1Q5JU00 501 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 PDSS1Q5T2R2 415 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 PLEKHG7Q6ZR37 379 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 GPAT4Q86UL3 456 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 ARMC10Q8N2F6 343 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 OR2L3Q8NG85 312 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 SETD6Q8TBK2 473 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 FNDC8Q8TC99 324 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 UTP4Q969X6 686 aaKnown RBP13.3□□□□□ -0.28
CDH3-201ENST00000264012 TBC1D24Q9ULP9 559 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 CMAHPQ9Y471 501 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 TNRC6CQ9HCJ0 1690 aaKnown RBP13.3□□□□□ -0.28
CDH3-201ENST00000264012 IGLV3-10A0A075B6K4 115 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 LAMTOR5O43504 91 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 GJA4P35212 333 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 RUNDC3AQ59EK9 446 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 RPS26P11Q5JNZ5 115 aaPredicted RBP13.3□□□□□ -0.28
CDH3-201ENST00000264012 ADGRG5Q8IZF4 528 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 SGTBQ96EQ0 304 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 METTL2AQ96IZ6 378 aaKnown RBP13.3□□□□□ -0.28
CDH3-201ENST00000264012 SLC30A3Q99726 388 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 CHIAQ9BZP6 476 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms