RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 ULK2Q8IYT8 1036 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 CACTIN-AS1Q8N1I8 211 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 GALNT15Q8N3T1 639 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 NATD1Q8N6N6 113 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 ZNF321PQ8N8H1 164 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 ENDOVQ8N8Q3 282 aaKnown RBP9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 OR10A6Q8NH74 314 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 PSMA8Q8TAA3 256 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 FBXO30Q8TB52 745 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 CT55Q8WUE5 264 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 C8orf44Q96CB5 159 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 CCDC124Q96CT7 223 aaKnown RBP9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 RBM18Q96H35 190 aaKnown RBP9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 SLC46A1Q96NT5 459 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 DGAT2Q96PD7 388 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 DPH2Q9BQC3 489 aaPredicted RBP9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 SERHL2Q9H4I8 314 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 CXorf21Q9HAI6 301 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 SPAG4Q9NPE6 437 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 EQTNQ9NQ60 294 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 NDE1Q9NXR1 346 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 MAT2BQ9NZL9 334 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 ABCD2Q9UBJ2 740 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 CD300AQ9UGN4 299 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 C3orf18Q9UK00 162 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 PADI1Q9ULC6 663 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 PTRH2Q9Y3E5 179 aaKnown RBP9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 MMACHCQ9Y4U1 282 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 AKAP13Q12802 2813 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 TCRBV16S1A1N1A0A5B0 115 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 A8MUI8 341 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 ALOX12BO75342 701 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 KLF7O75840 302 aaPredicted RBP9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 UMODP07911 640 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 CCNYL3P0C7X3 344 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 ETFAP13804 333 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 S1PR1P21453 382 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 IL10P22301 178 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 F8A1P23610 371 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 SSTR4P31391 388 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 CRATP43155 626 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 GSK3BP49841 420 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 GZMMP51124 257 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 MVDP53602 400 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 EMP2P54851 167 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 OR4D2P58180 307 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 MS4A2Q01362 244 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 LRRC74AQ0VAA2 488 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 FOXC1Q12948 553 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 RGNQ15493 299 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 FHL5Q5TD97 284 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 SAXO2Q658L1 398 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 CPZQ66K79 652 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 TNFAIP8L2Q6P589 184 aaPredicted RBP9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 PGM2L1Q6PCE3 622 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 GPR155Q7Z3F1 870 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 ANKRD37Q7Z713 158 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 SAMD14Q8IZD0 417 aaPredicted RBP9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 ST13P4Q8IZP2 240 aaPredicted RBP9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 HORMAD2Q8N7B1 307 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 TRIML2Q8N7C3 387 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 PLPP5Q8NEB5 264 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 NUP43Q8NFH3 380 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 OR8J3Q8NGG0 315 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 DNAJB8Q8NHS0 232 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 PTPMT1Q8WUK0 201 aaPredicted RBP9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 RAB8BQ92930 207 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 RIT1Q92963 219 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 ZNF583Q96ND8 569 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 ECSITQ9BQ95 431 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 CRB3Q9BUF7 120 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 PCDHAC1Q9H158 963 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 SLC26A1Q9H2B4 701 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 KAT8Q9H7Z6 458 aaKnown RBP9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 NEUROD4Q9HD90 331 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 ADAP2Q9NPF8 381 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 ZCCHC3Q9NUD5 404 aaKnown RBP9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 EGFL7Q9UHF1 273 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 SLC7A8Q9UHI5 535 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 PCDHGA8Q9Y5G5 932 aa9.09□□□□□ -0.95
SNRNP40-201ENST00000263694 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.08□□□□□ -0.96
SNRNP40-201ENST00000263694 EVPLLA8MZ36 301 aa9.08□□□□□ -0.96
SNRNP40-201ENST00000263694 C17orf105B2RV13 164 aa9.08□□□□□ -0.96
SNRNP40-201ENST00000263694 C9J4A7 227 aa9.08□□□□□ -0.96
SNRNP40-201ENST00000263694 EMC8O43402 210 aa9.08□□□□□ -0.96
SNRNP40-201ENST00000263694 PRKNO60260 465 aaPredicted RBP9.08□□□□□ -0.96
SNRNP40-201ENST00000263694 DNAJA2O60884 412 aa9.08□□□□□ -0.96
SNRNP40-201ENST00000263694 CBX7O95931 251 aa9.08□□□□□ -0.96
SNRNP40-201ENST00000263694 ALBP02768 609 aa9.08□□□□□ -0.96
SNRNP40-201ENST00000263694 HMGN2P05204 90 aaKnown RBP9.08□□□□□ -0.96
SNRNP40-201ENST00000263694 NCK1P16333 377 aa9.08□□□□□ -0.96
SNRNP40-201ENST00000263694 RBMS1P29558 406 aaKnown RBP9.08□□□□□ -0.96
SNRNP40-201ENST00000263694 MAP4K2Q12851 820 aa9.08□□□□□ -0.96
SNRNP40-201ENST00000263694 CAMK2BQ13554 666 aa9.08□□□□□ -0.96
SNRNP40-201ENST00000263694 SERTAD2Q14140 314 aa9.08□□□□□ -0.96
SNRNP40-201ENST00000263694 MAP7Q14244 749 aa9.08□□□□□ -0.96
SNRNP40-201ENST00000263694 NCF4Q15080 339 aa9.08□□□□□ -0.96
SNRNP40-201ENST00000263694 TGIF1Q15583 401 aa9.08□□□□□ -0.96
SNRNP40-201ENST00000263694 SFT2D3Q587I9 215 aa9.08□□□□□ -0.96
SNRNP40-201ENST00000263694 OLIG3Q7RTU3 272 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms