RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 ERN2Q76MJ5 926 aaKnown RBP17.46■□□□□ 0.39
LRP3-201ENST00000253193 ZNF547Q8IVP9 402 aa17.46■□□□□ 0.39
LRP3-201ENST00000253193 FLCNQ8NFG4 579 aa17.46■□□□□ 0.39
LRP3-201ENST00000253193 GOT1L1Q8NHS2 421 aaPredicted RBP17.46■□□□□ 0.39
LRP3-201ENST00000253193 ANKRA2Q9H9E1 313 aa17.46■□□□□ 0.39
LRP3-201ENST00000253193 CNIH4Q9P003 139 aa17.46■□□□□ 0.39
LRP3-201ENST00000253193 DKK3Q9UBP4 350 aa17.46■□□□□ 0.39
LRP3-201ENST00000253193 TMEM229AB2RXF0 380 aa17.46■□□□□ 0.39
LRP3-201ENST00000253193 SLC30A4O14863 429 aa17.46■□□□□ 0.39
LRP3-201ENST00000253193 CLEC2LP0C7M8 214 aa17.46■□□□□ 0.39
LRP3-201ENST00000253193 DDX6P26196 483 aaKnown RBP eCLIP17.46■□□□□ 0.39
LRP3-201ENST00000253193 SIGLEC11Q96RL6 698 aa17.46■□□□□ 0.39
LRP3-201ENST00000253193 TMED9Q9BVK6 235 aa17.46■□□□□ 0.39
LRP3-201ENST00000253193 RHBGQ9H310 441 aa17.46■□□□□ 0.39
LRP3-201ENST00000253193 N6AMT1Q9Y5N5 214 aa17.46■□□□□ 0.39
LRP3-201ENST00000253193 F5P12259 2224 aa17.46■□□□□ 0.39
LRP3-201ENST00000253193 TMPRSS11DO60235 418 aa17.46■□□□□ 0.39
LRP3-201ENST00000253193 C21orf58P58505 322 aa17.46■□□□□ 0.39
LRP3-201ENST00000253193 ELAVL3Q14576 367 aaKnown RBP17.46■□□□□ 0.39
LRP3-201ENST00000253193 LRRC26Q2I0M4 334 aa17.46■□□□□ 0.39
LRP3-201ENST00000253193 TMEM107Q6UX40 140 aa17.46■□□□□ 0.39
LRP3-201ENST00000253193 MTSS1LQ765P7 747 aa17.46■□□□□ 0.39
LRP3-201ENST00000253193 ZNF614Q8N883 585 aa17.46■□□□□ 0.39
LRP3-201ENST00000253193 KIAA1958Q8N8K9 716 aa17.46■□□□□ 0.39
LRP3-201ENST00000253193 IL17RDQ8NFM7 739 aa17.46■□□□□ 0.39
LRP3-201ENST00000253193 NEURL3Q96EH8 262 aa17.46■□□□□ 0.39
LRP3-201ENST00000253193 PAWRQ96IZ0 340 aaKnown RBP17.46■□□□□ 0.39
LRP3-201ENST00000253193 OPALINQ96PE5 141 aa17.46■□□□□ 0.39
LRP3-201ENST00000253193 TM9SF2Q99805 663 aa17.46■□□□□ 0.39
LRP3-201ENST00000253193 PRKAG2Q9UGJ0 569 aa17.46■□□□□ 0.39
LRP3-201ENST00000253193 STUB1Q9UNE7 303 aa17.46■□□□□ 0.39
LRP3-201ENST00000253193 CMAHPQ9Y471 501 aa17.46■□□□□ 0.39
LRP3-201ENST00000253193 A0A1W2PQL4 384 aaPredicted RBP17.45■□□□□ 0.38
LRP3-201ENST00000253193 PRKYO43930 277 aa17.45■□□□□ 0.38
LRP3-201ENST00000253193 DPM1O60762 260 aa17.45■□□□□ 0.38
LRP3-201ENST00000253193 FGF19O95750 216 aa17.45■□□□□ 0.38
LRP3-201ENST00000253193 EFEMP2O95967 443 aa17.45■□□□□ 0.38
LRP3-201ENST00000253193 SGCGQ13326 291 aa17.45■□□□□ 0.38
LRP3-201ENST00000253193 SCN5AQ14524 2016 aa17.45■□□□□ 0.38
LRP3-201ENST00000253193 SSX1Q16384 188 aa17.45■□□□□ 0.38
LRP3-201ENST00000253193 ZNF311Q5JNZ3 666 aa17.45■□□□□ 0.38
LRP3-201ENST00000253193 ANKRD33Q7Z3H0 272 aa17.45■□□□□ 0.38
LRP3-201ENST00000253193 GPR32P1Q8NGA4 272 aa17.45■□□□□ 0.38
LRP3-201ENST00000253193 KAT2AQ92830 837 aa17.45■□□□□ 0.38
LRP3-201ENST00000253193 KCTD7Q96MP8 289 aa17.45■□□□□ 0.38
LRP3-201ENST00000253193 NELL2Q99435 816 aa17.45■□□□□ 0.38
LRP3-201ENST00000253193 CDCA4Q9BXL8 241 aa17.45■□□□□ 0.38
LRP3-201ENST00000253193 DPEP2Q9H4A9 486 aa17.45■□□□□ 0.38
LRP3-201ENST00000253193 EDDM13A0A1B0GTR0 161 aa17.45■□□□□ 0.38
LRP3-201ENST00000253193 ANKRD34BA5PLL1 514 aa17.45■□□□□ 0.38
LRP3-201ENST00000253193 FAM170BA6NMN3 283 aa17.45■□□□□ 0.38
LRP3-201ENST00000253193 PLD2O14939 933 aa17.45■□□□□ 0.38
LRP3-201ENST00000253193 LSM11P83369 360 aaKnown RBP eCLIP17.45■□□□□ 0.38
LRP3-201ENST00000253193 SLAMF1Q13291 335 aa17.45■□□□□ 0.38
LRP3-201ENST00000253193 IRF3Q14653 427 aa17.45■□□□□ 0.38
LRP3-201ENST00000253193 BHLHB9Q6PI77 547 aa17.45■□□□□ 0.38
LRP3-201ENST00000253193 SMARCD3Q6STE5 483 aa17.45■□□□□ 0.38
LRP3-201ENST00000253193 CPA6Q8N4T0 437 aa17.45■□□□□ 0.38
LRP3-201ENST00000253193 TBC1D19Q8N5T2 526 aa17.45■□□□□ 0.38
LRP3-201ENST00000253193 ANKRD53Q8N9V6 530 aa17.45■□□□□ 0.38
LRP3-201ENST00000253193 PHOX2BQ99453 314 aa17.45■□□□□ 0.38
LRP3-201ENST00000253193 TMEM245Q9H330 911 aa17.45■□□□□ 0.38
LRP3-201ENST00000253193 EGLN3Q9H6Z9 239 aa17.45■□□□□ 0.38
LRP3-201ENST00000253193 PLSCR3Q9NRY6 295 aa17.45■□□□□ 0.38
LRP3-201ENST00000253193 YARS2Q9Y2Z4 477 aaKnown RBP17.45■□□□□ 0.38
LRP3-201ENST00000253193 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.45■□□□□ 0.38
LRP3-201ENST00000253193 HMGN4O00479 90 aa17.45■□□□□ 0.38
LRP3-201ENST00000253193 SMSP52788 366 aa17.45■□□□□ 0.38
LRP3-201ENST00000253193 DDI2Q5TDH0 399 aa17.45■□□□□ 0.38
LRP3-201ENST00000253193 LCTLQ6UWM7 567 aa17.45■□□□□ 0.38
LRP3-201ENST00000253193 PDZD3Q86UT5 571 aa17.45■□□□□ 0.38
LRP3-201ENST00000253193 TBX5Q99593 518 aa17.45■□□□□ 0.38
LRP3-201ENST00000253193 SAGE1Q9NXZ1 904 aa17.45■□□□□ 0.38
LRP3-201ENST00000253193 FTSJ1Q9UET6 329 aa17.45■□□□□ 0.38
LRP3-201ENST00000253193 SLC35F4A4IF30 521 aa17.44■□□□□ 0.38
LRP3-201ENST00000253193 RAB36O95755 333 aa17.44■□□□□ 0.38
LRP3-201ENST00000253193 SCG5P05408 212 aa17.44■□□□□ 0.38
LRP3-201ENST00000253193 SDC2P34741 201 aa17.44■□□□□ 0.38
LRP3-201ENST00000253193 IFNGR2P38484 337 aa17.44■□□□□ 0.38
LRP3-201ENST00000253193 RGS8P57771 180 aaPredicted RBP17.44■□□□□ 0.38
LRP3-201ENST00000253193 ILKQ13418 452 aa17.44■□□□□ 0.38
LRP3-201ENST00000253193 PDE7AQ13946 482 aa17.44■□□□□ 0.38
LRP3-201ENST00000253193 ELOAQ14241 798 aaKnown RBP17.44■□□□□ 0.38
LRP3-201ENST00000253193 GPR19Q15760 415 aa17.44■□□□□ 0.38
LRP3-201ENST00000253193 ZNF77Q15935 545 aa17.44■□□□□ 0.38
LRP3-201ENST00000253193 ZNF57Q68EA5 555 aaPredicted RBP17.44■□□□□ 0.38
LRP3-201ENST00000253193 PGBD2Q6P3X8 592 aa17.44■□□□□ 0.38
LRP3-201ENST00000253193 ADGRF3Q8IZF5 1079 aa17.44■□□□□ 0.38
LRP3-201ENST00000253193 AMER3Q8N944 861 aa17.44■□□□□ 0.38
LRP3-201ENST00000253193 MRPL43Q8N983 215 aaKnown RBP17.44■□□□□ 0.38
LRP3-201ENST00000253193 WFIKKN2Q8TEU8 576 aa17.44■□□□□ 0.38
LRP3-201ENST00000253193 RNFT2Q96EX2 444 aa17.44■□□□□ 0.38
LRP3-201ENST00000253193 SDHCQ99643 169 aaPredicted RBP17.44■□□□□ 0.38
LRP3-201ENST00000253193 OR52A4PA6NMU1 304 aa17.44■□□□□ 0.38
LRP3-201ENST00000253193 HMGN2P05204 90 aaKnown RBP17.44■□□□□ 0.38
LRP3-201ENST00000253193 GIPRP48546 466 aa17.44■□□□□ 0.38
LRP3-201ENST00000253193 PLEKHM3Q6ZWE6 761 aa17.44■□□□□ 0.38
LRP3-201ENST00000253193 OR6T1Q8NGN1 323 aa17.44■□□□□ 0.38
LRP3-201ENST00000253193 COQ10AQ96MF6 247 aa17.44■□□□□ 0.38
LRP3-201ENST00000253193 TTYH2Q9BSA4 534 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms