RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 CPTPQ5TA50 214 aa12.71□□□□□ -0.37
UPK1A-201ENST00000222275 HIST2H2BCQ6DN03 193 aa12.71□□□□□ -0.37
UPK1A-201ENST00000222275 CPLX4Q7Z7G2 160 aa12.71□□□□□ -0.37
UPK1A-201ENST00000222275 VPS37AQ8NEZ2 397 aa12.71□□□□□ -0.37
UPK1A-201ENST00000222275 B3GNT7Q8NFL0 401 aa12.71□□□□□ -0.37
UPK1A-201ENST00000222275 RIT1Q92963 219 aa12.71□□□□□ -0.37
UPK1A-201ENST00000222275 EXOSC8Q96B26 276 aaKnown RBP12.71□□□□□ -0.37
UPK1A-201ENST00000222275 ERP27Q96DN0 273 aa12.71□□□□□ -0.37
UPK1A-201ENST00000222275 ZBED6CLQ96FA7 236 aaPredicted RBP12.71□□□□□ -0.37
UPK1A-201ENST00000222275 IMMP1LQ96LU5 166 aa12.71□□□□□ -0.37
UPK1A-201ENST00000222275 PSMG3-AS1Q96PY0 264 aa12.71□□□□□ -0.37
UPK1A-201ENST00000222275 OR52B2Q96RD2 323 aa12.71□□□□□ -0.37
UPK1A-201ENST00000222275 BRINP2Q9C0B6 783 aa12.71□□□□□ -0.37
UPK1A-201ENST00000222275 ZNF160Q9HCG1 818 aa12.71□□□□□ -0.37
UPK1A-201ENST00000222275 ZIM2Q9NZV7 527 aa12.71□□□□□ -0.37
UPK1A-201ENST00000222275 SH3BP4Q9P0V3 963 aa12.71□□□□□ -0.37
UPK1A-201ENST00000222275 COPS7AQ9UBW8 275 aa12.71□□□□□ -0.37
UPK1A-201ENST00000222275 DCTN4Q9UJW0 460 aa12.71□□□□□ -0.37
UPK1A-201ENST00000222275 CLDN16Q9Y5I7 305 aa12.71□□□□□ -0.37
UPK1A-201ENST00000222275 IGHV3-20A0A0C4DH32 117 aa12.7□□□□□ -0.38
UPK1A-201ENST00000222275 CDK2AP1O14519 115 aa12.7□□□□□ -0.38
UPK1A-201ENST00000222275 PDPK1O15530 556 aa12.7□□□□□ -0.38
UPK1A-201ENST00000222275 AKAP10O43572 662 aa12.7□□□□□ -0.38
UPK1A-201ENST00000222275 BCAS2O75934 225 aaPredicted RBP12.7□□□□□ -0.38
UPK1A-201ENST00000222275 SEC24DO94855 1032 aaPredicted RBP12.7□□□□□ -0.38
UPK1A-201ENST00000222275 LRATO95237 230 aa12.7□□□□□ -0.38
UPK1A-201ENST00000222275 IFI6P09912 130 aa12.7□□□□□ -0.38
UPK1A-201ENST00000222275 MRPL19P49406 292 aaKnown RBP12.7□□□□□ -0.38
UPK1A-201ENST00000222275 CLCN2P51788 898 aa12.7□□□□□ -0.38
UPK1A-201ENST00000222275 SLC26A5P58743 744 aa12.7□□□□□ -0.38
UPK1A-201ENST00000222275 ID2Q02363 134 aa12.7□□□□□ -0.38
UPK1A-201ENST00000222275 LRRC74AQ0VAA2 488 aa12.7□□□□□ -0.38
UPK1A-201ENST00000222275 SPRED3Q2MJR0 410 aa12.7□□□□□ -0.38
UPK1A-201ENST00000222275 BTBD16Q32M84 506 aa12.7□□□□□ -0.38
UPK1A-201ENST00000222275 CAMKMTQ7Z624 323 aa12.7□□□□□ -0.38
UPK1A-201ENST00000222275 GALNT12Q8IXK2 581 aa12.7□□□□□ -0.38
UPK1A-201ENST00000222275 MIER2Q8N344 545 aa12.7□□□□□ -0.38
UPK1A-201ENST00000222275 GALNT11Q8NCW6 608 aa12.7□□□□□ -0.38
UPK1A-201ENST00000222275 CLHC1Q8NHS4 586 aa12.7□□□□□ -0.38
UPK1A-201ENST00000222275 TESCQ96BS2 214 aa12.7□□□□□ -0.38
UPK1A-201ENST00000222275 CNRIP1Q96F85 164 aaPredicted RBP12.7□□□□□ -0.38
UPK1A-201ENST00000222275 VMP1Q96GC9 406 aa12.7□□□□□ -0.38
UPK1A-201ENST00000222275 THOC3Q96J01 351 aaKnown RBP12.7□□□□□ -0.38
UPK1A-201ENST00000222275 ZNF681Q96N22 645 aa12.7□□□□□ -0.38
UPK1A-201ENST00000222275 BARD1Q99728 777 aaKnown RBP12.7□□□□□ -0.38
UPK1A-201ENST00000222275 WDR77Q9BQA1 342 aaPredicted RBP12.7□□□□□ -0.38
UPK1A-201ENST00000222275 EBF4Q9BQW3 602 aa12.7□□□□□ -0.38
UPK1A-201ENST00000222275 BHLHE41Q9C0J9 482 aaPredicted RBP12.7□□□□□ -0.38
UPK1A-201ENST00000222275 MMP25Q9NPA2 562 aa12.7□□□□□ -0.38
UPK1A-201ENST00000222275 SLAMF7Q9NQ25 335 aa12.7□□□□□ -0.38
UPK1A-201ENST00000222275 ACSS1Q9NUB1 689 aaPredicted RBP12.7□□□□□ -0.38
UPK1A-201ENST00000222275 PLA2G3Q9NZ20 509 aa12.7□□□□□ -0.38
UPK1A-201ENST00000222275 TEKT2Q9UIF3 430 aa12.7□□□□□ -0.38
UPK1A-201ENST00000222275 B3GNT3Q9Y2A9 372 aa12.7□□□□□ -0.38
UPK1A-201ENST00000222275 PCDHGA10Q9Y5H3 936 aa12.7□□□□□ -0.38
UPK1A-201ENST00000222275 GPR45Q9Y5Y3 372 aa12.7□□□□□ -0.38
UPK1A-201ENST00000222275 CROCCQ5TZA2 2017 aa12.7□□□□□ -0.38
UPK1A-201ENST00000222275 GABRR3A8MPY1 467 aa12.69□□□□□ -0.38
UPK1A-201ENST00000222275 MYO1GB0I1T2 1018 aa12.69□□□□□ -0.38
UPK1A-201ENST00000222275 TGFBR3LH3BV60 316 aa12.69□□□□□ -0.38
UPK1A-201ENST00000222275 SLC22A3O75751 556 aa12.69□□□□□ -0.38
UPK1A-201ENST00000222275 WISP2O76076 250 aa12.69□□□□□ -0.38
UPK1A-201ENST00000222275 CBX6O95503 412 aa12.69□□□□□ -0.38
UPK1A-201ENST00000222275 ALDOCP09972 364 aaKnown RBP12.69□□□□□ -0.38
UPK1A-201ENST00000222275 NT5EP21589 574 aa12.69□□□□□ -0.38
UPK1A-201ENST00000222275 FEN1P39748 380 aaKnown RBP12.69□□□□□ -0.38
UPK1A-201ENST00000222275 ST13P50502 369 aaKnown RBP12.69□□□□□ -0.38
UPK1A-201ENST00000222275 ATP4BP51164 291 aa12.69□□□□□ -0.38
UPK1A-201ENST00000222275 MAP4K2Q12851 820 aa12.69□□□□□ -0.38
UPK1A-201ENST00000222275 ANXA8L1Q5VT79 327 aa12.69□□□□□ -0.38
UPK1A-201ENST00000222275 B3GNTL1Q67FW5 361 aaPredicted RBP12.69□□□□□ -0.38
UPK1A-201ENST00000222275 LINC00696Q6ZRV3 163 aa12.69□□□□□ -0.38
UPK1A-201ENST00000222275 MTERF4Q7Z6M4 381 aaKnown RBP12.69□□□□□ -0.38
UPK1A-201ENST00000222275 ZGRF1Q86YA3 2104 aa12.69□□□□□ -0.38
UPK1A-201ENST00000222275 RIMKLAQ8IXN7 391 aa12.69□□□□□ -0.38
UPK1A-201ENST00000222275 OR7G1Q8NGA0 311 aa12.69□□□□□ -0.38
UPK1A-201ENST00000222275 OR1N1Q8NGS0 311 aa12.69□□□□□ -0.38
UPK1A-201ENST00000222275 OR8K3Q8NH51 312 aa12.69□□□□□ -0.38
UPK1A-201ENST00000222275 ZNF675Q8TD23 568 aa12.69□□□□□ -0.38
UPK1A-201ENST00000222275 PTPMT1Q8WUK0 201 aaPredicted RBP12.69□□□□□ -0.38
UPK1A-201ENST00000222275 GFM2Q969S9 779 aaKnown RBP12.69□□□□□ -0.38
UPK1A-201ENST00000222275 COQ8BQ96D53 544 aa12.69□□□□□ -0.38
UPK1A-201ENST00000222275 FBXL20Q96IG2 436 aa12.69□□□□□ -0.38
UPK1A-201ENST00000222275 TMEM120AQ9BXJ8 343 aa12.69□□□□□ -0.38
UPK1A-201ENST00000222275 LHPPQ9H008 270 aa12.69□□□□□ -0.38
UPK1A-201ENST00000222275 SDR39U1Q9NRG7 319 aaPredicted RBP12.69□□□□□ -0.38
UPK1A-201ENST00000222275 EXO1Q9UQ84 846 aaKnown RBP12.69□□□□□ -0.38
UPK1A-201ENST00000222275 CFL2Q9Y281 166 aa12.69□□□□□ -0.38
UPK1A-201ENST00000222275 DIDO1Q9BTC0 2240 aaKnown RBP12.69□□□□□ -0.38
UPK1A-201ENST00000222275 WASHC1A8K0Z3 465 aa12.68□□□□□ -0.38
UPK1A-201ENST00000222275 A8MUA0 341 aa12.68□□□□□ -0.38
UPK1A-201ENST00000222275 E9PBE3 544 aa12.68□□□□□ -0.38
UPK1A-201ENST00000222275 ALPPP05187 535 aa12.68□□□□□ -0.38
UPK1A-201ENST00000222275 IL6P05231 212 aa12.68□□□□□ -0.38
UPK1A-201ENST00000222275 KIR3DL1P43629 444 aa12.68□□□□□ -0.38
UPK1A-201ENST00000222275 NCBP2P52298 156 aaKnown RBP eCLIP12.68□□□□□ -0.38
UPK1A-201ENST00000222275 GYS2P54840 703 aa12.68□□□□□ -0.38
UPK1A-201ENST00000222275 MANFP55145 182 aaKnown RBP12.68□□□□□ -0.38
UPK1A-201ENST00000222275 SQLEQ14534 574 aa12.68□□□□□ -0.38
UPK1A-201ENST00000222275 MLC1Q15049 377 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms