RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 B3GNT7Q8NFL0 401 aa25.4■■□□□ 1.66
CHMP4B-201ENST00000217402 ELP4Q96EB1 424 aa25.4■■□□□ 1.66
CHMP4B-201ENST00000217402 SENP5Q96HI0 755 aaPredicted RBP25.4■■□□□ 1.66
CHMP4B-201ENST00000217402 FBXL20Q96IG2 436 aa25.4■■□□□ 1.66
CHMP4B-201ENST00000217402 IP6K3Q96PC2 410 aa25.4■■□□□ 1.66
CHMP4B-201ENST00000217402 TUBB6Q9BUF5 446 aa25.4■■□□□ 1.66
CHMP4B-201ENST00000217402 TAF4O00268 1085 aa25.39■■□□□ 1.66
CHMP4B-201ENST00000217402 SLC26A5P58743 744 aa25.39■■□□□ 1.66
CHMP4B-201ENST00000217402 TLE3Q04726 772 aa25.39■■□□□ 1.66
CHMP4B-201ENST00000217402 BTBD16Q32M84 506 aa25.39■■□□□ 1.66
CHMP4B-201ENST00000217402 SPDYE7PQ495Y7 208 aa25.39■■□□□ 1.66
CHMP4B-201ENST00000217402 FAM91A1Q658Y4 838 aa25.39■■□□□ 1.66
CHMP4B-201ENST00000217402 REP15Q6BDI9 236 aa25.39■■□□□ 1.66
CHMP4B-201ENST00000217402 CCDC81Q6ZN84 652 aa25.39■■□□□ 1.66
CHMP4B-201ENST00000217402 CLEC4FQ8N1N0 589 aa25.39■■□□□ 1.66
CHMP4B-201ENST00000217402 MORN4Q8NDC4 146 aa25.39■■□□□ 1.66
CHMP4B-201ENST00000217402 NFAM1Q8NET5 270 aaPredicted RBP25.39■■□□□ 1.66
CHMP4B-201ENST00000217402 OR5AK3PQ8NH89 298 aa25.39■■□□□ 1.66
CHMP4B-201ENST00000217402 NCLNQ969V3 563 aa25.39■■□□□ 1.66
CHMP4B-201ENST00000217402 CTHRC1Q96CG8 243 aa25.39■■□□□ 1.66
CHMP4B-201ENST00000217402 CMTM5Q96DZ9 223 aa25.39■■□□□ 1.66
CHMP4B-201ENST00000217402 NPAS2Q99743 824 aa25.39■■□□□ 1.66
CHMP4B-201ENST00000217402 ARL8BQ9NVJ2 186 aa25.39■■□□□ 1.66
CHMP4B-201ENST00000217402 DDX18Q9NVP1 670 aaKnown RBP25.39■■□□□ 1.66
CHMP4B-201ENST00000217402 SSUH2Q9Y2M2 353 aa25.39■■□□□ 1.66
CHMP4B-201ENST00000217402 HPP00738 406 aa25.38■■□□□ 1.65
CHMP4B-201ENST00000217402 GAB1Q13480 694 aa25.38■■□□□ 1.65
CHMP4B-201ENST00000217402 BROXQ5VW32 411 aa25.38■■□□□ 1.65
CHMP4B-201ENST00000217402 ZSCAN1Q8NBB4 408 aa25.38■■□□□ 1.65
CHMP4B-201ENST00000217402 RCN3Q96D15 328 aa25.38■■□□□ 1.65
CHMP4B-201ENST00000217402 IMMP1LQ96LU5 166 aa25.38■■□□□ 1.65
CHMP4B-201ENST00000217402 TRIM4Q9C037 500 aa25.38■■□□□ 1.65
CHMP4B-201ENST00000217402 SLC6A13Q9NSD5 602 aa25.38■■□□□ 1.65
CHMP4B-201ENST00000217402 COPS7AQ9UBW8 275 aa25.38■■□□□ 1.65
CHMP4B-201ENST00000217402 ZFHX4Q86UP3 3567 aa25.38■■□□□ 1.65
CHMP4B-201ENST00000217402 BBIP1A8MTZ0 92 aa25.37■■□□□ 1.65
CHMP4B-201ENST00000217402 SLITRK5O94991 958 aa25.37■■□□□ 1.65
CHMP4B-201ENST00000217402 ANP32DO95626 131 aa25.37■■□□□ 1.65
CHMP4B-201ENST00000217402 CELA2AP08217 269 aa25.37■■□□□ 1.65
CHMP4B-201ENST00000217402 S1PR1P21453 382 aa25.37■■□□□ 1.65
CHMP4B-201ENST00000217402 ITPKBP27987 946 aa25.37■■□□□ 1.65
CHMP4B-201ENST00000217402 STX5Q13190 355 aa25.37■■□□□ 1.65
CHMP4B-201ENST00000217402 FHL5Q5TD97 284 aa25.37■■□□□ 1.65
CHMP4B-201ENST00000217402 ZNF621Q6ZSS3 439 aa25.37■■□□□ 1.65
CHMP4B-201ENST00000217402 PSMA8Q8TAA3 256 aa25.37■■□□□ 1.65
CHMP4B-201ENST00000217402 ZNF721Q8TF20 911 aa25.37■■□□□ 1.65
CHMP4B-201ENST00000217402 FAM120BQ96EK7 910 aaKnown RBP25.37■■□□□ 1.65
CHMP4B-201ENST00000217402 ART5Q96L15 291 aa25.37■■□□□ 1.65
CHMP4B-201ENST00000217402 NUDT9Q9BW91 350 aa25.37■■□□□ 1.65
CHMP4B-201ENST00000217402 IL1RL2Q9HB29 575 aa25.37■■□□□ 1.65
CHMP4B-201ENST00000217402 SLAMF8Q9P0V8 285 aa25.37■■□□□ 1.65
CHMP4B-201ENST00000217402 BCAP29Q9UHQ4 241 aa25.37■■□□□ 1.65
CHMP4B-201ENST00000217402 ZNF639Q9UID6 485 aa25.37■■□□□ 1.65
CHMP4B-201ENST00000217402 VPS4AQ9UN37 437 aa25.37■■□□□ 1.65
CHMP4B-201ENST00000217402 MAN2B2Q9Y2E5 1009 aa25.37■■□□□ 1.65
CHMP4B-201ENST00000217402 PLOD2O00469 737 aa25.37■■□□□ 1.65
CHMP4B-201ENST00000217402 MRASO14807 208 aa25.37■■□□□ 1.65
CHMP4B-201ENST00000217402 CBX7O95931 251 aa25.37■■□□□ 1.65
CHMP4B-201ENST00000217402 PRDX6P30041 224 aa25.37■■□□□ 1.65
CHMP4B-201ENST00000217402 CPA2P48052 419 aa25.37■■□□□ 1.65
CHMP4B-201ENST00000217402 FUT7Q11130 342 aa25.37■■□□□ 1.65
CHMP4B-201ENST00000217402 GTDC1Q4AE62 458 aa25.37■■□□□ 1.65
CHMP4B-201ENST00000217402 OR52R1Q8NGF1 315 aa25.37■■□□□ 1.65
CHMP4B-201ENST00000217402 OR1N1Q8NGS0 311 aa25.37■■□□□ 1.65
CHMP4B-201ENST00000217402 THAP4Q8WY91 577 aa25.37■■□□□ 1.65
CHMP4B-201ENST00000217402 ZCCHC3Q9NUD5 404 aaKnown RBP25.37■■□□□ 1.65
CHMP4B-201ENST00000217402 PTGFRNQ9P2B2 879 aa25.37■■□□□ 1.65
CHMP4B-201ENST00000217402 UPK1AO00322 258 aa25.36■■□□□ 1.65
CHMP4B-201ENST00000217402 PLOD3O60568 738 aa25.36■■□□□ 1.65
CHMP4B-201ENST00000217402 NME6O75414 186 aaPredicted RBP25.36■■□□□ 1.65
CHMP4B-201ENST00000217402 IGKV3-11P04433 115 aa25.36■■□□□ 1.65
CHMP4B-201ENST00000217402 PRKAG1P54619 331 aa25.36■■□□□ 1.65
CHMP4B-201ENST00000217402 DUSP8Q13202 625 aa25.36■■□□□ 1.65
CHMP4B-201ENST00000217402 NFYCQ13952 458 aa25.36■■□□□ 1.65
CHMP4B-201ENST00000217402 EXT1Q16394 746 aa25.36■■□□□ 1.65
CHMP4B-201ENST00000217402 CRTC2Q53ET0 693 aaPredicted RBP25.36■■□□□ 1.65
CHMP4B-201ENST00000217402 OR2L13Q8N349 312 aa25.36■■□□□ 1.65
CHMP4B-201ENST00000217402 KIF2BQ8N4N8 673 aa25.36■■□□□ 1.65
CHMP4B-201ENST00000217402 APCDD1LQ8NCL9 501 aa25.36■■□□□ 1.65
CHMP4B-201ENST00000217402 GOT1L1Q8NHS2 421 aaPredicted RBP25.36■■□□□ 1.65
CHMP4B-201ENST00000217402 PAIP1Q9H074 479 aaKnown RBP25.36■■□□□ 1.65
CHMP4B-201ENST00000217402 DMXL2Q8TDJ6 3036 aa25.36■■□□□ 1.65
CHMP4B-201ENST00000217402 URB1O60287 2271 aaKnown RBP25.35■■□□□ 1.65
CHMP4B-201ENST00000217402 A0A087WV62 115 aa25.35■■□□□ 1.65
CHMP4B-201ENST00000217402 A0A096LPI6 279 aa25.35■■□□□ 1.65
CHMP4B-201ENST00000217402 RNF103-CHMP3A0A140T963 221 aa25.35■■□□□ 1.65
CHMP4B-201ENST00000217402 ARGFXA6NJG6 315 aa25.35■■□□□ 1.65
CHMP4B-201ENST00000217402 KCNH1O95259 989 aa25.35■■□□□ 1.65
CHMP4B-201ENST00000217402 CBX6O95503 412 aa25.35■■□□□ 1.65
CHMP4B-201ENST00000217402 CLPSP04118 112 aa25.35■■□□□ 1.65
CHMP4B-201ENST00000217402 TRPC1P48995 793 aa25.35■■□□□ 1.65
CHMP4B-201ENST00000217402 CCT3P49368 545 aaKnown RBP25.35■■□□□ 1.65
CHMP4B-201ENST00000217402 GPR143P51810 404 aa25.35■■□□□ 1.65
CHMP4B-201ENST00000217402 TP53BP2Q13625 1128 aa25.35■■□□□ 1.65
CHMP4B-201ENST00000217402 KRT72Q14CN4 511 aa25.35■■□□□ 1.65
CHMP4B-201ENST00000217402 DCAF10Q5QP82 559 aa25.35■■□□□ 1.65
CHMP4B-201ENST00000217402 PLAG1Q6DJT9 500 aa25.35■■□□□ 1.65
CHMP4B-201ENST00000217402 RNF111Q6ZNA4 994 aa25.35■■□□□ 1.65
CHMP4B-201ENST00000217402 DHDDSQ86SQ9 333 aa25.35■■□□□ 1.65
CHMP4B-201ENST00000217402 VMP1Q96GC9 406 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms