RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 EXOSC8Q96B26 276 aaKnown RBP20.74■□□□□ 0.91
HOXC8-201ENST00000040584 ZNF501Q96CX3 271 aaPredicted RBP20.74■□□□□ 0.91
HOXC8-201ENST00000040584 FAM120BQ96EK7 910 aaKnown RBP20.74■□□□□ 0.91
HOXC8-201ENST00000040584 MAGED4Q96JG8 741 aa20.74■□□□□ 0.91
HOXC8-201ENST00000040584 MUS81Q96NY9 551 aa20.74■□□□□ 0.91
HOXC8-201ENST00000040584 POLR1BQ9H9Y6 1135 aa20.74■□□□□ 0.91
HOXC8-201ENST00000040584 TAS2R7Q9NYW3 318 aa20.74■□□□□ 0.91
HOXC8-201ENST00000040584 EHD3Q9NZN3 535 aa20.74■□□□□ 0.91
HOXC8-201ENST00000040584 BLOC1S6Q9UL45 172 aa20.74■□□□□ 0.91
HOXC8-201ENST00000040584 RDH16O75452 317 aa20.73■□□□□ 0.91
HOXC8-201ENST00000040584 CREG1O75629 220 aa20.73■□□□□ 0.91
HOXC8-201ENST00000040584 CPSF4O95639 269 aaKnown RBP20.73■□□□□ 0.91
HOXC8-201ENST00000040584 CLIC3O95833 236 aa20.73■□□□□ 0.91
HOXC8-201ENST00000040584 MT-ND1P03886 318 aa20.73■□□□□ 0.91
HOXC8-201ENST00000040584 GSNP06396 782 aa20.73■□□□□ 0.91
HOXC8-201ENST00000040584 MSL3P1P0C860 447 aa20.73■□□□□ 0.91
HOXC8-201ENST00000040584 LRRC74AQ0VAA2 488 aa20.73■□□□□ 0.91
HOXC8-201ENST00000040584 PMS2P3Q13401 168 aa20.73■□□□□ 0.91
HOXC8-201ENST00000040584 GTDC1Q4AE62 458 aa20.73■□□□□ 0.91
HOXC8-201ENST00000040584 GARNL3Q5VVW2 1013 aa20.73■□□□□ 0.91
HOXC8-201ENST00000040584 TBC1D20Q96BZ9 403 aa20.73■□□□□ 0.91
HOXC8-201ENST00000040584 PANX1Q96RD7 426 aa20.73■□□□□ 0.91
HOXC8-201ENST00000040584 PLGRKTQ9HBL7 147 aa20.73■□□□□ 0.91
HOXC8-201ENST00000040584 SERTAD3Q9UJW9 196 aa20.73■□□□□ 0.91
HOXC8-201ENST00000040584 ADAMTS20P59510 1910 aa20.73■□□□□ 0.91
HOXC8-201ENST00000040584 CPN2P22792 545 aa20.73■□□□□ 0.91
HOXC8-201ENST00000040584 ITGA1P56199 1179 aa20.73■□□□□ 0.91
HOXC8-201ENST00000040584 IL18R1Q13478 541 aa20.73■□□□□ 0.91
HOXC8-201ENST00000040584 FAM53BQ14153 422 aa20.73■□□□□ 0.91
HOXC8-201ENST00000040584 RAB39AQ14964 217 aa20.73■□□□□ 0.91
HOXC8-201ENST00000040584 HIPK1Q86Z02 1210 aa20.73■□□□□ 0.91
HOXC8-201ENST00000040584 METTL27Q8N6F8 245 aaPredicted RBP20.73■□□□□ 0.91
HOXC8-201ENST00000040584 TTC29Q8NA56 475 aaPredicted RBP20.73■□□□□ 0.91
HOXC8-201ENST00000040584 FBXO30Q8TB52 745 aa20.73■□□□□ 0.91
HOXC8-201ENST00000040584 REXO5Q96IC2 774 aaKnown RBP20.73■□□□□ 0.91
HOXC8-201ENST00000040584 CSF3RQ99062 836 aa20.73■□□□□ 0.91
HOXC8-201ENST00000040584 LYRM4Q9HD34 91 aa20.73■□□□□ 0.91
HOXC8-201ENST00000040584 ENAMQ9NRM1 1142 aa20.73■□□□□ 0.91
HOXC8-201ENST00000040584 FAM118AQ9NWS6 357 aa20.73■□□□□ 0.91
HOXC8-201ENST00000040584 PHF11Q9UIL8 331 aa20.73■□□□□ 0.91
HOXC8-201ENST00000040584 C3orf18Q9UK00 162 aa20.73■□□□□ 0.91
HOXC8-201ENST00000040584 UTS2RQ9UKP6 389 aa20.73■□□□□ 0.91
HOXC8-201ENST00000040584 C1orf226A1L170 272 aa20.72■□□□□ 0.91
HOXC8-201ENST00000040584 TRIM64BA6NI03 449 aa20.72■□□□□ 0.91
HOXC8-201ENST00000040584 DNAJB5O75953 348 aa20.72■□□□□ 0.91
HOXC8-201ENST00000040584 TMBIM6P55061 237 aa20.72■□□□□ 0.91
HOXC8-201ENST00000040584 GABARAPL2P60520 117 aa20.72■□□□□ 0.91
HOXC8-201ENST00000040584 GPR135Q8IZ08 494 aa20.72■□□□□ 0.91
HOXC8-201ENST00000040584 CA13Q8N1Q1 262 aa20.72■□□□□ 0.91
HOXC8-201ENST00000040584 CPPED1Q9BRF8 314 aaPredicted RBP20.72■□□□□ 0.91
HOXC8-201ENST00000040584 FANCEQ9HB96 536 aa20.72■□□□□ 0.91
HOXC8-201ENST00000040584 ORC6Q9Y5N6 252 aa20.72■□□□□ 0.91
HOXC8-201ENST00000040584 NR2F6P10588 404 aa20.71■□□□□ 0.91
HOXC8-201ENST00000040584 DDX5P17844 614 aaKnown RBP20.71■□□□□ 0.91
HOXC8-201ENST00000040584 BUD31P41223 144 aaPredicted RBP20.71■□□□□ 0.91
HOXC8-201ENST00000040584 PPP2R2BQ00005 443 aa20.71■□□□□ 0.91
HOXC8-201ENST00000040584 TNFRSF17Q02223 184 aa20.71■□□□□ 0.91
HOXC8-201ENST00000040584 NATD1Q8N6N6 113 aa20.71■□□□□ 0.91
HOXC8-201ENST00000040584 PHF12Q96QT6 1004 aa20.71■□□□□ 0.91
HOXC8-201ENST00000040584 OR6C1Q96RD1 312 aa20.71■□□□□ 0.91
HOXC8-201ENST00000040584 IKZF5Q9H5V7 419 aa20.71■□□□□ 0.91
HOXC8-201ENST00000040584 CUTCQ9NTM9 273 aa20.71■□□□□ 0.91
HOXC8-201ENST00000040584 CES1P1Q9UKY3 287 aa20.71■□□□□ 0.91
HOXC8-201ENST00000040584 NUP214P35658 2090 aaPredicted RBP20.71■□□□□ 0.91
HOXC8-201ENST00000040584 EVPLLA8MZ36 301 aa20.71■□□□□ 0.91
HOXC8-201ENST00000040584 ABCB7O75027 752 aa20.71■□□□□ 0.91
HOXC8-201ENST00000040584 PRKD3O94806 890 aa20.71■□□□□ 0.91
HOXC8-201ENST00000040584 C6orf47O95873 294 aa20.71■□□□□ 0.91
HOXC8-201ENST00000040584 GZMMP51124 257 aa20.71■□□□□ 0.91
HOXC8-201ENST00000040584 EMP3P54852 163 aa20.71■□□□□ 0.91
HOXC8-201ENST00000040584 ACY1Q03154 408 aa20.71■□□□□ 0.91
HOXC8-201ENST00000040584 ZFP36L1Q07352 338 aaKnown RBP20.71■□□□□ 0.91
HOXC8-201ENST00000040584 FAM214AQ32MH5 1076 aa20.71■□□□□ 0.91
HOXC8-201ENST00000040584 ENPP6Q6UWR7 440 aa20.71■□□□□ 0.91
HOXC8-201ENST00000040584 TTLL10Q6ZVT0 673 aa20.71■□□□□ 0.91
HOXC8-201ENST00000040584 GOT1L1Q8NHS2 421 aaPredicted RBP20.71■□□□□ 0.91
HOXC8-201ENST00000040584 FAM81AQ8TBF8 368 aa20.71■□□□□ 0.91
HOXC8-201ENST00000040584 PYURFQ96I23 114 aa20.71■□□□□ 0.91
HOXC8-201ENST00000040584 SLAMF7Q9NQ25 335 aa20.71■□□□□ 0.91
HOXC8-201ENST00000040584 MS4A12Q9NXJ0 267 aa20.71■□□□□ 0.91
HOXC8-201ENST00000040584 HCN3Q9P1Z3 774 aa20.71■□□□□ 0.91
HOXC8-201ENST00000040584 SAMD4AQ9UPU9 718 aaKnown RBP20.71■□□□□ 0.91
HOXC8-201ENST00000040584 CLCA2Q9UQC9 943 aa20.71■□□□□ 0.91
HOXC8-201ENST00000040584 A0A1W2PRB8 838 aa20.7■□□□□ 0.9
HOXC8-201ENST00000040584 PDPK1O15530 556 aa20.7■□□□□ 0.9
HOXC8-201ENST00000040584 CHST10O43529 356 aa20.7■□□□□ 0.9
HOXC8-201ENST00000040584 HYAL3O43820 417 aaPredicted RBP20.7■□□□□ 0.9
HOXC8-201ENST00000040584 ERAL1O75616 437 aaKnown RBP20.7■□□□□ 0.9
HOXC8-201ENST00000040584 NSA2O95478 260 aaKnown RBP20.7■□□□□ 0.9
HOXC8-201ENST00000040584 ABCB1P08183 1280 aaPredicted RBP20.7■□□□□ 0.9
HOXC8-201ENST00000040584 ATXN8OSP0DMR3 200 aa20.7■□□□□ 0.9
HOXC8-201ENST00000040584 ALAS2P22557 587 aa20.7■□□□□ 0.9
HOXC8-201ENST00000040584 EEF1B2P24534 225 aaKnown RBP20.7■□□□□ 0.9
HOXC8-201ENST00000040584 FRKP42685 505 aaPredicted RBP20.7■□□□□ 0.9
HOXC8-201ENST00000040584 PDX1P52945 283 aa20.7■□□□□ 0.9
HOXC8-201ENST00000040584 RAD23AP54725 363 aa20.7■□□□□ 0.9
HOXC8-201ENST00000040584 TPD52P55327 224 aaPredicted RBP20.7■□□□□ 0.9
HOXC8-201ENST00000040584 PCBP4P57723 403 aaKnown RBP20.7■□□□□ 0.9
HOXC8-201ENST00000040584 HBA1P69905 142 aa20.7■□□□□ 0.9
HOXC8-201ENST00000040584 SIM1P81133 766 aaPredicted RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms