RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 TRAPPC2P0DI81 140 aa9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 TRAPPC2BP0DI82 140 aa9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 UQCRC2P22695 453 aa9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 UBE3AQ05086 875 aa9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 TMEM115Q12893 351 aaPredicted RBP9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 PDE7AQ13946 482 aa9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 SNAPC1Q16533 368 aa9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 TATDN3Q17R31 274 aa9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 C12orf73Q69YU5 71 aa9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 DGLUCYQ7Z3D6 616 aa9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 PDZD3Q86UT5 571 aa9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 FBXL6Q8N531 539 aa9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 OR52P1PQ8NH57 321 aa9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 SLC7A13Q8TCU3 470 aa9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 OTUB1Q96FW1 271 aaPredicted RBP9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 IGSF21Q96ID5 467 aa9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 GFM1Q96RP9 751 aaKnown RBP9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 RSPO3Q9BXY4 272 aaPredicted RBP9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 ABCG4Q9H172 646 aa9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 MTG2Q9H4K7 406 aa9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 ANKRA2Q9H9E1 313 aa9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 MYNNQ9NPC7 610 aa9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 SEC14L3Q9UDX4 400 aa9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 C5orf42Q9H799 3197 aa9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 ARRDC5A6NEK1 342 aa9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 ANHXE9PGG2 379 aa9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 SMLR1H3BR10 107 aa9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 M0R3H8 397 aa9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 FAAHO00519 579 aa9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 KLHL18O94889 574 aa9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 RAB36O95755 333 aa9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 SRPRAP08240 638 aaKnown RBP9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 NR2F6P10588 404 aa9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 SLC2A2P11168 524 aaPredicted RBP9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 UQCRC1P31930 480 aa9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 RAB25P57735 213 aa9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 PCDH1Q08174 1060 aa9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 NLGN4YQ8NFZ3 816 aaPredicted RBP9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 BTN2A2Q8WVV5 523 aa9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 MRPS31Q92665 395 aaKnown RBP9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 PDXPQ96GD0 296 aa9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 TMEM169Q96HH4 297 aa9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 SCLYQ96I15 445 aa9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 GDF15Q99988 308 aa9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 LINC00597Q9H2U6 94 aa9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 NLKQ9UBE8 527 aa9.97□□□□□ -0.81
CX3CL1-201ENST00000006053 ZNF106Q9H2Y7 1883 aaKnown RBP9.96□□□□□ -0.81
CX3CL1-201ENST00000006053 SLC5A10A0PJK1 596 aa9.96□□□□□ -0.81
CX3CL1-201ENST00000006053 CASKO14936 926 aa9.96□□□□□ -0.81
CX3CL1-201ENST00000006053 ARHGEF9O43307 516 aa9.96□□□□□ -0.81
CX3CL1-201ENST00000006053 HOXA2O43364 376 aa9.96□□□□□ -0.81
CX3CL1-201ENST00000006053 SLC28A2O43868 658 aa9.96□□□□□ -0.81
CX3CL1-201ENST00000006053 OR7A10O76100 309 aa9.96□□□□□ -0.81
CX3CL1-201ENST00000006053 CYP2A6P11509 494 aaPredicted RBP9.96□□□□□ -0.81
CX3CL1-201ENST00000006053 VIPR1P32241 457 aa9.96□□□□□ -0.81
CX3CL1-201ENST00000006053 MAP2K3P46734 347 aa9.96□□□□□ -0.81
CX3CL1-201ENST00000006053 EFR3AQ14156 821 aa9.96□□□□□ -0.81
CX3CL1-201ENST00000006053 FLYWCH1Q4VC44 716 aa9.96□□□□□ -0.81
CX3CL1-201ENST00000006053 TMEM201Q5SNT2 666 aa9.96□□□□□ -0.81
CX3CL1-201ENST00000006053 ASTLQ6HA08 431 aaPredicted RBP9.96□□□□□ -0.81
CX3CL1-201ENST00000006053 ACSM5Q6NUN0 579 aa9.96□□□□□ -0.81
CX3CL1-201ENST00000006053 TRMT11Q7Z4G4 463 aaKnown RBP9.96□□□□□ -0.81
CX3CL1-201ENST00000006053 RASGRP3Q8IV61 690 aa9.96□□□□□ -0.81
CX3CL1-201ENST00000006053 MSLNLQ96KJ4 702 aa9.96□□□□□ -0.81
CX3CL1-201ENST00000006053 RIPOR3Q96MK2 946 aa9.96□□□□□ -0.81
CX3CL1-201ENST00000006053 IL17FQ96PD4 163 aa9.96□□□□□ -0.81
CX3CL1-201ENST00000006053 TEFMQ96QE5 360 aaKnown RBP9.96□□□□□ -0.81
CX3CL1-201ENST00000006053 EFCAB11Q9BUY7 163 aa9.96□□□□□ -0.81
CX3CL1-201ENST00000006053 KATNB1Q9BVA0 655 aa9.96□□□□□ -0.81
CX3CL1-201ENST00000006053 CPEB1Q9BZB8 566 aaKnown RBP9.96□□□□□ -0.81
CX3CL1-201ENST00000006053 RNF208Q9H0X6 261 aa9.96□□□□□ -0.81
CX3CL1-201ENST00000006053 IL21Q9HBE4 155 aa9.96□□□□□ -0.81
CX3CL1-201ENST00000006053 SLAMF7Q9NQ25 335 aa9.96□□□□□ -0.81
CX3CL1-201ENST00000006053 HS3ST2Q9Y278 367 aa9.96□□□□□ -0.81
CX3CL1-201ENST00000006053 GPR52Q9Y2T5 361 aa9.96□□□□□ -0.81
CX3CL1-201ENST00000006053 INSL5Q9Y5Q6 135 aa9.96□□□□□ -0.81
CX3CL1-201ENST00000006053 ANAPC1Q9H1A4 1944 aa9.96□□□□□ -0.81
CX3CL1-201ENST00000006053 CKAP5Q14008 2032 aa9.96□□□□□ -0.82
CX3CL1-201ENST00000006053 FAM240BA0A1B0GVZ2 78 aa9.96□□□□□ -0.82
CX3CL1-201ENST00000006053 LEFTY1O75610 366 aa9.96□□□□□ -0.82
CX3CL1-201ENST00000006053 C1orf105O95561 183 aa9.96□□□□□ -0.82
CX3CL1-201ENST00000006053 INHAP05111 366 aa9.96□□□□□ -0.82
CX3CL1-201ENST00000006053 ALPPP05187 535 aa9.96□□□□□ -0.82
CX3CL1-201ENST00000006053 INPP1P49441 399 aa9.96□□□□□ -0.82
CX3CL1-201ENST00000006053 FAPQ12884 760 aa9.96□□□□□ -0.82
CX3CL1-201ENST00000006053 IL18Q14116 193 aa9.96□□□□□ -0.82
CX3CL1-201ENST00000006053 GPR19Q15760 415 aa9.96□□□□□ -0.82
CX3CL1-201ENST00000006053 SYT14P1Q58G82 188 aa9.96□□□□□ -0.82
CX3CL1-201ENST00000006053 ARSIQ5FYB1 569 aa9.96□□□□□ -0.82
CX3CL1-201ENST00000006053 TPGS2Q68CL5 300 aa9.96□□□□□ -0.82
CX3CL1-201ENST00000006053 FAM92BQ6ZTR7 304 aa9.96□□□□□ -0.82
CX3CL1-201ENST00000006053 TMCO2Q7Z6W1 182 aaPredicted RBP9.96□□□□□ -0.82
CX3CL1-201ENST00000006053 Q8N402 240 aa9.96□□□□□ -0.82
CX3CL1-201ENST00000006053 SNAPC3Q92966 411 aa9.96□□□□□ -0.82
CX3CL1-201ENST00000006053 EXOSC8Q96B26 276 aaKnown RBP9.96□□□□□ -0.82
CX3CL1-201ENST00000006053 MTERF3Q96E29 417 aa9.96□□□□□ -0.82
CX3CL1-201ENST00000006053 TMEM245Q9H330 911 aa9.96□□□□□ -0.82
CX3CL1-201ENST00000006053 TMEM39AQ9NV64 488 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms