RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 ZNF768Q9H5H4 540 aaKnown RBP12.33□□□□□ -0.44
PHGDH-221ENST00000641573 SYNDIG1Q9H7V2 258 aa12.33□□□□□ -0.44
PHGDH-221ENST00000641573 GORASP2Q9H8Y8 452 aa12.33□□□□□ -0.44
PHGDH-221ENST00000641573 CLCA2Q9UQC9 943 aa12.33□□□□□ -0.44
PHGDH-221ENST00000641573 AK5Q9Y6K8 562 aa12.33□□□□□ -0.44
PHGDH-221ENST00000641573 A0A1W2PS29 197 aa12.32□□□□□ -0.44
PHGDH-221ENST00000641573 DHRS12A0PJE2 317 aa12.32□□□□□ -0.44
PHGDH-221ENST00000641573 CYR61O00622 381 aa12.32□□□□□ -0.44
PHGDH-221ENST00000641573 OR2B3O76000 313 aa12.32□□□□□ -0.44
PHGDH-221ENST00000641573 NSA2O95478 260 aaKnown RBP12.32□□□□□ -0.44
PHGDH-221ENST00000641573 GPIP06744 558 aa12.32□□□□□ -0.44
PHGDH-221ENST00000641573 NUDT7P0C024 238 aa12.32□□□□□ -0.44
PHGDH-221ENST00000641573 FOLR1P15328 257 aa12.32□□□□□ -0.44
PHGDH-221ENST00000641573 MPIP34949 423 aa12.32□□□□□ -0.44
PHGDH-221ENST00000641573 CRATP43155 626 aa12.32□□□□□ -0.44
PHGDH-221ENST00000641573 AVPR1BP47901 424 aa12.32□□□□□ -0.44
PHGDH-221ENST00000641573 CCT3P49368 545 aaKnown RBP12.32□□□□□ -0.44
PHGDH-221ENST00000641573 XKP51811 444 aa12.32□□□□□ -0.44
PHGDH-221ENST00000641573 CASP9P55211 416 aa12.32□□□□□ -0.44
PHGDH-221ENST00000641573 VAC14Q08AM6 782 aa12.32□□□□□ -0.44
PHGDH-221ENST00000641573 FADDQ13158 208 aa12.32□□□□□ -0.44
PHGDH-221ENST00000641573 ADRM1Q16186 407 aa12.32□□□□□ -0.44
PHGDH-221ENST00000641573 VMACQ2NL98 169 aa12.32□□□□□ -0.44
PHGDH-221ENST00000641573 MTX3Q5HYI7 312 aa12.32□□□□□ -0.44
PHGDH-221ENST00000641573 COX20Q5RI15 118 aa12.32□□□□□ -0.44
PHGDH-221ENST00000641573 GCNT6Q5T4J0 391 aa12.32□□□□□ -0.44
PHGDH-221ENST00000641573 SAXO2Q658L1 398 aa12.32□□□□□ -0.44
PHGDH-221ENST00000641573 C6orf120Q7Z4R8 191 aa12.32□□□□□ -0.44
PHGDH-221ENST00000641573 PTOV1Q86YD1 416 aa12.32□□□□□ -0.44
PHGDH-221ENST00000641573 SAMD14Q8IZD0 417 aaPredicted RBP12.32□□□□□ -0.44
PHGDH-221ENST00000641573 ADGRG5Q8IZF4 528 aa12.32□□□□□ -0.44
PHGDH-221ENST00000641573 SHISA5Q8N114 240 aa12.32□□□□□ -0.44
PHGDH-221ENST00000641573 TMEM52Q8NDY8 209 aa12.32□□□□□ -0.44
PHGDH-221ENST00000641573 OR4D9Q8NGE8 314 aa12.32□□□□□ -0.44
PHGDH-221ENST00000641573 OR1L3Q8NH93 324 aa12.32□□□□□ -0.44
PHGDH-221ENST00000641573 SUN3Q8TAQ9 357 aa12.32□□□□□ -0.44
PHGDH-221ENST00000641573 CANT1Q8WVQ1 401 aa12.32□□□□□ -0.44
PHGDH-221ENST00000641573 NCLNQ969V3 563 aa12.32□□□□□ -0.44
PHGDH-221ENST00000641573 NEURL3Q96EH8 262 aa12.32□□□□□ -0.44
PHGDH-221ENST00000641573 DPYSL5Q9BPU6 564 aa12.32□□□□□ -0.44
PHGDH-221ENST00000641573 DPH2Q9BQC3 489 aaPredicted RBP12.32□□□□□ -0.44
PHGDH-221ENST00000641573 ENAMQ9NRM1 1142 aa12.32□□□□□ -0.44
PHGDH-221ENST00000641573 SEMA3GQ9NS98 782 aa12.32□□□□□ -0.44
PHGDH-221ENST00000641573 CCM2LQ9NUG4 571 aaPredicted RBP12.32□□□□□ -0.44
PHGDH-221ENST00000641573 GPATCH2Q9NW75 528 aa12.32□□□□□ -0.44
PHGDH-221ENST00000641573 PDP2Q9P2J9 529 aa12.32□□□□□ -0.44
PHGDH-221ENST00000641573 MAP4K5Q9Y4K4 846 aa12.32□□□□□ -0.44
PHGDH-221ENST00000641573 AP4S1Q9Y587 144 aa12.32□□□□□ -0.44
PHGDH-221ENST00000641573 SPTA1P02549 2419 aa12.32□□□□□ -0.44
PHGDH-221ENST00000641573 FAM227AF5H4B4 570 aa12.31□□□□□ -0.44
PHGDH-221ENST00000641573 H3BMH7 237 aa12.31□□□□□ -0.44
PHGDH-221ENST00000641573 B4GALT2O60909 372 aa12.31□□□□□ -0.44
PHGDH-221ENST00000641573 TNFRSF21O75509 655 aa12.31□□□□□ -0.44
PHGDH-221ENST00000641573 CREG1O75629 220 aa12.31□□□□□ -0.44
PHGDH-221ENST00000641573 ANKRD34CP0C6C1 535 aa12.31□□□□□ -0.44
PHGDH-221ENST00000641573 UMPSP11172 480 aa12.31□□□□□ -0.44
PHGDH-221ENST00000641573 ETFAP13804 333 aa12.31□□□□□ -0.44
PHGDH-221ENST00000641573 IL10P22301 178 aa12.31□□□□□ -0.44
PHGDH-221ENST00000641573 PSMA4P25789 261 aaKnown RBP12.31□□□□□ -0.44
PHGDH-221ENST00000641573 PTGER1P34995 402 aa12.31□□□□□ -0.44
PHGDH-221ENST00000641573 GCKP35557 465 aa12.31□□□□□ -0.44
PHGDH-221ENST00000641573 PTDSS1P48651 473 aaKnown RBP12.31□□□□□ -0.44
PHGDH-221ENST00000641573 KCNC4Q03721 635 aa12.31□□□□□ -0.44
PHGDH-221ENST00000641573 C16orf72Q14CZ0 275 aa12.31□□□□□ -0.44
PHGDH-221ENST00000641573 FAM214AQ32MH5 1076 aa12.31□□□□□ -0.44
PHGDH-221ENST00000641573 IRAK1BP1Q5VVH5 260 aa12.31□□□□□ -0.44
PHGDH-221ENST00000641573 TMEM64Q6YI46 380 aa12.31□□□□□ -0.44
PHGDH-221ENST00000641573 OR4N5Q8IXE1 308 aa12.31□□□□□ -0.44
PHGDH-221ENST00000641573 PQLC1Q8N2U9 271 aa12.31□□□□□ -0.44
PHGDH-221ENST00000641573 LRRC25Q8N386 305 aaPredicted RBP12.31□□□□□ -0.44
PHGDH-221ENST00000641573 METTL27Q8N6F8 245 aaPredicted RBP12.31□□□□□ -0.44
PHGDH-221ENST00000641573 OR52E4Q8NGH9 312 aa12.31□□□□□ -0.44
PHGDH-221ENST00000641573 OR9A2Q8NGT5 310 aa12.31□□□□□ -0.44
PHGDH-221ENST00000641573 SFXN5Q8TD22 340 aa12.31□□□□□ -0.44
PHGDH-221ENST00000641573 NRG4Q8WWG1 115 aa12.31□□□□□ -0.44
PHGDH-221ENST00000641573 TANKQ92844 425 aa12.31□□□□□ -0.44
PHGDH-221ENST00000641573 CNDP2Q96KP4 475 aaKnown RBP12.31□□□□□ -0.44
PHGDH-221ENST00000641573 EFHD1Q9BUP0 239 aa12.31□□□□□ -0.44
PHGDH-221ENST00000641573 CLK4Q9HAZ1 481 aaKnown RBP12.31□□□□□ -0.44
PHGDH-221ENST00000641573 CUTCQ9NTM9 273 aa12.31□□□□□ -0.44
PHGDH-221ENST00000641573 HCN3Q9P1Z3 774 aa12.31□□□□□ -0.44
PHGDH-221ENST00000641573 FTSJ1Q9UET6 329 aa12.31□□□□□ -0.44
PHGDH-221ENST00000641573 ANAPC2Q9UJX6 822 aa12.31□□□□□ -0.44
PHGDH-221ENST00000641573 FAF1Q9UNN5 650 aaPredicted RBP12.31□□□□□ -0.44
PHGDH-221ENST00000641573 AURKCQ9UQB9 309 aa12.31□□□□□ -0.44
PHGDH-221ENST00000641573 PTPRQQ9UMZ3 2332 aa12.31□□□□□ -0.44
PHGDH-221ENST00000641573 CROCCQ5TZA2 2017 aa12.3□□□□□ -0.44
PHGDH-221ENST00000641573 IGHV5-10-1A0A0J9YXX1 117 aa12.3□□□□□ -0.44
PHGDH-221ENST00000641573 ERVH48-1M5A8F1 160 aa12.3□□□□□ -0.44
PHGDH-221ENST00000641573 TLX3O43711 291 aaPredicted RBP12.3□□□□□ -0.44
PHGDH-221ENST00000641573 FGF17O60258 216 aa12.3□□□□□ -0.44
PHGDH-221ENST00000641573 LDOC1O95751 146 aaPredicted RBP12.3□□□□□ -0.44
PHGDH-221ENST00000641573 GPR75O95800 540 aa12.3□□□□□ -0.44
PHGDH-221ENST00000641573 MSL3P1P0C860 447 aa12.3□□□□□ -0.44
PHGDH-221ENST00000641573 RNH1P13489 461 aaKnown RBP12.3□□□□□ -0.44
PHGDH-221ENST00000641573 CPMP14384 443 aa12.3□□□□□ -0.44
PHGDH-221ENST00000641573 PCGF2P35227 344 aa12.3□□□□□ -0.44
PHGDH-221ENST00000641573 PRIM2P49643 509 aa12.3□□□□□ -0.44
PHGDH-221ENST00000641573 ITGA1P56199 1179 aa12.3□□□□□ -0.44
PHGDH-221ENST00000641573 CXADRP78310 365 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms