RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 NAE1Q13564 534 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 PUM1Q14671 1186 aaKnown RBP eCLIP13.06□□□□□ -0.32
SCARB2-227ENST00000640957 TEAD4Q15561 434 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 RTP2Q5QGT7 225 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 FAM122CQ6P4D5 195 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 C17orf99Q6UX52 265 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 CD300LGQ6UXG3 332 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 RTN4RL1Q86UN2 441 aaPredicted RBP13.06□□□□□ -0.32
SCARB2-227ENST00000640957 NEIL3Q8TAT5 605 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 KAT2AQ92830 837 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 CMTM7Q96FZ5 175 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 RADILQ96JH8 1075 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 CXorf58Q96LI9 332 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 OR51B5Q9H339 312 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 EGLN3Q9H6Z9 239 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 C12orf10Q9HB07 376 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 FLVCR2Q9UPI3 526 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 SCML2Q9UQR0 700 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 PADI2Q9Y2J8 665 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 SDK1Q7Z5N4 2213 aa13.06□□□□□ -0.32
SCARB2-227ENST00000640957 ANKDD1BA6NHY2 528 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 WASH4PA8MWX3 477 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 SMAD6O43541 496 aaKnown RBP13.05□□□□□ -0.32
SCARB2-227ENST00000640957 KELP23276 732 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 PBLDP30039 288 aaPredicted RBP13.05□□□□□ -0.32
SCARB2-227ENST00000640957 RAB14P61106 215 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 POM121L1PQ3SYA9 428 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 RAET1GQ6H3X3 334 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 GPR155Q7Z3F1 870 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 PRSS42Q7Z5A4 293 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 KIF18BQ86Y91 864 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 STPG2Q8N412 459 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 OR2T35Q8NGX2 323 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 AP2M1Q96CW1 435 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 C11orf24Q96F05 449 aaPredicted RBP13.05□□□□□ -0.32
SCARB2-227ENST00000640957 METTL2AQ96IZ6 378 aaKnown RBP13.05□□□□□ -0.32
SCARB2-227ENST00000640957 PPP1R3EQ9H7J1 279 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 ZFYVE1Q9HBF4 777 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 SGK2Q9HBY8 427 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 CLCA2Q9UQC9 943 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 CDH10Q9Y6N8 788 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 DICER1Q9UPY3 1922 aaKnown RBP13.05□□□□□ -0.32
SCARB2-227ENST00000640957 ALPK2Q86TB3 2170 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 M0QZQ0 153 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 ADAM12O43184 909 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 AOAHP28039 575 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 ALDH9A1P49189 494 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 OR10A3P58181 314 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 TEKQ02763 1124 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 GINS1Q14691 196 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 ZNF628Q5EBL2 1059 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 ALKAL2Q6UX46 152 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 RSPO2Q6UXX9 243 aaPredicted RBP13.05□□□□□ -0.32
SCARB2-227ENST00000640957 RASSF6Q6ZTQ3 369 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 TRILQ7L0X0 811 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 FTMTQ8N4E7 242 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 SAMD12Q8N8I0 201 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 UXS1Q8NBZ7 420 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 MYLIPQ8WY64 445 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 ARSGQ96EG1 525 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 TMEM43Q9BTV4 400 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 RSPO3Q9BXY4 272 aaPredicted RBP13.05□□□□□ -0.32
SCARB2-227ENST00000640957 SPRTNQ9H040 489 aaPredicted RBP13.05□□□□□ -0.32
SCARB2-227ENST00000640957 ENAMQ9NRM1 1142 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 CXXC1Q9P0U4 656 aaPredicted RBP13.05□□□□□ -0.32
SCARB2-227ENST00000640957 M0R3H8 397 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 SLC30A4O14863 429 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 KDM4BO94953 1096 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 DNASE1P24855 282 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 RNF144AP50876 292 aaPredicted RBP13.05□□□□□ -0.32
SCARB2-227ENST00000640957 SFRP5Q5T4F7 317 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 GCNT6Q5T4J0 391 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 RNF180Q86T96 592 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 RBFAQ8N0V3 343 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 RBP7Q96R05 134 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 NRTNQ99748 197 aa13.05□□□□□ -0.32
SCARB2-227ENST00000640957 ELF5Q9UKW6 265 aaPredicted RBP13.05□□□□□ -0.32
SCARB2-227ENST00000640957 ZC3H12DA2A288 527 aaKnown RBP13.04□□□□□ -0.32
SCARB2-227ENST00000640957 PITPNM1O00562 1244 aa13.04□□□□□ -0.32
SCARB2-227ENST00000640957 FRS3O43559 492 aa13.04□□□□□ -0.32
SCARB2-227ENST00000640957 TBL1XO60907 577 aa13.04□□□□□ -0.32
SCARB2-227ENST00000640957 MT-ND4P03905 459 aa13.04□□□□□ -0.32
SCARB2-227ENST00000640957 IFNW1P05000 195 aa13.04□□□□□ -0.32
SCARB2-227ENST00000640957 ACADMP11310 421 aa13.04□□□□□ -0.32
SCARB2-227ENST00000640957 CKBP12277 381 aa13.04□□□□□ -0.32
SCARB2-227ENST00000640957 IL32P24001 234 aa13.04□□□□□ -0.32
SCARB2-227ENST00000640957 RPS13P62277 151 aaKnown RBP13.04□□□□□ -0.32
SCARB2-227ENST00000640957 SRSF11Q05519 484 aaKnown RBP13.04□□□□□ -0.32
SCARB2-227ENST00000640957 COX10Q12887 443 aa13.04□□□□□ -0.32
SCARB2-227ENST00000640957 NTRK2Q16620 822 aa13.04□□□□□ -0.32
SCARB2-227ENST00000640957 KLHL12Q53G59 568 aa13.04□□□□□ -0.32
SCARB2-227ENST00000640957 GPRC6AQ5T6X5 926 aa13.04□□□□□ -0.32
SCARB2-227ENST00000640957 SFRP4Q6FHJ7 346 aaPredicted RBP13.04□□□□□ -0.32
SCARB2-227ENST00000640957 WASH2PQ6VEQ5 465 aa13.04□□□□□ -0.32
SCARB2-227ENST00000640957 PRSS45Q7RTY3 260 aa13.04□□□□□ -0.32
SCARB2-227ENST00000640957 MS4A15Q8N5U1 240 aa13.04□□□□□ -0.32
SCARB2-227ENST00000640957 VPS37AQ8NEZ2 397 aa13.04□□□□□ -0.32
SCARB2-227ENST00000640957 YIPF4Q9BSR8 244 aa13.04□□□□□ -0.32
SCARB2-227ENST00000640957 C2orf49Q9BVC5 232 aaPredicted RBP13.04□□□□□ -0.32
SCARB2-227ENST00000640957 HEXA-AS1Q9H8Q6 139 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms