RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, human

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTTN-223	ENST00000640931	FNDC3B	Q53EP0	1204 aa	Known RBP	7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	FASTKD1	Q53R41	847 aa	Known RBP	7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	ARSI	Q5FYB1	569 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	NHLRC3	Q5JS37	347 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	SLC8B1	Q6J4K2	584 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	HAGHL	Q6PII5	290 aa	Predicted RBP	7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	PLET1	Q6UQ28	207 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	USP30	Q70CQ3	517 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	CEP97	Q8IW35	865 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	DNAJC22	Q8N4W6	341 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	C10orf53	Q8N6V4	93 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	ARRDC2	Q8TBH0	407 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	WFDC5	Q8TCV5	224 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	MAFIP	Q8WZ33	124 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	SLC38A4	Q969I6	547 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	ARMC5	Q96C12	935 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	R3HDM4	Q96D70	268 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	TCEAL4	Q96EI5	215 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	SLC38A3	Q99624	504 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	RBBP8	Q99708	897 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	KCNJ15	Q99712	375 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	CMSS1	Q9BQ75	279 aa	Known RBP	7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	TMEM175	Q9BSA9	504 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	KATNB1	Q9BVA0	655 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	PCDHAC1	Q9H158	963 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	TRPV4	Q9HBA0	871 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	C11orf16	Q9NQ32	467 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	DYRK4	Q9NR20	520 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	PNPO	Q9NVS9	261 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	METTL1	Q9UBP6	276 aa	Known RBP	7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	AASS	Q9UDR5	926 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	YIPF1	Q9Y548	306 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	IGLV3-10	A0A075B6K4	115 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931		A0A0U1RQV5	110 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	ARHGEF33	A8MVX0	844 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931		H3BNC9	293 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	SMLR1	H3BR10	107 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931		H7C4K7	107 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931		K7ERQ8	282 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	DSCR3	O14972	297 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	FABP7	O15540	132 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	EFS	O43281	561 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	VPS4B	O75351	444 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	SLC43A1	O75387	559 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	KRT33A	O76009	404 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	STC2	O76061	302 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	MPC2	O95563	127 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	HPR	P00739	348 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	GPI	P06744	558 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	FGF3	P11487	239 aa	Predicted RBP	7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	FOLR2	P14207	255 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	IL7R	P16871	459 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	RPS19	P39019	145 aa	Known RBP	7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	SLC1A2	P43004	574 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	ADPRH	P54922	357 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	TMEM35A	Q53FP2	167 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	DNLZ	Q5SXM8	178 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	PRAMEF13	Q5VWM6	474 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	TXNDC8	Q6A555	127 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	RPS27L	Q71UM5	84 aa	Known RBP	7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	SLC39A11	Q8N1S5	342 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	UMODL1-AS1	Q8N2C9	162 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	EFHB	Q8N7U6	833 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	ARL14EP	Q8N8R7	260 aa	Predicted RBP	7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	PLA2G15	Q8NCC3	412 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	FAM156A	Q8NDB6	213 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	OR10H5	Q8NGA6	315 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	OR2T4	Q8NH00	348 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	CEP76	Q8TAP6	659 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	TCTEX1D2	Q8WW35	142 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	BSCL2	Q96G97	398 aa	Predicted RBP	7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	ZNF845	Q96IR2	970 aa	Predicted RBP	7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	FAM83C	Q9BQN1	747 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	CRISPLD2	Q9H0B8	497 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	ZNF385D	Q9H6B1	395 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	TCF7L1	Q9HCS4	588 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	SPAG4	Q9NPE6	437 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	SLAMF7	Q9NQ25	335 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	IMP3	Q9NV31	184 aa	Known RBP	7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	ERVK13-1	Q9NX77	482 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	MARCH4	Q9P2E8	410 aa	Predicted RBP	7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	PHF11	Q9UIL8	331 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	CLEC4E	Q9ULY5	219 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	MMACHC	Q9Y4U1	282 aa		7.58	□□□□□ -1.2
RTTN-223	ENST00000640931	UNC80	Q8N2C7	3258 aa		7.57	□□□□□ -1.2
RTTN-223	ENST00000640931	CUL9	Q8IWT3	2517 aa		7.57	□□□□□ -1.2
RTTN-223	ENST00000640931		A0A096LPK6	155 aa		7.57	□□□□□ -1.2
RTTN-223	ENST00000640931	METTL21EP	A6NDL7	271 aa		7.57	□□□□□ -1.2
RTTN-223	ENST00000640931	KDM4E	B2RXH2	506 aa	Predicted RBP	7.57	□□□□□ -1.2
RTTN-223	ENST00000640931	WASH3P	C4AMC7	463 aa		7.57	□□□□□ -1.2
RTTN-223	ENST00000640931	GRID2	O43424	1007 aa		7.57	□□□□□ -1.2
RTTN-223	ENST00000640931	PLIN3	O60664	434 aa		7.57	□□□□□ -1.2
RTTN-223	ENST00000640931	RAMP2	O60895	175 aa		7.57	□□□□□ -1.2
RTTN-223	ENST00000640931	MPO	P05164	745 aa		7.57	□□□□□ -1.2
RTTN-223	ENST00000640931	CLTB	P09497	229 aa		7.57	□□□□□ -1.2
RTTN-223	ENST00000640931	SBK3	P0C264	359 aa		7.57	□□□□□ -1.2
RTTN-223	ENST00000640931	OR8G3P	P0DMU2	310 aa		7.57	□□□□□ -1.2
RTTN-223	ENST00000640931	ANXA7	P20073	488 aa	Known RBP	7.57	□□□□□ -1.2
RTTN-223	ENST00000640931	HOXD9	P28356	352 aa	Predicted RBP	7.57	□□□□□ -1.2
RTTN-223	ENST00000640931	PCGF2	P35227	344 aa		7.57	□□□□□ -1.2

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