RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 RIPPLY2Q5TAB7 128 aa16.97■□□□□ 0.31
CLN6-220ENST00000637450 TAGAPQ8N103 731 aa16.97■□□□□ 0.31
CLN6-220ENST00000637450 NEIL3Q8TAT5 605 aa16.97■□□□□ 0.31
CLN6-220ENST00000637450 TP53INP1Q96A56 240 aa16.97■□□□□ 0.31
CLN6-220ENST00000637450 NOL11Q9H8H0 719 aaKnown RBP16.97■□□□□ 0.31
CLN6-220ENST00000637450 CXorf21Q9HAI6 301 aa16.97■□□□□ 0.31
CLN6-220ENST00000637450 ZDHHC18Q9NUE0 388 aa16.97■□□□□ 0.31
CLN6-220ENST00000637450 CPSF2Q9P2I0 782 aaKnown RBP16.97■□□□□ 0.31
CLN6-220ENST00000637450 SETD2Q9BYW2 2564 aaPredicted RBP16.96■□□□□ 0.31
CLN6-220ENST00000637450 MTORP42345 2549 aa16.96■□□□□ 0.31
CLN6-220ENST00000637450 C2orf92A0A1B0GVN3 265 aa16.96■□□□□ 0.31
CLN6-220ENST00000637450 A0A1W2PS29 197 aa16.96■□□□□ 0.31
CLN6-220ENST00000637450 OR7A17O14581 309 aa16.96■□□□□ 0.31
CLN6-220ENST00000637450 TRIM3O75382 744 aaPredicted RBP16.96■□□□□ 0.31
CLN6-220ENST00000637450 LRATO95237 230 aa16.96■□□□□ 0.31
CLN6-220ENST00000637450 GBAP04062 536 aa16.96■□□□□ 0.31
CLN6-220ENST00000637450 SSTR4P31391 388 aa16.96■□□□□ 0.31
CLN6-220ENST00000637450 SLC7A5Q01650 507 aa16.96■□□□□ 0.31
CLN6-220ENST00000637450 UAP1Q16222 522 aaPredicted RBP16.96■□□□□ 0.31
CLN6-220ENST00000637450 TECRLQ5HYJ1 363 aa16.96■□□□□ 0.31
CLN6-220ENST00000637450 OR52E8Q6IFG1 317 aa16.96■□□□□ 0.31
CLN6-220ENST00000637450 SYT10Q6XYQ8 523 aa16.96■□□□□ 0.31
CLN6-220ENST00000637450 ULK2Q8IYT8 1036 aa16.96■□□□□ 0.31
CLN6-220ENST00000637450 PLD6Q8N2A8 252 aaKnown RBP16.96■□□□□ 0.31
CLN6-220ENST00000637450 MYRIPQ8NFW9 859 aa16.96■□□□□ 0.31
CLN6-220ENST00000637450 JSRP1Q96MG2 331 aaPredicted RBP16.96■□□□□ 0.31
CLN6-220ENST00000637450 CDK15Q96Q40 435 aa16.96■□□□□ 0.31
CLN6-220ENST00000637450 SERPINI1Q99574 410 aa16.96■□□□□ 0.31
CLN6-220ENST00000637450 DOHHQ9BU89 302 aa16.96■□□□□ 0.31
CLN6-220ENST00000637450 VPS11Q9H270 941 aa16.96■□□□□ 0.31
CLN6-220ENST00000637450 SLC6A15Q9H2J7 730 aa16.96■□□□□ 0.31
CLN6-220ENST00000637450 TP53I11O14683 189 aa16.95■□□□□ 0.3
CLN6-220ENST00000637450 SEMA3DO95025 777 aa16.95■□□□□ 0.3
CLN6-220ENST00000637450 PHBP35232 272 aa16.95■□□□□ 0.3
CLN6-220ENST00000637450 FUT7Q11130 342 aa16.95■□□□□ 0.3
CLN6-220ENST00000637450 MYBPHQ13203 477 aa16.95■□□□□ 0.3
CLN6-220ENST00000637450 TBCELQ5QJ74 424 aa16.95■□□□□ 0.3
CLN6-220ENST00000637450 TMEM198Q66K66 360 aa16.95■□□□□ 0.3
CLN6-220ENST00000637450 TMEM64Q6YI46 380 aa16.95■□□□□ 0.3
CLN6-220ENST00000637450 SEM1Q6ZVN7 128 aa16.95■□□□□ 0.3
CLN6-220ENST00000637450 TMEM200AQ86VY9 491 aa16.95■□□□□ 0.3
CLN6-220ENST00000637450 PTGR2Q8N8N7 351 aaPredicted RBP16.95■□□□□ 0.3
CLN6-220ENST00000637450 OR52B6Q8NGF0 335 aa16.95■□□□□ 0.3
CLN6-220ENST00000637450 DIO2Q92813 273 aa16.95■□□□□ 0.3
CLN6-220ENST00000637450 ATP6V1E2Q96A05 226 aa16.95■□□□□ 0.3
CLN6-220ENST00000637450 PHF21BQ96EK2 531 aa16.95■□□□□ 0.3
CLN6-220ENST00000637450 NTMT1Q9BV86 223 aa16.95■□□□□ 0.3
CLN6-220ENST00000637450 ACSS3Q9H6R3 686 aa16.95■□□□□ 0.3
CLN6-220ENST00000637450 ZNF358Q9NW07 568 aa16.95■□□□□ 0.3
CLN6-220ENST00000637450 B4GALT7Q9UBV7 327 aa16.95■□□□□ 0.3
CLN6-220ENST00000637450 L3MBTL1Q9Y468 752 aa16.95■□□□□ 0.3
CLN6-220ENST00000637450 NPFFR2Q9Y5X5 522 aa16.95■□□□□ 0.3
CLN6-220ENST00000637450 CAPN14A8MX76 684 aa16.94■□□□□ 0.3
CLN6-220ENST00000637450 RBP1P09455 135 aa16.94■□□□□ 0.3
CLN6-220ENST00000637450 CT62P0C5K7 136 aa16.94■□□□□ 0.3
CLN6-220ENST00000637450 PIK3R1P27986 724 aa16.94■□□□□ 0.3
CLN6-220ENST00000637450 TRPC1P48995 793 aa16.94■□□□□ 0.3
CLN6-220ENST00000637450 CCNG1P51959 295 aa16.94■□□□□ 0.3
CLN6-220ENST00000637450 FBXW4P57775 412 aa16.94■□□□□ 0.3
CLN6-220ENST00000637450 UBAP2Q5T6F2 1119 aaKnown RBP16.94■□□□□ 0.3
CLN6-220ENST00000637450 FRG2Q64ET8 278 aa16.94■□□□□ 0.3
CLN6-220ENST00000637450 ARSKQ6UWY0 536 aa16.94■□□□□ 0.3
CLN6-220ENST00000637450 GALNT12Q8IXK2 581 aa16.94■□□□□ 0.3
CLN6-220ENST00000637450 C17orf53Q8N3J3 647 aaPredicted RBP16.94■□□□□ 0.3
CLN6-220ENST00000637450 LIX1Q8N485 282 aa16.94■□□□□ 0.3
CLN6-220ENST00000637450 ZNF615Q8N8J6 731 aa16.94■□□□□ 0.3
CLN6-220ENST00000637450 OR4K14Q8NGD5 310 aa16.94■□□□□ 0.3
CLN6-220ENST00000637450 ADIPOR1Q96A54 375 aa16.94■□□□□ 0.3
CLN6-220ENST00000637450 FRG2BQ96QU4 278 aa16.94■□□□□ 0.3
CLN6-220ENST00000637450 SECISBP2Q96T21 854 aaKnown RBP16.94■□□□□ 0.3
CLN6-220ENST00000637450 LRRC1Q9BTT6 524 aa16.94■□□□□ 0.3
CLN6-220ENST00000637450 OR10A5Q9H207 317 aa16.94■□□□□ 0.3
CLN6-220ENST00000637450 TEX10Q9NXF1 929 aaPredicted RBP16.94■□□□□ 0.3
CLN6-220ENST00000637450 NINJ2Q9NZG7 142 aa16.94■□□□□ 0.3
CLN6-220ENST00000637450 ADAM29Q9UKF5 820 aa16.94■□□□□ 0.3
CLN6-220ENST00000637450 IKBKGQ9Y6K9 419 aa16.94■□□□□ 0.3
CLN6-220ENST00000637450 HSPB2A8KAH6 182 aa16.93■□□□□ 0.3
CLN6-220ENST00000637450 AHRRA9YTQ3 701 aa16.93■□□□□ 0.3
CLN6-220ENST00000637450 STX16-NPEPL1H3BU86 382 aa16.93■□□□□ 0.3
CLN6-220ENST00000637450 STX16O14662 325 aa16.93■□□□□ 0.3
CLN6-220ENST00000637450 SNX4O95219 450 aa16.93■□□□□ 0.3
CLN6-220ENST00000637450 ZWINTO95229 277 aa16.93■□□□□ 0.3
CLN6-220ENST00000637450 KLK1P06870 262 aa16.93■□□□□ 0.3
CLN6-220ENST00000637450 GDF1P27539 372 aa16.93■□□□□ 0.3
CLN6-220ENST00000637450 ARL1P40616 181 aaPredicted RBP16.93■□□□□ 0.3
CLN6-220ENST00000637450 MAGEA12P43365 314 aa16.93■□□□□ 0.3
CLN6-220ENST00000637450 XKP51811 444 aa16.93■□□□□ 0.3
CLN6-220ENST00000637450 DUSP8Q13202 625 aa16.93■□□□□ 0.3
CLN6-220ENST00000637450 RPS6KA2Q15349 733 aa16.93■□□□□ 0.3
CLN6-220ENST00000637450 HSPB2Q16082 182 aa16.93■□□□□ 0.3
CLN6-220ENST00000637450 C10orf62Q5T681 223 aaPredicted RBP16.93■□□□□ 0.3
CLN6-220ENST00000637450 HLA-DQA1Q5Y7H0 255 aa16.93■□□□□ 0.3
CLN6-220ENST00000637450 BICRALQ6AI39 1079 aa16.93■□□□□ 0.3
CLN6-220ENST00000637450 WDR53Q7Z5U6 358 aaPredicted RBP16.93■□□□□ 0.3
CLN6-220ENST00000637450 RELL1Q8IUW5 271 aa16.93■□□□□ 0.3
CLN6-220ENST00000637450 SPPL2AQ8TCT8 520 aa16.93■□□□□ 0.3
CLN6-220ENST00000637450 ISL2Q96A47 359 aa16.93■□□□□ 0.3
CLN6-220ENST00000637450 ZNF597Q96LX8 424 aa16.93■□□□□ 0.3
CLN6-220ENST00000637450 NSUN5Q96P11 429 aaKnown RBP16.93■□□□□ 0.3
CLN6-220ENST00000637450 ANGPTL4Q9BY76 406 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms