RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 LIX1Q8N485 282 aa16.53■□□□□ 0.24
PNKP-225ENST00000636214 OR4F6Q8NGB9 312 aa16.53■□□□□ 0.24
PNKP-225ENST00000636214 OR5M9Q8NGP3 310 aa16.53■□□□□ 0.24
PNKP-225ENST00000636214 OR10Q1Q8NGQ4 319 aa16.53■□□□□ 0.24
PNKP-225ENST00000636214 PAQR8Q8TEZ7 354 aa16.53■□□□□ 0.24
PNKP-225ENST00000636214 JSRP1Q96MG2 331 aaPredicted RBP16.53■□□□□ 0.24
PNKP-225ENST00000636214 DOHHQ9BU89 302 aa16.53■□□□□ 0.24
PNKP-225ENST00000636214 MRPL1Q9BYD6 325 aaKnown RBP16.53■□□□□ 0.24
PNKP-225ENST00000636214 FAM90A27PA6NNH2 459 aa16.52■□□□□ 0.24
PNKP-225ENST00000636214 AQP7O14520 342 aa16.52■□□□□ 0.24
PNKP-225ENST00000636214 SUSD5O60279 629 aa16.52■□□□□ 0.24
PNKP-225ENST00000636214 HCN1O60741 890 aa16.52■□□□□ 0.24
PNKP-225ENST00000636214 NADKO95544 446 aaPredicted RBP16.52■□□□□ 0.24
PNKP-225ENST00000636214 FBXO45P0C2W1 286 aa16.52■□□□□ 0.24
PNKP-225ENST00000636214 NT5EP21589 574 aa16.52■□□□□ 0.24
PNKP-225ENST00000636214 ACVR2AP27037 513 aa16.52■□□□□ 0.24
PNKP-225ENST00000636214 XKP51811 444 aa16.52■□□□□ 0.24
PNKP-225ENST00000636214 NR0B1P51843 470 aaKnown RBP16.52■□□□□ 0.24
PNKP-225ENST00000636214 PMPCAQ10713 525 aa16.52■□□□□ 0.24
PNKP-225ENST00000636214 TBCELQ5QJ74 424 aa16.52■□□□□ 0.24
PNKP-225ENST00000636214 WLSQ5T9L3 541 aa16.52■□□□□ 0.24
PNKP-225ENST00000636214 CEP112Q8N8E3 955 aa16.52■□□□□ 0.24
PNKP-225ENST00000636214 MYRIPQ8NFW9 859 aa16.52■□□□□ 0.24
PNKP-225ENST00000636214 KIF18AQ8NI77 898 aa16.52■□□□□ 0.24
PNKP-225ENST00000636214 MTBPQ96DY7 904 aa16.52■□□□□ 0.24
PNKP-225ENST00000636214 SPOCK3Q9BQ16 436 aa16.52■□□□□ 0.24
PNKP-225ENST00000636214 FAIM2Q9BWQ8 316 aa16.52■□□□□ 0.24
PNKP-225ENST00000636214 TRIM8Q9BZR9 551 aa16.52■□□□□ 0.24
PNKP-225ENST00000636214 CXorf21Q9HAI6 301 aa16.52■□□□□ 0.24
PNKP-225ENST00000636214 ZBTB26Q9HCK0 441 aa16.52■□□□□ 0.24
PNKP-225ENST00000636214 ZFP64Q9NPA5 681 aa16.52■□□□□ 0.24
PNKP-225ENST00000636214 KCNJ16Q9NPI9 418 aa16.52■□□□□ 0.24
PNKP-225ENST00000636214 PNPLA3Q9NST1 481 aa16.52■□□□□ 0.24
PNKP-225ENST00000636214 TEX10Q9NXF1 929 aaPredicted RBP16.52■□□□□ 0.24
PNKP-225ENST00000636214 ALKBH4Q9NXW9 302 aa16.52■□□□□ 0.24
PNKP-225ENST00000636214 PSME2Q9UL46 239 aa16.52■□□□□ 0.24
PNKP-225ENST00000636214 RNF6Q9Y252 685 aa16.52■□□□□ 0.24
PNKP-225ENST00000636214 LIPGQ9Y5X9 500 aa16.52■□□□□ 0.24
PNKP-225ENST00000636214 CCDC168Q8NDH2 2452 aa16.52■□□□□ 0.23
PNKP-225ENST00000636214 TRGV5A0A0B4J1U4 118 aa16.51■□□□□ 0.23
PNKP-225ENST00000636214 A0A1B0GVC2 190 aa16.51■□□□□ 0.23
PNKP-225ENST00000636214 WASHC1A8K0Z3 465 aa16.51■□□□□ 0.23
PNKP-225ENST00000636214 A8MT66 165 aa16.51■□□□□ 0.23
PNKP-225ENST00000636214 PGRMC2O15173 223 aa16.51■□□□□ 0.23
PNKP-225ENST00000636214 WDR1O75083 606 aa16.51■□□□□ 0.23
PNKP-225ENST00000636214 ABHD2P08910 425 aa16.51■□□□□ 0.23
PNKP-225ENST00000636214 ELAVL4P26378 380 aaKnown RBP16.51■□□□□ 0.23
PNKP-225ENST00000636214 SSTR4P31391 388 aa16.51■□□□□ 0.23
PNKP-225ENST00000636214 KIR3DL1P43629 444 aa16.51■□□□□ 0.23
PNKP-225ENST00000636214 FOXO1Q12778 655 aa16.51■□□□□ 0.23
PNKP-225ENST00000636214 RPS6KA2Q15349 733 aa16.51■□□□□ 0.23
PNKP-225ENST00000636214 HYAL4Q2M3T9 481 aa16.51■□□□□ 0.23
PNKP-225ENST00000636214 TMEM198Q66K66 360 aa16.51■□□□□ 0.23
PNKP-225ENST00000636214 B3GNT6Q6ZMB0 384 aa16.51■□□□□ 0.23
PNKP-225ENST00000636214 COMMD6Q7Z4G1 85 aa16.51■□□□□ 0.23
PNKP-225ENST00000636214 IFT20Q8IY31 132 aa16.51■□□□□ 0.23
PNKP-225ENST00000636214 METTL4Q8N3J2 472 aa16.51■□□□□ 0.23
PNKP-225ENST00000636214 MARVELD2Q8N4S9 558 aa16.51■□□□□ 0.23
PNKP-225ENST00000636214 OR10G3Q8NGC4 313 aa16.51■□□□□ 0.23
PNKP-225ENST00000636214 ZNF483Q8TF39 744 aaPredicted RBP16.51■□□□□ 0.23
PNKP-225ENST00000636214 DIO2Q92813 273 aa16.51■□□□□ 0.23
PNKP-225ENST00000636214 TP53INP1Q96A56 240 aa16.51■□□□□ 0.23
PNKP-225ENST00000636214 LURAP1Q96LR2 239 aa16.51■□□□□ 0.23
PNKP-225ENST00000636214 ZNF597Q96LX8 424 aa16.51■□□□□ 0.23
PNKP-225ENST00000636214 BRF2Q9HAW0 419 aa16.51■□□□□ 0.23
PNKP-225ENST00000636214 NFU1Q9UMS0 254 aa16.51■□□□□ 0.23
PNKP-225ENST00000636214 CFL2Q9Y281 166 aa16.51■□□□□ 0.23
PNKP-225ENST00000636214 C1orf226A1L170 272 aa16.5■□□□□ 0.23
PNKP-225ENST00000636214 FAM47E-STBD1D6RA91 191 aa16.5■□□□□ 0.23
PNKP-225ENST00000636214 ERAL1O75616 437 aaKnown RBP16.5■□□□□ 0.23
PNKP-225ENST00000636214 SUPT7LO94864 414 aa16.5■□□□□ 0.23
PNKP-225ENST00000636214 ESRRBO95718 433 aa16.5■□□□□ 0.23
PNKP-225ENST00000636214 PDYNP01213 254 aa16.5■□□□□ 0.23
PNKP-225ENST00000636214 KRT6AP02538 564 aa16.5■□□□□ 0.23
PNKP-225ENST00000636214 KRT6BP04259 564 aa16.5■□□□□ 0.23
PNKP-225ENST00000636214 CPMP14384 443 aa16.5■□□□□ 0.23
PNKP-225ENST00000636214 PORP16435 677 aaPredicted RBP16.5■□□□□ 0.23
PNKP-225ENST00000636214 ECHS1P30084 290 aa16.5■□□□□ 0.23
PNKP-225ENST00000636214 KRT6CP48668 564 aa16.5■□□□□ 0.23
PNKP-225ENST00000636214 MASP1P48740 699 aa16.5■□□□□ 0.23
PNKP-225ENST00000636214 CDH13P55290 713 aa16.5■□□□□ 0.23
PNKP-225ENST00000636214 NUP107P57740 925 aa16.5■□□□□ 0.23
PNKP-225ENST00000636214 RASA2Q15283 850 aa16.5■□□□□ 0.23
PNKP-225ENST00000636214 NTRK2Q16620 822 aa16.5■□□□□ 0.23
PNKP-225ENST00000636214 EMC4Q5J8M3 183 aa16.5■□□□□ 0.23
PNKP-225ENST00000636214 TRMT10CQ7L0Y3 403 aaKnown RBP16.5■□□□□ 0.23
PNKP-225ENST00000636214 LCA5Q86VQ0 697 aa16.5■□□□□ 0.23
PNKP-225ENST00000636214 CNPY4Q8N129 248 aa16.5■□□□□ 0.23
PNKP-225ENST00000636214 OR7G1Q8NGA0 311 aa16.5■□□□□ 0.23
PNKP-225ENST00000636214 LILRB4Q8NHJ6 448 aa16.5■□□□□ 0.23
PNKP-225ENST00000636214 TRPC4APQ8TEL6 797 aa16.5■□□□□ 0.23
PNKP-225ENST00000636214 BRINP2Q9C0B6 783 aa16.5■□□□□ 0.23
PNKP-225ENST00000636214 OR10A5Q9H207 317 aa16.5■□□□□ 0.23
PNKP-225ENST00000636214 ZNF703Q9H7S9 590 aaPredicted RBP16.5■□□□□ 0.23
PNKP-225ENST00000636214 SH2D2AQ9NP31 389 aa16.5■□□□□ 0.23
PNKP-225ENST00000636214 PFDN4Q9NQP4 134 aa16.5■□□□□ 0.23
PNKP-225ENST00000636214 QPCTLQ9NXS2 382 aa16.5■□□□□ 0.23
PNKP-225ENST00000636214 TRPS1Q9UHF7 1281 aa16.5■□□□□ 0.23
PNKP-225ENST00000636214 STK38LQ9Y2H1 464 aa16.5■□□□□ 0.23
PNKP-225ENST00000636214 HRH3Q9Y5N1 445 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms