RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 COMMD3-BMI1R4GMX3 469 aa6.78□□□□□ -1.32
BRCA1-230ENST00000634433 ATG2BQ96BY7 2078 aa6.78□□□□□ -1.32
BRCA1-230ENST00000634433 NUP214P35658 2090 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-230ENST00000634433 BDP1A6H8Y1 2624 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 A0A0A6YYD5 115 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 IGKV1-8A0A0C4DH67 115 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 URADA6NGE7 173 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 MYO1GB0I1T2 1018 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 C5orf58C9J3I9 102 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 ADAMDEC1O15204 470 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 ZW10O43264 779 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 PDE9AO76083 593 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 SEC24DO94855 1032 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-230ENST00000634433 IGLV3-19P01714 112 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 ITGAMP11215 1152 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 F3P13726 295 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 ALAS2P22557 587 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 NTSP30990 170 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 BCL6P41182 706 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 MVDP53602 400 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 PLA2G16P53816 162 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 ITGA1P56199 1179 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 PCBP4P57723 403 aaKnown RBP6.77□□□□□ -1.33
BRCA1-230ENST00000634433 DSTNP60981 165 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 RGS1Q08116 209 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 INAQ16352 499 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 SLC5A12Q1EHB4 618 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 NADK2Q4G0N4 442 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 IFI44LQ53G44 452 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 SAXO2Q658L1 398 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 PTCRAQ6ISU1 281 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-230ENST00000634433 BHLHB9Q6PI77 547 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 RD3Q7Z3Z2 195 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 UBE3DQ7Z6J8 389 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 RNF130Q86XS8 419 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 TRIM48Q8IWZ4 208 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 ALDH16A1Q8IZ83 802 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 ADGRF3Q8IZF5 1079 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 GALNT6Q8NCL4 622 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 SETD9Q8NE22 299 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 OR2L5Q8NG80 312 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 OR4E2Q8NGC2 313 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 ADAMTS16Q8TE57 1224 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 HMGB4Q8WW32 186 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 DIO2Q92813 273 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 TSACCQ96A04 125 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-230ENST00000634433 PDXPQ96GD0 296 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 AHCYL2Q96HN2 611 aaKnown RBP6.77□□□□□ -1.33
BRCA1-230ENST00000634433 EPYCQ99645 322 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 PHF7Q9BWX1 381 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-230ENST00000634433 GRIP2Q9C0E4 1043 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 EPS8L2Q9H6S3 715 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 SMURF2Q9HAU4 748 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 VCX3AQ9NNX9 186 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 SLC6A20Q9NP91 592 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 LYARQ9NX58 379 aaKnown RBP6.77□□□□□ -1.33
BRCA1-230ENST00000634433 C5AR2Q9P296 337 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 KIF17Q9P2E2 1029 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 UTS2RQ9UKP6 389 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 PSME2Q9UL46 239 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 SNX8Q9Y5X2 465 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 RANBP2P49792 3224 aaKnown RBP6.77□□□□□ -1.33
BRCA1-230ENST00000634433 LOC100130705A0A1B0GUX0 176 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 H3BQ06 376 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-230ENST00000634433 HAT1O14929 419 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 SLC16A6O15403 523 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 TMPRSS11DO60235 418 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 C9P02748 559 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 NUDT7P0C024 238 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 IGFBP5P24593 272 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 ALDH3B2P48448 385 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 CNPY1Q3B7I2 92 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 TOR1AIP1Q5JTV8 583 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 KIAA0895LQ68EN5 471 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 ZNF425Q6IV72 752 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 REEP3Q6NUK4 255 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 Q6ZSR6 202 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 VTCN1Q7Z7D3 282 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 DCP2Q8IU60 420 aaKnown RBP6.77□□□□□ -1.33
BRCA1-230ENST00000634433 ARMC8Q8IUR7 673 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 NFKBIDQ8NI38 313 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 PSMA8Q8TAA3 256 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 SPPL2AQ8TCT8 520 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 RASSF5Q8WWW0 418 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 GEMIN6Q8WXD5 167 aaKnown RBP6.77□□□□□ -1.33
BRCA1-230ENST00000634433 EXOSC8Q96B26 276 aaKnown RBP6.77□□□□□ -1.33
BRCA1-230ENST00000634433 MOAP1Q96BY2 351 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 MS4A6EQ96DS6 147 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 C7orf34Q96L11 122 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 MUS81Q96NY9 551 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 BBS4Q96RK4 519 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 NRTNQ99748 197 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 GSDMCQ9BYG8 508 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 CXorf36Q9H7Y0 433 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 PDE7BQ9NP56 450 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 A4GALTQ9NPC4 353 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 LHX9Q9NQ69 397 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 SLC2A4RGQ9NR83 387 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 GIMAP4Q9NUV9 329 aa6.77□□□□□ -1.33
BRCA1-230ENST00000634433 GPATCH2Q9NW75 528 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms