RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 EXOSC8Q96B26 276 aaKnown RBP6.74□□□□□ -1.33
NPLOC4-221ENST00000625705 ANKRD9Q96BM1 317 aaPredicted RBP6.74□□□□□ -1.33
NPLOC4-221ENST00000625705 ARL8AQ96BM9 186 aa6.74□□□□□ -1.33
NPLOC4-221ENST00000625705 PPWD1Q96BP3 646 aaKnown RBP6.74□□□□□ -1.33
NPLOC4-221ENST00000625705 TLCD1Q96CP7 247 aa6.74□□□□□ -1.33
NPLOC4-221ENST00000625705 TUBGCP3Q96CW5 907 aa6.74□□□□□ -1.33
NPLOC4-221ENST00000625705 C19orf60Q96EN9 201 aa6.74□□□□□ -1.33
NPLOC4-221ENST00000625705 IMMP1LQ96LU5 166 aa6.74□□□□□ -1.33
NPLOC4-221ENST00000625705 PPP3R2Q96LZ3 170 aa6.74□□□□□ -1.33
NPLOC4-221ENST00000625705 BBS4Q96RK4 519 aa6.74□□□□□ -1.33
NPLOC4-221ENST00000625705 GAL3ST4Q96RP7 486 aa6.74□□□□□ -1.33
NPLOC4-221ENST00000625705 WDR77Q9BQA1 342 aaPredicted RBP6.74□□□□□ -1.33
NPLOC4-221ENST00000625705 ZNF717Q9BY31 904 aaPredicted RBP6.74□□□□□ -1.33
NPLOC4-221ENST00000625705 BRINP2Q9C0B6 783 aa6.74□□□□□ -1.33
NPLOC4-221ENST00000625705 SAP130Q9H0E3 1048 aa6.74□□□□□ -1.33
NPLOC4-221ENST00000625705 ZNF552Q9H707 407 aaPredicted RBP6.74□□□□□ -1.33
NPLOC4-221ENST00000625705 TNFRSF12AQ9NP84 129 aa6.74□□□□□ -1.33
NPLOC4-221ENST00000625705 STMN3Q9NZ72 180 aa6.74□□□□□ -1.33
NPLOC4-221ENST00000625705 UTS2RQ9UKP6 389 aa6.74□□□□□ -1.33
NPLOC4-221ENST00000625705 B3GNT3Q9Y2A9 372 aa6.74□□□□□ -1.33
NPLOC4-221ENST00000625705 DLGAP4Q9Y2H0 992 aa6.74□□□□□ -1.33
NPLOC4-221ENST00000625705 RAP2CQ9Y3L5 183 aa6.74□□□□□ -1.33
NPLOC4-221ENST00000625705 PCDHA9Q9Y5H5 950 aa6.74□□□□□ -1.33
NPLOC4-221ENST00000625705 DNAJC15Q9Y5T4 150 aa6.74□□□□□ -1.33
NPLOC4-221ENST00000625705 TPRP12270 2363 aaKnown RBP6.74□□□□□ -1.33
NPLOC4-221ENST00000625705 FRYQ5TBA9 3013 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 GABRR3A8MPY1 467 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 B8ZZF3 427 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 PGRMC2O15173 223 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 ITM2AO43736 263 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 PEX11AO75192 247 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 DEAF1O75398 565 aaPredicted RBP6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 ZFAND5O76080 213 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 FGF4P08620 206 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 DHRS4L1P0CG22 281 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 KITP10721 976 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 DRD2P14416 443 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 PORP16435 677 aaPredicted RBP6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 CSNK2A2P19784 350 aaPredicted RBP6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 HPCAL1P37235 193 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 FEN1P39748 380 aaKnown RBP6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 RPL14P50914 215 aaKnown RBP6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 XKP51811 444 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 ERVK-8P63133 956 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 C2orf80Q0P641 193 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 BST1Q10588 318 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 MPP2Q14168 576 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 ZNF267Q14586 743 aaPredicted RBP6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 ACER2Q5QJU3 275 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 SLC6A19Q695T7 634 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 NOXRED1Q6NXP6 359 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 SLC48A1Q6P1K1 146 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 HSDL2Q6YN16 418 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 RNF111Q6ZNA4 994 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 SZRD1Q7Z422 152 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 RPS19BP1Q86WX3 136 aaKnown RBP6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 CRLF3Q8IUI8 442 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 GALNT12Q8IXK2 581 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 ST13P4Q8IZP2 240 aaPredicted RBP6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 MMP21Q8N119 569 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 BEST3Q8N1M1 668 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 LRRC25Q8N386 305 aaPredicted RBP6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 TMEM156Q8N614 296 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 HORMAD2Q8N7B1 307 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 ZNF781Q8N8C0 355 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 FNDC5Q8NAU1 212 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 FAM76AQ8TAV0 307 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 DNAJB14Q8TBM8 379 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 SLC2A12Q8TD20 617 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 LRRC8CQ8TDW0 803 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 DOK4Q8TEW6 326 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 C16orf78Q8WTQ4 265 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 GFM2Q969S9 779 aaKnown RBP6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 TMEM125Q96AQ2 219 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 PPCDCQ96CD2 204 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 C5orf34Q96MH7 638 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 TSSK3Q96PN8 268 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 LMF1Q96S06 567 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 CCT7Q99832 543 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 UTP23Q9BRU9 249 aaKnown RBP6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 CDCP1Q9H5V8 836 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 MANSC1Q9H8J5 431 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 ANKRD10Q9NXR5 420 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 VTI1BQ9UEU0 232 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 BCAP29Q9UHQ4 241 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 ZDHHC2Q9UIJ5 367 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 ERVK-11Q9UQG0 969 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 ERVK-19Q9WJR5 959 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 PTPRQQ9UMZ3 2332 aa6.73□□□□□ -1.33
NPLOC4-221ENST00000625705 TRAV17A0A0B4J275 112 aa6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 OR5H15A6NDH6 313 aa6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 LSM1O15116 133 aaKnown RBP6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 AKAP10O43572 662 aa6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 LRATO95237 230 aa6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 WDPCPO95876 746 aa6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 SLC35E2P0CK97 266 aa6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 CPMP14384 443 aa6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 NOS3P29474 1203 aa6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 ASMTP46597 345 aa6.72□□□□□ -1.33
NPLOC4-221ENST00000625705 ST13P50502 369 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms