RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 GARNL3Q5VVW2 1013 aa20.16■□□□□ 0.82
SPAST-204ENST00000621856 TBPL2Q6SJ96 375 aa20.16■□□□□ 0.82
SPAST-204ENST00000621856 SHISA5Q8N114 240 aa20.16■□□□□ 0.82
SPAST-204ENST00000621856 SVOPLQ8N434 492 aa20.16■□□□□ 0.82
SPAST-204ENST00000621856 OR4C6Q8NH72 309 aa20.16■□□□□ 0.82
SPAST-204ENST00000621856 SPPL2AQ8TCT8 520 aa20.16■□□□□ 0.82
SPAST-204ENST00000621856 MAGEE2Q8TD90 523 aaPredicted RBP20.16■□□□□ 0.82
SPAST-204ENST00000621856 OTUB1Q96FW1 271 aaPredicted RBP20.16■□□□□ 0.82
SPAST-204ENST00000621856 SPRTNQ9H040 489 aaPredicted RBP20.16■□□□□ 0.82
SPAST-204ENST00000621856 EQTNQ9NQ60 294 aa20.16■□□□□ 0.82
SPAST-204ENST00000621856 DDX18Q9NVP1 670 aaKnown RBP20.16■□□□□ 0.82
SPAST-204ENST00000621856 TMEM9Q9P0T7 183 aa20.16■□□□□ 0.82
SPAST-204ENST00000621856 HCN3Q9P1Z3 774 aa20.16■□□□□ 0.82
SPAST-204ENST00000621856 MN1Q10571 1320 aaPredicted RBP20.16■□□□□ 0.82
SPAST-204ENST00000621856 FGF17O60258 216 aa20.16■□□□□ 0.82
SPAST-204ENST00000621856 PDE9AO76083 593 aa20.16■□□□□ 0.82
SPAST-204ENST00000621856 GPR75O95800 540 aa20.16■□□□□ 0.82
SPAST-204ENST00000621856 NR2F1P10589 423 aa20.16■□□□□ 0.82
SPAST-204ENST00000621856 PPP2R1BP30154 601 aa20.16■□□□□ 0.82
SPAST-204ENST00000621856 CNR2P34972 360 aa20.16■□□□□ 0.82
SPAST-204ENST00000621856 PDK3Q15120 406 aa20.16■□□□□ 0.82
SPAST-204ENST00000621856 IFI44LQ53G44 452 aa20.16■□□□□ 0.82
SPAST-204ENST00000621856 OR2T5Q6IEZ7 315 aa20.16■□□□□ 0.82
SPAST-204ENST00000621856 OR2T29Q8NH02 315 aa20.16■□□□□ 0.82
SPAST-204ENST00000621856 OR5K1Q8NHB7 308 aa20.16■□□□□ 0.82
SPAST-204ENST00000621856 CNBD2Q96M20 576 aa20.16■□□□□ 0.82
SPAST-204ENST00000621856 ANKRA2Q9H9E1 313 aa20.16■□□□□ 0.82
SPAST-204ENST00000621856 ARID1BQ8NFD5 2236 aaPredicted RBP20.15■□□□□ 0.82
SPAST-204ENST00000621856 MYOCOSA0A1B0GUC4 107 aa20.15■□□□□ 0.82
SPAST-204ENST00000621856 CPED1A4D0V7 1026 aa20.15■□□□□ 0.82
SPAST-204ENST00000621856 EIF4E1BA6NMX2 242 aaKnown RBP20.15■□□□□ 0.82
SPAST-204ENST00000621856 A8MU76 341 aa20.15■□□□□ 0.82
SPAST-204ENST00000621856 FOXS1O43638 330 aa20.15■□□□□ 0.82
SPAST-204ENST00000621856 PGM3O95394 542 aa20.15■□□□□ 0.82
SPAST-204ENST00000621856 UBTFL6P0CB48 400 aaPredicted RBP20.15■□□□□ 0.82
SPAST-204ENST00000621856 RNH1P13489 461 aaKnown RBP20.15■□□□□ 0.82
SPAST-204ENST00000621856 MRPS35P82673 323 aaKnown RBP20.15■□□□□ 0.82
SPAST-204ENST00000621856 FAM53BQ14153 422 aa20.15■□□□□ 0.82
SPAST-204ENST00000621856 GRM7Q14831 915 aa20.15■□□□□ 0.82
SPAST-204ENST00000621856 RABEPKQ7Z6M1 372 aa20.15■□□□□ 0.82
SPAST-204ENST00000621856 METTL25Q8N6Q8 603 aa20.15■□□□□ 0.82
SPAST-204ENST00000621856 OR6C4Q8NGE1 309 aa20.15■□□□□ 0.82
SPAST-204ENST00000621856 CEP76Q8TAP6 659 aa20.15■□□□□ 0.82
SPAST-204ENST00000621856 C16orf58Q96GQ5 468 aa20.15■□□□□ 0.82
SPAST-204ENST00000621856 TMEM229AB2RXF0 380 aa20.14■□□□□ 0.81
SPAST-204ENST00000621856 SIGLEC6O43699 453 aa20.14■□□□□ 0.81
SPAST-204ENST00000621856 DIRAS1O95057 198 aa20.14■□□□□ 0.81
SPAST-204ENST00000621856 NSA2O95478 260 aaKnown RBP20.14■□□□□ 0.81
SPAST-204ENST00000621856 NT5EP21589 574 aa20.14■□□□□ 0.81
SPAST-204ENST00000621856 HOXD12P35452 270 aa20.14■□□□□ 0.81
SPAST-204ENST00000621856 AVPR1BP47901 424 aa20.14■□□□□ 0.81
SPAST-204ENST00000621856 PPP1R8Q12972 351 aaKnown RBP20.14■□□□□ 0.81
SPAST-204ENST00000621856 DAG1Q14118 895 aa20.14■□□□□ 0.81
SPAST-204ENST00000621856 SYPL1Q16563 259 aa20.14■□□□□ 0.81
SPAST-204ENST00000621856 PIWIL3Q7Z3Z3 882 aaKnown RBP20.14■□□□□ 0.81
SPAST-204ENST00000621856 MARVELD2Q8N4S9 558 aa20.14■□□□□ 0.81
SPAST-204ENST00000621856 SMYD1Q8NB12 490 aa20.14■□□□□ 0.81
SPAST-204ENST00000621856 OR7G2Q8NG99 324 aa20.14■□□□□ 0.81
SPAST-204ENST00000621856 MIPOL1Q8TD10 442 aa20.14■□□□□ 0.81
SPAST-204ENST00000621856 RBCK1Q9BYM8 510 aa20.14■□□□□ 0.81
SPAST-204ENST00000621856 U3KQV3 271 aa20.14■□□□□ 0.81
SPAST-204ENST00000621856 PATE3B3GLJ2 98 aa20.13■□□□□ 0.81
SPAST-204ENST00000621856 TMEM150CB9EJG8 249 aa20.13■□□□□ 0.81
SPAST-204ENST00000621856 ARSFP54793 590 aa20.13■□□□□ 0.81
SPAST-204ENST00000621856 INAVAQ3KP66 663 aa20.13■□□□□ 0.81
SPAST-204ENST00000621856 GUSBP11Q6P575 273 aa20.13■□□□□ 0.81
SPAST-204ENST00000621856 WDR74Q6RFH5 385 aaPredicted RBP20.13■□□□□ 0.81
SPAST-204ENST00000621856 METTL27Q8N6F8 245 aaPredicted RBP20.13■□□□□ 0.81
SPAST-204ENST00000621856 MMABQ96EY8 250 aaPredicted RBP20.13■□□□□ 0.81
SPAST-204ENST00000621856 PEX11GQ96HA9 241 aa20.13■□□□□ 0.81
SPAST-204ENST00000621856 C7orf34Q96L11 122 aa20.13■□□□□ 0.81
SPAST-204ENST00000621856 OR7D2Q96RA2 312 aa20.13■□□□□ 0.81
SPAST-204ENST00000621856 ZNF607Q96SK3 696 aa20.13■□□□□ 0.81
SPAST-204ENST00000621856 RUBCNLQ9H714 662 aa20.13■□□□□ 0.81
SPAST-204ENST00000621856 SMPD3Q9NY59 655 aaPredicted RBP20.13■□□□□ 0.81
SPAST-204ENST00000621856 PTGFRNQ9P2B2 879 aa20.13■□□□□ 0.81
SPAST-204ENST00000621856 MRPS33Q9Y291 106 aaKnown RBP20.13■□□□□ 0.81
SPAST-204ENST00000621856 PADI2Q9Y2J8 665 aa20.13■□□□□ 0.81
SPAST-204ENST00000621856 ZNF451Q9Y4E5 1061 aa20.13■□□□□ 0.81
SPAST-204ENST00000621856 MAGED1Q9Y5V3 778 aaPredicted RBP20.13■□□□□ 0.81
SPAST-204ENST00000621856 ZDBF2Q9HCK1 2354 aa20.13■□□□□ 0.81
SPAST-204ENST00000621856 FITM1A5D6W6 292 aa20.13■□□□□ 0.81
SPAST-204ENST00000621856 MAGEA13PA6NCF6 341 aa20.13■□□□□ 0.81
SPAST-204ENST00000621856 PLOD2O00469 737 aa20.13■□□□□ 0.81
SPAST-204ENST00000621856 OR2B3O76000 313 aa20.13■□□□□ 0.81
SPAST-204ENST00000621856 PNLIPP16233 465 aa20.13■□□□□ 0.81
SPAST-204ENST00000621856 TNFRSF1BP20333 461 aa20.13■□□□□ 0.81
SPAST-204ENST00000621856 DCTP40126 519 aa20.13■□□□□ 0.81
SPAST-204ENST00000621856 ALDH3A2P51648 485 aa20.13■□□□□ 0.81
SPAST-204ENST00000621856 ITGA1P56199 1179 aa20.13■□□□□ 0.81
SPAST-204ENST00000621856 TXNL4AP83876 142 aaKnown RBP20.13■□□□□ 0.81
SPAST-204ENST00000621856 MAT1AQ00266 395 aaKnown RBP20.13■□□□□ 0.81
SPAST-204ENST00000621856 GNA13Q14344 377 aa20.13■□□□□ 0.81
SPAST-204ENST00000621856 MAPK11Q15759 364 aa20.13■□□□□ 0.81
SPAST-204ENST00000621856 NHSL2Q5HYW2 709 aa20.13■□□□□ 0.81
SPAST-204ENST00000621856 FAM111BQ6SJ93 734 aa20.13■□□□□ 0.81
SPAST-204ENST00000621856 PRSS42Q7Z5A4 293 aa20.13■□□□□ 0.81
SPAST-204ENST00000621856 HIPK1Q86Z02 1210 aa20.13■□□□□ 0.81
SPAST-204ENST00000621856 ARMC8Q8IUR7 673 aa20.13■□□□□ 0.81
SPAST-204ENST00000621856 LGI4Q8N135 537 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms