RNA–Protein interactions for RNA: ENST00000621747.5

VEGFA-229, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-229ENST00000621747 PAQR8Q8TEZ7 354 aa23.26■■□□□ 1.31
VEGFA-229ENST00000621747 DMRTA2Q96SC8 542 aa23.26■■□□□ 1.31
VEGFA-229ENST00000621747 SH2D2AQ9NP31 389 aa23.26■■□□□ 1.31
VEGFA-229ENST00000621747 C2orf92A0A1B0GVN3 265 aa23.25■■□□□ 1.31
VEGFA-229ENST00000621747 A0A1W2PS29 197 aa23.25■■□□□ 1.31
VEGFA-229ENST00000621747 GOLGA6L10A6NI86 522 aa23.25■■□□□ 1.31
VEGFA-229ENST00000621747 CLDN14O95500 239 aa23.25■■□□□ 1.31
VEGFA-229ENST00000621747 CPMP14384 443 aa23.25■■□□□ 1.31
VEGFA-229ENST00000621747 PORP16435 677 aaPredicted RBP23.25■■□□□ 1.31
VEGFA-229ENST00000621747 NT5EP21589 574 aa23.25■■□□□ 1.31
VEGFA-229ENST00000621747 GRNP28799 593 aaKnown RBP23.25■■□□□ 1.31
VEGFA-229ENST00000621747 SSTR4P31391 388 aa23.25■■□□□ 1.31
VEGFA-229ENST00000621747 DEKP35659 375 aaKnown RBP23.25■■□□□ 1.31
VEGFA-229ENST00000621747 TRA2BP62995 288 aaKnown RBP23.25■■□□□ 1.31
VEGFA-229ENST00000621747 SLC48A1Q6P1K1 146 aa23.25■■□□□ 1.31
VEGFA-229ENST00000621747 TMEM251Q8N6I4 163 aa23.25■■□□□ 1.31
VEGFA-229ENST00000621747 C1orf52Q8N6N3 182 aaKnown RBP23.25■■□□□ 1.31
VEGFA-229ENST00000621747 LRRN4CLQ8ND94 238 aa23.25■■□□□ 1.31
VEGFA-229ENST00000621747 FAM13CQ8NE31 585 aa23.25■■□□□ 1.31
VEGFA-229ENST00000621747 METTL6Q8TCB7 284 aa23.25■■□□□ 1.31
VEGFA-229ENST00000621747 MZB1Q8WU39 189 aa23.25■■□□□ 1.31
VEGFA-229ENST00000621747 TP53INP1Q96A56 240 aa23.25■■□□□ 1.31
VEGFA-229ENST00000621747 L3HYPDHQ96EM0 354 aa23.25■■□□□ 1.31
VEGFA-229ENST00000621747 HBEGFQ99075 208 aa23.25■■□□□ 1.31
VEGFA-229ENST00000621747 FAIM2Q9BWQ8 316 aa23.25■■□□□ 1.31
VEGFA-229ENST00000621747 TP63Q9H3D4 680 aaPredicted RBP23.25■■□□□ 1.31
VEGFA-229ENST00000621747 CNIH4Q9P003 139 aa23.25■■□□□ 1.31
VEGFA-229ENST00000621747 PSME2Q9UL46 239 aa23.25■■□□□ 1.31
VEGFA-229ENST00000621747 CAPN14A8MX76 684 aa23.24■■□□□ 1.31
VEGFA-229ENST00000621747 ADAM10O14672 748 aa23.24■■□□□ 1.31
VEGFA-229ENST00000621747 ULK1O75385 1050 aa23.24■■□□□ 1.31
VEGFA-229ENST00000621747 CT62P0C5K7 136 aa23.24■■□□□ 1.31
VEGFA-229ENST00000621747 PIGAP37287 484 aa23.24■■□□□ 1.31
VEGFA-229ENST00000621747 PKNOX1P55347 436 aa23.24■■□□□ 1.31
VEGFA-229ENST00000621747 FUT7Q11130 342 aa23.24■■□□□ 1.31
VEGFA-229ENST00000621747 FOXO1Q12778 655 aa23.24■■□□□ 1.31
VEGFA-229ENST00000621747 LCP2Q13094 533 aa23.24■■□□□ 1.31
VEGFA-229ENST00000621747 HYAL4Q2M3T9 481 aa23.24■■□□□ 1.31
VEGFA-229ENST00000621747 TCHHL1Q5QJ38 904 aaPredicted RBP23.24■■□□□ 1.31
VEGFA-229ENST00000621747 NCCRP1Q6ZVX7 275 aaPredicted RBP23.24■■□□□ 1.31
VEGFA-229ENST00000621747 FBXW8Q8N3Y1 598 aa23.24■■□□□ 1.31
VEGFA-229ENST00000621747 OR7G1Q8NGA0 311 aa23.24■■□□□ 1.31
VEGFA-229ENST00000621747 UBLCP1Q8WVY7 318 aaPredicted RBP23.24■■□□□ 1.31
VEGFA-229ENST00000621747 CCDC126Q96EE4 140 aa23.24■■□□□ 1.31
VEGFA-229ENST00000621747 OR10A5Q9H207 317 aa23.24■■□□□ 1.31
VEGFA-229ENST00000621747 PPCSQ9HAB8 311 aa23.24■■□□□ 1.31
VEGFA-229ENST00000621747 TUBA8Q9NY65 449 aaPredicted RBP23.24■■□□□ 1.31
VEGFA-229ENST00000621747 CES1P1Q9UKY3 287 aa23.24■■□□□ 1.31
VEGFA-229ENST00000621747 SEC23IPQ9Y6Y8 1000 aaKnown RBP23.24■■□□□ 1.31
VEGFA-229ENST00000621747 CCDC151A5D8V7 595 aa23.23■■□□□ 1.31
VEGFA-229ENST00000621747 GLRA3O75311 464 aa23.23■■□□□ 1.31
VEGFA-229ENST00000621747 IGHG3P01860 377 aa23.23■■□□□ 1.31
VEGFA-229ENST00000621747 ENO1P06733 434 aaKnown RBP23.23■■□□□ 1.31
VEGFA-229ENST00000621747 MAGEA5P43359 124 aa23.23■■□□□ 1.31
VEGFA-229ENST00000621747 NR0B1P51843 470 aaKnown RBP23.23■■□□□ 1.31
VEGFA-229ENST00000621747 KCNJ2P63252 427 aa23.23■■□□□ 1.31
VEGFA-229ENST00000621747 NTRK2Q16620 822 aa23.23■■□□□ 1.31
VEGFA-229ENST00000621747 TMEM211Q6ICI0 200 aa23.23■■□□□ 1.31
VEGFA-229ENST00000621747 TICAM1Q8IUC6 712 aa23.23■■□□□ 1.31
VEGFA-229ENST00000621747 GBP7Q8N8V2 638 aaPredicted RBP23.23■■□□□ 1.31
VEGFA-229ENST00000621747 ZNF441Q8N8Z8 693 aa23.23■■□□□ 1.31
VEGFA-229ENST00000621747 OR10G3Q8NGC4 313 aa23.23■■□□□ 1.31
VEGFA-229ENST00000621747 TM4SF18Q96CE8 201 aa23.23■■□□□ 1.31
VEGFA-229ENST00000621747 COQ3Q9NZJ6 369 aa23.23■■□□□ 1.31
VEGFA-229ENST00000621747 BOKQ9UMX3 212 aaPredicted RBP23.23■■□□□ 1.31
VEGFA-229ENST00000621747 OR14I1A6ND48 311 aa23.22■■□□□ 1.31
VEGFA-229ENST00000621747 ERAL1O75616 437 aaKnown RBP23.22■■□□□ 1.31
VEGFA-229ENST00000621747 CSNK2A2P19784 350 aaPredicted RBP23.22■■□□□ 1.31
VEGFA-229ENST00000621747 NRG3P56975 720 aa23.22■■□□□ 1.31
VEGFA-229ENST00000621747 SLC10A1Q14973 349 aa23.22■■□□□ 1.31
VEGFA-229ENST00000621747 PRAMEF20Q5VT98 475 aa23.22■■□□□ 1.31
VEGFA-229ENST00000621747 VWA5B2Q8N398 1253 aa23.22■■□□□ 1.31
VEGFA-229ENST00000621747 ZNF615Q8N8J6 731 aa23.22■■□□□ 1.31
VEGFA-229ENST00000621747 CHTF18Q8WVB6 975 aa23.22■■□□□ 1.31
VEGFA-229ENST00000621747 MCM8Q9UJA3 840 aa23.22■■□□□ 1.31
VEGFA-229ENST00000621747 CHCHD2Q9Y6H1 151 aaPredicted RBP23.22■■□□□ 1.31
VEGFA-229ENST00000621747 A0A1W2PPM1 405 aa23.21■■□□□ 1.31
VEGFA-229ENST00000621747 NPIPA2E9PIF3 369 aa23.21■■□□□ 1.31
VEGFA-229ENST00000621747 NPIPA3F8WFD2 350 aa23.21■■□□□ 1.31
VEGFA-229ENST00000621747 TP53I11O14683 189 aa23.21■■□□□ 1.31
VEGFA-229ENST00000621747 BCKDKO14874 412 aa23.21■■□□□ 1.31
VEGFA-229ENST00000621747 ATP1B1P05026 303 aa23.21■■□□□ 1.31
VEGFA-229ENST00000621747 MYL2P10916 166 aa23.21■■□□□ 1.31
VEGFA-229ENST00000621747 ALDH9A1P49189 494 aa23.21■■□□□ 1.31
VEGFA-229ENST00000621747 TMED10P49755 219 aaKnown RBP23.21■■□□□ 1.31
VEGFA-229ENST00000621747 NAA20P61599 178 aa23.21■■□□□ 1.31
VEGFA-229ENST00000621747 FAM219BQ5XKK7 198 aa23.21■■□□□ 1.31
VEGFA-229ENST00000621747 KLHL29Q96CT2 875 aa23.21■■□□□ 1.31
VEGFA-229ENST00000621747 SMC6Q96SB8 1091 aa23.21■■□□□ 1.31
VEGFA-229ENST00000621747 BRINP2Q9C0B6 783 aa23.21■■□□□ 1.31
VEGFA-229ENST00000621747 LDAHQ9H6V9 325 aa23.21■■□□□ 1.31
VEGFA-229ENST00000621747 L2HGDHQ9H9P8 463 aa23.21■■□□□ 1.31
VEGFA-229ENST00000621747 ZFP64Q9NPA5 681 aa23.21■■□□□ 1.31
VEGFA-229ENST00000621747 CFL2Q9Y281 166 aa23.21■■□□□ 1.31
VEGFA-229ENST00000621747 ZNF780BQ9Y6R6 833 aa23.21■■□□□ 1.31
VEGFA-229ENST00000621747 NCOA6Q14686 2063 aaPredicted RBP23.21■■□□□ 1.31
VEGFA-229ENST00000621747 ATP6AP2A0A1C7CYW4 349 aa23.2■■□□□ 1.3
VEGFA-229ENST00000621747 ATP6AP2O75787 350 aa23.2■■□□□ 1.3
VEGFA-229ENST00000621747 ESRRBO95718 433 aa23.2■■□□□ 1.3
VEGFA-229ENST00000621747 SHBGP04278 402 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms