RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 YPEL5P62699 121 aa9.91□□□□□ -0.82
VPS11-208ENST00000621676 GXYLT1Q4G148 440 aa9.91□□□□□ -0.82
VPS11-208ENST00000621676 ANXA8L1Q5VT79 327 aa9.91□□□□□ -0.82
VPS11-208ENST00000621676 LCN8Q6JVE9 175 aa9.91□□□□□ -0.82
VPS11-208ENST00000621676 PAQR7Q86WK9 346 aa9.91□□□□□ -0.82
VPS11-208ENST00000621676 DHRSXQ8N5I4 330 aa9.91□□□□□ -0.82
VPS11-208ENST00000621676 SLC35G5Q96KT7 338 aa9.91□□□□□ -0.82
VPS11-208ENST00000621676 NELL2Q99435 816 aa9.91□□□□□ -0.82
VPS11-208ENST00000621676 DCUN1D5Q9BTE7 237 aa9.91□□□□□ -0.82
VPS11-208ENST00000621676 RSPO3Q9BXY4 272 aaPredicted RBP9.91□□□□□ -0.82
VPS11-208ENST00000621676 UGT2B28Q9BY64 529 aa9.91□□□□□ -0.82
VPS11-208ENST00000621676 PCBD2Q9H0N5 130 aa9.91□□□□□ -0.82
VPS11-208ENST00000621676 ANKHQ9HCJ1 492 aa9.91□□□□□ -0.82
VPS11-208ENST00000621676 GIMAP4Q9NUV9 329 aa9.91□□□□□ -0.82
VPS11-208ENST00000621676 MAT2BQ9NZL9 334 aa9.91□□□□□ -0.82
VPS11-208ENST00000621676 FOXE1O00358 373 aaPredicted RBP9.9□□□□□ -0.82
VPS11-208ENST00000621676 PEX12O00623 359 aa9.9□□□□□ -0.82
VPS11-208ENST00000621676 SIGLEC6O43699 453 aa9.9□□□□□ -0.82
VPS11-208ENST00000621676 OR10H3O60404 316 aa9.9□□□□□ -0.82
VPS11-208ENST00000621676 GABRA3P34903 492 aa9.9□□□□□ -0.82
VPS11-208ENST00000621676 BNC1Q01954 994 aa9.9□□□□□ -0.82
VPS11-208ENST00000621676 ARHGAP19Q14CB8 494 aa9.9□□□□□ -0.82
VPS11-208ENST00000621676 CDKL4Q5MAI5 379 aa9.9□□□□□ -0.82
VPS11-208ENST00000621676 OGFRL1Q5TC84 451 aaPredicted RBP9.9□□□□□ -0.82
VPS11-208ENST00000621676 ZAR1Q86SH2 424 aa9.9□□□□□ -0.82
VPS11-208ENST00000621676 IQCHQ86VS3 1027 aa9.9□□□□□ -0.82
VPS11-208ENST00000621676 GKN2Q86XP6 184 aa9.9□□□□□ -0.82
VPS11-208ENST00000621676 IQCF1Q8N6M8 205 aa9.9□□□□□ -0.82
VPS11-208ENST00000621676 MFSD2AQ8NA29 543 aa9.9□□□□□ -0.82
VPS11-208ENST00000621676 OR8J2Q8NGG1 315 aa9.9□□□□□ -0.82
VPS11-208ENST00000621676 TP53INP1Q96A56 240 aa9.9□□□□□ -0.82
VPS11-208ENST00000621676 TREX2Q9BQ50 279 aaPredicted RBP9.9□□□□□ -0.82
VPS11-208ENST00000621676 CHRDQ9H2X0 955 aa9.9□□□□□ -0.82
VPS11-208ENST00000621676 RMI1Q9H9A7 625 aa9.9□□□□□ -0.82
VPS11-208ENST00000621676 C11orf16Q9NQ32 467 aa9.9□□□□□ -0.82
VPS11-208ENST00000621676 DCAF13Q9NV06 445 aaKnown RBP9.9□□□□□ -0.82
VPS11-208ENST00000621676 SLC13A4Q9UKG4 626 aa9.9□□□□□ -0.82
VPS11-208ENST00000621676 HEBP2Q9Y5Z4 205 aa9.9□□□□□ -0.82
VPS11-208ENST00000621676 HS3ST3A1Q9Y663 406 aa9.9□□□□□ -0.82
VPS11-208ENST00000621676 CLCA3PQ9Y6N3 262 aa9.9□□□□□ -0.82
VPS11-208ENST00000621676 DOCK7Q96N67 2140 aa9.9□□□□□ -0.82
VPS11-208ENST00000621676 A6NCN8 305 aa9.9□□□□□ -0.82
VPS11-208ENST00000621676 PRAMEF25A6NGN4 478 aa9.9□□□□□ -0.82
VPS11-208ENST00000621676 K7ESF4 209 aa9.9□□□□□ -0.82
VPS11-208ENST00000621676 VILLO15195 856 aa9.9□□□□□ -0.82
VPS11-208ENST00000621676 HNRNPRO43390 633 aaKnown RBP9.9□□□□□ -0.82
VPS11-208ENST00000621676 FABP3P05413 133 aa9.9□□□□□ -0.82
VPS11-208ENST00000621676 PAX7P23759 505 aa9.9□□□□□ -0.82
VPS11-208ENST00000621676 MPIP34949 423 aa9.9□□□□□ -0.82
VPS11-208ENST00000621676 SUZ12Q15022 739 aaKnown RBP9.9□□□□□ -0.82
VPS11-208ENST00000621676 ATP6V1C2Q8NEY4 427 aa9.9□□□□□ -0.82
VPS11-208ENST00000621676 OR8J3Q8NGG0 315 aa9.9□□□□□ -0.82
VPS11-208ENST00000621676 CCDC74AQ96AQ1 378 aa9.9□□□□□ -0.82
VPS11-208ENST00000621676 EFHD2Q96C19 240 aaPredicted RBP9.9□□□□□ -0.82
VPS11-208ENST00000621676 FEVQ99581 238 aa9.9□□□□□ -0.82
VPS11-208ENST00000621676 TTTY10Q9BZA0 68 aa9.9□□□□□ -0.82
VPS11-208ENST00000621676 AGPAT4Q9NRZ5 378 aa9.9□□□□□ -0.82
VPS11-208ENST00000621676 ADPRHL2Q9NX46 363 aa9.9□□□□□ -0.82
VPS11-208ENST00000621676 DTX4Q9Y2E6 619 aa9.9□□□□□ -0.82
VPS11-208ENST00000621676 GXYLT2A0PJZ3 443 aa9.9□□□□□ -0.83
VPS11-208ENST00000621676 PMS2P1A4D2B8 440 aa9.9□□□□□ -0.83
VPS11-208ENST00000621676 TMX2-CTNND1H3BSU7 103 aa9.9□□□□□ -0.83
VPS11-208ENST00000621676 C8BP07358 591 aa9.9□□□□□ -0.83
VPS11-208ENST00000621676 POU3F3P20264 500 aaPredicted RBP9.9□□□□□ -0.83
VPS11-208ENST00000621676 CFHR1Q03591 330 aa9.9□□□□□ -0.83
VPS11-208ENST00000621676 ILF2Q12905 390 aaKnown RBP9.9□□□□□ -0.83
VPS11-208ENST00000621676 SF3A2Q15428 464 aaKnown RBP9.9□□□□□ -0.83
VPS11-208ENST00000621676 PERM1Q5SV97 790 aa9.9□□□□□ -0.83
VPS11-208ENST00000621676 KLHL35Q6PF15 583 aa9.9□□□□□ -0.83
VPS11-208ENST00000621676 SMARCD3Q6STE5 483 aa9.9□□□□□ -0.83
VPS11-208ENST00000621676 B3GNT8Q7Z7M8 397 aa9.9□□□□□ -0.83
VPS11-208ENST00000621676 C11orf24Q96F05 449 aaPredicted RBP9.9□□□□□ -0.83
VPS11-208ENST00000621676 RAD21L1Q9H4I0 556 aa9.9□□□□□ -0.83
VPS11-208ENST00000621676 REEP1Q9H902 201 aa9.9□□□□□ -0.83
VPS11-208ENST00000621676 THUMPD1Q9NXG2 353 aaKnown RBP9.9□□□□□ -0.83
VPS11-208ENST00000621676 ZNF282Q9UDV7 671 aaPredicted RBP9.9□□□□□ -0.83
VPS11-208ENST00000621676 GPR55Q9Y2T6 319 aaPredicted RBP9.9□□□□□ -0.83
VPS11-208ENST00000621676 OR10H1Q9Y4A9 318 aa9.9□□□□□ -0.83
VPS11-208ENST00000621676 ASB4Q9Y574 426 aa9.9□□□□□ -0.83
VPS11-208ENST00000621676 COL6A6A6NMZ7 2263 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 CXorf51AA0A1B0GTR3 108 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 TMEM247A6NEH6 219 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 CLEC3AO75596 197 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 ITIH1P19827 911 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 TLX1P31314 330 aaPredicted RBP9.89□□□□□ -0.83
VPS11-208ENST00000621676 ARSFP54793 590 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 MERTKQ12866 999 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 TRAP1Q12931 704 aaKnown RBP9.89□□□□□ -0.83
VPS11-208ENST00000621676 FCRLBQ6BAA4 426 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 ARHGAP22Q7Z5H3 698 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 CYP4Z1Q86W10 505 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 GPR135Q8IZ08 494 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 C19orf47Q8N9M1 422 aaKnown RBP9.89□□□□□ -0.83
VPS11-208ENST00000621676 OR4K14Q8NGD5 310 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 SLC22A18Q96BI1 424 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 ALOXE3Q9BYJ1 711 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 WASH6PQ9NQA3 447 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 MKL2Q9ULH7 1088 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 ERVK-19Q9WJR5 959 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 DNMT3AQ9Y6K1 912 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms