RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 CCDC116Q8IYX3 515 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 LRRC25Q8N386 305 aaPredicted RBP13.31□□□□□ -0.28
CBWD3-217ENST00000621474 REEP4Q9H6H4 257 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 MIEF1Q9NQG6 463 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 PFDN4Q9NQP4 134 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 NOP53Q9NZM5 478 aaKnown RBP13.31□□□□□ -0.28
CBWD3-217ENST00000621474 ZNF639Q9UID6 485 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 PSME2Q9UL46 239 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 ZNF451Q9Y4E5 1061 aa13.31□□□□□ -0.28
CBWD3-217ENST00000621474 GABRR3A8MPY1 467 aa13.3□□□□□ -0.28
CBWD3-217ENST00000621474 MYO1GB0I1T2 1018 aa13.3□□□□□ -0.28
CBWD3-217ENST00000621474 ANKRD28O15084 1053 aa13.3□□□□□ -0.28
CBWD3-217ENST00000621474 AKAP10O43572 662 aa13.3□□□□□ -0.28
CBWD3-217ENST00000621474 TBX19O60806 448 aa13.3□□□□□ -0.28
CBWD3-217ENST00000621474 ALPPP05187 535 aa13.3□□□□□ -0.28
CBWD3-217ENST00000621474 PRPS2P11908 318 aa13.3□□□□□ -0.28
CBWD3-217ENST00000621474 MAPK1P28482 360 aa13.3□□□□□ -0.28
CBWD3-217ENST00000621474 FRKP42685 505 aaPredicted RBP13.3□□□□□ -0.28
CBWD3-217ENST00000621474 ASMTP46597 345 aa13.3□□□□□ -0.28
CBWD3-217ENST00000621474 RNF4P78317 190 aa13.3□□□□□ -0.28
CBWD3-217ENST00000621474 MRPS35P82673 323 aaKnown RBP13.3□□□□□ -0.28
CBWD3-217ENST00000621474 ZNF267Q14586 743 aaPredicted RBP13.3□□□□□ -0.28
CBWD3-217ENST00000621474 ZNF628Q5EBL2 1059 aa13.3□□□□□ -0.28
CBWD3-217ENST00000621474 ACER2Q5QJU3 275 aa13.3□□□□□ -0.28
CBWD3-217ENST00000621474 IRAK1BP1Q5VVH5 260 aa13.3□□□□□ -0.28
CBWD3-217ENST00000621474 FAM111BQ6SJ93 734 aa13.3□□□□□ -0.28
CBWD3-217ENST00000621474 C16orf47Q6ZP98 133 aaPredicted RBP13.3□□□□□ -0.28
CBWD3-217ENST00000621474 BEST3Q8N1M1 668 aa13.3□□□□□ -0.28
CBWD3-217ENST00000621474 KRTCAP2Q8N6L1 136 aa13.3□□□□□ -0.28
CBWD3-217ENST00000621474 ADCY4Q8NFM4 1077 aa13.3□□□□□ -0.28
CBWD3-217ENST00000621474 THAP3Q8WTV1 239 aaPredicted RBP13.3□□□□□ -0.28
CBWD3-217ENST00000621474 OR52B2Q96RD2 323 aa13.3□□□□□ -0.28
CBWD3-217ENST00000621474 LMF1Q96S06 567 aa13.3□□□□□ -0.28
CBWD3-217ENST00000621474 CNPPD1Q9BV87 410 aa13.3□□□□□ -0.28
CBWD3-217ENST00000621474 LIN28AQ9H9Z2 209 aaKnown RBP13.3□□□□□ -0.28
CBWD3-217ENST00000621474 G3BP2Q9UN86 482 aaKnown RBP13.3□□□□□ -0.28
CBWD3-217ENST00000621474 USH1CQ9Y6N9 552 aa13.3□□□□□ -0.28
CBWD3-217ENST00000621474 ZNF780BQ9Y6R6 833 aa13.3□□□□□ -0.28
CBWD3-217ENST00000621474 EML6Q6ZMW3 1958 aa13.3□□□□□ -0.28
CBWD3-217ENST00000621474 EXPH5Q8NEV8 1989 aa13.3□□□□□ -0.28
CBWD3-217ENST00000621474 TRPC5OSA6NMA1 111 aa13.29□□□□□ -0.28
CBWD3-217ENST00000621474 SCAMP2O15127 329 aaKnown RBP13.29□□□□□ -0.28
CBWD3-217ENST00000621474 ZNF354AO60765 605 aaPredicted RBP13.29□□□□□ -0.28
CBWD3-217ENST00000621474 VPS4BO75351 444 aa13.29□□□□□ -0.28
CBWD3-217ENST00000621474 WDPCPO95876 746 aa13.29□□□□□ -0.28
CBWD3-217ENST00000621474 LBPP18428 481 aa13.29□□□□□ -0.28
CBWD3-217ENST00000621474 NT5EP21589 574 aa13.29□□□□□ -0.28
CBWD3-217ENST00000621474 MLF1P58340 268 aa13.29□□□□□ -0.28
CBWD3-217ENST00000621474 C21orf58P58505 322 aa13.29□□□□□ -0.28
CBWD3-217ENST00000621474 MAP4K2Q12851 820 aa13.29□□□□□ -0.28
CBWD3-217ENST00000621474 NFATC3Q12968 1075 aa13.29□□□□□ -0.28
CBWD3-217ENST00000621474 MAD2L1Q13257 205 aaPredicted RBP13.29□□□□□ -0.28
CBWD3-217ENST00000621474 NADK2Q4G0N4 442 aa13.29□□□□□ -0.28
CBWD3-217ENST00000621474 TRMT12Q53H54 448 aaKnown RBP13.29□□□□□ -0.28
CBWD3-217ENST00000621474 COLEC12Q5KU26 742 aa13.29□□□□□ -0.28
CBWD3-217ENST00000621474 ZNF468Q5VIY5 522 aaPredicted RBP13.29□□□□□ -0.28
CBWD3-217ENST00000621474 EPGNQ6UW88 154 aa13.29□□□□□ -0.28
CBWD3-217ENST00000621474 RPS19BP1Q86WX3 136 aaKnown RBP13.29□□□□□ -0.28
CBWD3-217ENST00000621474 PTRH1Q86Y79 214 aaKnown RBP13.29□□□□□ -0.28
CBWD3-217ENST00000621474 LGI4Q8N135 537 aa13.29□□□□□ -0.28
CBWD3-217ENST00000621474 SLC5A8Q8N695 610 aa13.29□□□□□ -0.28
CBWD3-217ENST00000621474 ZNF615Q8N8J6 731 aa13.29□□□□□ -0.28
CBWD3-217ENST00000621474 OR9A2Q8NGT5 310 aa13.29□□□□□ -0.28
CBWD3-217ENST00000621474 OR8K3Q8NH51 312 aa13.29□□□□□ -0.28
CBWD3-217ENST00000621474 ZNF675Q8TD23 568 aa13.29□□□□□ -0.28
CBWD3-217ENST00000621474 CIDECQ96AQ7 238 aaPredicted RBP13.29□□□□□ -0.28
CBWD3-217ENST00000621474 EBF4Q9BQW3 602 aa13.29□□□□□ -0.28
CBWD3-217ENST00000621474 GLIPR2Q9H4G4 154 aa13.29□□□□□ -0.28
CBWD3-217ENST00000621474 CDCP1Q9H5V8 836 aa13.29□□□□□ -0.28
CBWD3-217ENST00000621474 ANKRA2Q9H9E1 313 aa13.29□□□□□ -0.28
CBWD3-217ENST00000621474 PLA2G3Q9NZ20 509 aa13.29□□□□□ -0.28
CBWD3-217ENST00000621474 ATP6V1HQ9UI12 483 aa13.29□□□□□ -0.28
CBWD3-217ENST00000621474 DTX4Q9Y2E6 619 aa13.29□□□□□ -0.28
CBWD3-217ENST00000621474 KLHL41O60662 606 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 EDF1O60869 148 aaKnown RBP13.28□□□□□ -0.28
CBWD3-217ENST00000621474 CBX7O95931 251 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 F10P00742 488 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 PCSK2P16519 638 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 GUCY1A3Q02108 690 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 EBPQ15125 230 aaKnown RBP13.28□□□□□ -0.28
CBWD3-217ENST00000621474 MEP1AQ16819 746 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 HSDL2Q6YN16 418 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 Q6ZS92 163 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 SAMD14Q8IZD0 417 aaPredicted RBP13.28□□□□□ -0.28
CBWD3-217ENST00000621474 VWA5B2Q8N398 1253 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 ZNF843Q8N446 348 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 ARFGAP2Q8N6H7 521 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 Q8NA96 180 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 OR7A2PQ8NGA2 310 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 HAS2Q92819 552 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 MTERF3Q96E29 417 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 ART5Q96L15 291 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 ZNF354BQ96LW1 612 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 AMDHD1Q96NU7 426 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 DEFB126Q9BYW3 111 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 BRINP2Q9C0B6 783 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 RNF32Q9H0A6 362 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 STMN3Q9NZ72 180 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 MYOTQ9UBF9 498 aa13.28□□□□□ -0.28
CBWD3-217ENST00000621474 COPS7AQ9UBW8 275 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms