RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 SLC26A5P58743 744 aa12.71□□□□□ -0.37
NEK3-210ENST00000620675 HSPB3Q12988 150 aa12.71□□□□□ -0.37
NEK3-210ENST00000620675 ZNF267Q14586 743 aaPredicted RBP12.71□□□□□ -0.37
NEK3-210ENST00000620675 EXOSC7Q15024 291 aaKnown RBP12.71□□□□□ -0.37
NEK3-210ENST00000620675 APCDD1LQ8NCL9 501 aa12.71□□□□□ -0.37
NEK3-210ENST00000620675 SLC2A12Q8TD20 617 aa12.71□□□□□ -0.37
NEK3-210ENST00000620675 RIT1Q92963 219 aa12.71□□□□□ -0.37
NEK3-210ENST00000620675 MTERF3Q96E29 417 aa12.71□□□□□ -0.37
NEK3-210ENST00000620675 SENP5Q96HI0 755 aaPredicted RBP12.71□□□□□ -0.37
NEK3-210ENST00000620675 LPAR4Q99677 370 aa12.71□□□□□ -0.37
NEK3-210ENST00000620675 DUSP26Q9BV47 211 aa12.71□□□□□ -0.37
NEK3-210ENST00000620675 CNPPD1Q9BV87 410 aa12.71□□□□□ -0.37
NEK3-210ENST00000620675 TRIM4Q9C037 500 aa12.71□□□□□ -0.37
NEK3-210ENST00000620675 SAR1AQ9NR31 198 aa12.71□□□□□ -0.37
NEK3-210ENST00000620675 C19orf25Q9UFG5 118 aaPredicted RBP12.71□□□□□ -0.37
NEK3-210ENST00000620675 ERVK-19Q9WJR5 959 aa12.71□□□□□ -0.37
NEK3-210ENST00000620675 ENTPD4Q9Y227 616 aa12.71□□□□□ -0.37
NEK3-210ENST00000620675 ATP1B1P05026 303 aa12.71□□□□□ -0.38
NEK3-210ENST00000620675 CYC1P08574 325 aa12.71□□□□□ -0.38
NEK3-210ENST00000620675 PCSK2P16519 638 aa12.71□□□□□ -0.38
NEK3-210ENST00000620675 FRKP42685 505 aaPredicted RBP12.71□□□□□ -0.38
NEK3-210ENST00000620675 BTBD16Q32M84 506 aa12.71□□□□□ -0.38
NEK3-210ENST00000620675 CRTC2Q53ET0 693 aaPredicted RBP12.71□□□□□ -0.38
NEK3-210ENST00000620675 AGKQ53H12 422 aa12.71□□□□□ -0.38
NEK3-210ENST00000620675 C16orf47Q6ZP98 133 aaPredicted RBP12.71□□□□□ -0.38
NEK3-210ENST00000620675 GK5Q6ZS86 529 aa12.71□□□□□ -0.38
NEK3-210ENST00000620675 CLEC4FQ8N1N0 589 aa12.71□□□□□ -0.38
NEK3-210ENST00000620675 OR7G2Q8NG99 324 aa12.71□□□□□ -0.38
NEK3-210ENST00000620675 ZNF721Q8TF20 911 aa12.71□□□□□ -0.38
NEK3-210ENST00000620675 NCLNQ969V3 563 aa12.71□□□□□ -0.38
NEK3-210ENST00000620675 TESCQ96BS2 214 aa12.71□□□□□ -0.38
NEK3-210ENST00000620675 NUDT9Q9BW91 350 aa12.71□□□□□ -0.38
NEK3-210ENST00000620675 NSRP1Q9H0G5 558 aaKnown RBP12.71□□□□□ -0.38
NEK3-210ENST00000620675 LIN28AQ9H9Z2 209 aaKnown RBP12.71□□□□□ -0.38
NEK3-210ENST00000620675 SLC52A3Q9NQ40 469 aa12.71□□□□□ -0.38
NEK3-210ENST00000620675 ZIM2Q9NZV7 527 aa12.71□□□□□ -0.38
NEK3-210ENST00000620675 POLHQ9Y253 713 aa12.71□□□□□ -0.38
NEK3-210ENST00000620675 KCNMB2Q9Y691 235 aa12.71□□□□□ -0.38
NEK3-210ENST00000620675 CLCA3PQ9Y6N3 262 aa12.71□□□□□ -0.38
NEK3-210ENST00000620675 NINQ8N4C6 2090 aa12.7□□□□□ -0.38
NEK3-210ENST00000620675 CHD6Q8TD26 2715 aa12.7□□□□□ -0.38
NEK3-210ENST00000620675 ASPDHA6ND91 283 aa12.7□□□□□ -0.38
NEK3-210ENST00000620675 A6NL46 340 aa12.7□□□□□ -0.38
NEK3-210ENST00000620675 PEX12O00623 359 aa12.7□□□□□ -0.38
NEK3-210ENST00000620675 MAN1A2O60476 641 aa12.7□□□□□ -0.38
NEK3-210ENST00000620675 C6orf47O95873 294 aa12.7□□□□□ -0.38
NEK3-210ENST00000620675 HPP00738 406 aa12.7□□□□□ -0.38
NEK3-210ENST00000620675 ITGAMP11215 1152 aa12.7□□□□□ -0.38
NEK3-210ENST00000620675 ST3GAL2Q16842 350 aa12.7□□□□□ -0.38
NEK3-210ENST00000620675 TIGD2Q4W5G0 525 aa12.7□□□□□ -0.38
NEK3-210ENST00000620675 ZNF628Q5EBL2 1059 aa12.7□□□□□ -0.38
NEK3-210ENST00000620675 TMEM107Q6UX40 140 aa12.7□□□□□ -0.38
NEK3-210ENST00000620675 R3HCC1LQ7Z5L2 792 aaKnown RBP12.7□□□□□ -0.38
NEK3-210ENST00000620675 CAMKMTQ7Z624 323 aa12.7□□□□□ -0.38
NEK3-210ENST00000620675 GALNT12Q8IXK2 581 aa12.7□□□□□ -0.38
NEK3-210ENST00000620675 ZSCAN1Q8NBB4 408 aa12.7□□□□□ -0.38
NEK3-210ENST00000620675 ZNF764Q96H86 408 aaPredicted RBP12.7□□□□□ -0.38
NEK3-210ENST00000620675 MAGED4Q96JG8 741 aa12.7□□□□□ -0.38
NEK3-210ENST00000620675 ING2Q9H160 280 aa12.7□□□□□ -0.38
NEK3-210ENST00000620675 SIRT3Q9NTG7 399 aaPredicted RBP12.7□□□□□ -0.38
NEK3-210ENST00000620675 DTX4Q9Y2E6 619 aa12.7□□□□□ -0.38
NEK3-210ENST00000620675 CBX7O95931 251 aa12.69□□□□□ -0.38
NEK3-210ENST00000620675 FAM107AO95990 144 aa12.69□□□□□ -0.38
NEK3-210ENST00000620675 IGKV3-11P04433 115 aa12.69□□□□□ -0.38
NEK3-210ENST00000620675 PGRP06401 933 aa12.69□□□□□ -0.38
NEK3-210ENST00000620675 ABCB1P08183 1280 aaPredicted RBP12.69□□□□□ -0.38
NEK3-210ENST00000620675 CAPN3P20807 821 aa12.69□□□□□ -0.38
NEK3-210ENST00000620675 MC3RP41968 323 aa12.69□□□□□ -0.38
NEK3-210ENST00000620675 CDKN2CP42773 168 aa12.69□□□□□ -0.38
NEK3-210ENST00000620675 KIR3DL1P43629 444 aa12.69□□□□□ -0.38
NEK3-210ENST00000620675 POLR2JP52435 117 aaKnown RBP12.69□□□□□ -0.38
NEK3-210ENST00000620675 HBA1P69905 142 aa12.69□□□□□ -0.38
NEK3-210ENST00000620675 SQLEQ14534 574 aa12.69□□□□□ -0.38
NEK3-210ENST00000620675 FCRLBQ6BAA4 426 aa12.69□□□□□ -0.38
NEK3-210ENST00000620675 MTDHQ86UE4 582 aaKnown RBP12.69□□□□□ -0.38
NEK3-210ENST00000620675 B3GNT7Q8NFL0 401 aa12.69□□□□□ -0.38
NEK3-210ENST00000620675 OR8J2Q8NGG1 315 aa12.69□□□□□ -0.38
NEK3-210ENST00000620675 THAP3Q8WTV1 239 aaPredicted RBP12.69□□□□□ -0.38
NEK3-210ENST00000620675 THAP4Q8WY91 577 aa12.69□□□□□ -0.38
NEK3-210ENST00000620675 EXTL1Q92935 676 aa12.69□□□□□ -0.38
NEK3-210ENST00000620675 NACC2Q96BF6 587 aa12.69□□□□□ -0.38
NEK3-210ENST00000620675 CTHRC1Q96CG8 243 aa12.69□□□□□ -0.38
NEK3-210ENST00000620675 INPP5KQ9BT40 448 aa12.69□□□□□ -0.38
NEK3-210ENST00000620675 TUBB6Q9BUF5 446 aa12.69□□□□□ -0.38
NEK3-210ENST00000620675 SLC6A13Q9NSD5 602 aa12.69□□□□□ -0.38
NEK3-210ENST00000620675 NR5A2O00482 541 aa12.69□□□□□ -0.38
NEK3-210ENST00000620675 FCHO1O14526 889 aa12.69□□□□□ -0.38
NEK3-210ENST00000620675 NTSP30990 170 aa12.69□□□□□ -0.38
NEK3-210ENST00000620675 MPIP34949 423 aa12.69□□□□□ -0.38
NEK3-210ENST00000620675 MRPL19P49406 292 aaKnown RBP12.69□□□□□ -0.38
NEK3-210ENST00000620675 ATP4BP51164 291 aa12.69□□□□□ -0.38
NEK3-210ENST00000620675 CLNS1AP54105 237 aaKnown RBP12.69□□□□□ -0.38
NEK3-210ENST00000620675 MANFP55145 182 aaKnown RBP12.69□□□□□ -0.38
NEK3-210ENST00000620675 STX1BP61266 288 aa12.69□□□□□ -0.38
NEK3-210ENST00000620675 COL28A1Q2UY09 1125 aa12.69□□□□□ -0.38
NEK3-210ENST00000620675 VPS26BQ4G0F5 336 aa12.69□□□□□ -0.38
NEK3-210ENST00000620675 FHL5Q5TD97 284 aa12.69□□□□□ -0.38
NEK3-210ENST00000620675 PLAG1Q6DJT9 500 aa12.69□□□□□ -0.38
NEK3-210ENST00000620675 CPSF7Q8N684 471 aaKnown RBP12.69□□□□□ -0.38
NEK3-210ENST00000620675 SIRT6Q8N6T7 355 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms