RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 PHOSPHO1Q8TCT1 267 aa10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 KLK6Q92876 244 aa10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 OR51J1Q9H342 316 aa10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 PDE4DIPQ5VU43 2346 aa10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 SCAMP2O15127 329 aaKnown RBP10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 JRKO75564 520 aa10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 HAPLN1P10915 354 aaPredicted RBP10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 GGT2P36268 569 aa10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 TLE2Q04725 743 aa10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 ZNF791Q3KP31 576 aaPredicted RBP10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 RANBP10Q6VN20 620 aa10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 Q6ZVL8 140 aa10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 KREMEN2Q8NCW0 462 aa10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 DBF4BQ8NFT6 615 aa10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 TBC1D15Q8TC07 691 aa10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 PTERQ96BW5 349 aa10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 DHRS1Q96LJ7 313 aa10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 SLC38A3Q99624 504 aa10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 RETREG1Q9H6L5 497 aa10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 NT5DC2Q9H857 520 aa10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 POT1Q9NUX5 634 aa10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 IL37Q9NZH6 218 aa10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 EMCNQ9ULC0 261 aa10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 A0A0G2JLL6 359 aaPredicted RBP10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 A0A1W2PQ09 198 aa10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 C7orf72A4D263 438 aa10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 TUBG1P23258 451 aa10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 MAGEA11P43364 429 aa10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 ACTBP60709 375 aa10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 ACTG1P63261 375 aa10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 TMEM115Q12893 351 aaPredicted RBP10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 VEZF1Q14119 521 aa10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 UGT3A2Q3SY77 523 aa10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 CDNFQ49AH0 187 aa10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 RNASE10Q5GAN6 216 aaKnown RBP10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 LARP4Q71RC2 724 aaKnown RBP eCLIP10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 PRRT2Q7Z6L0 340 aaPredicted RBP10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 PARP16Q8N5Y8 322 aa10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 TCTEX1D2Q8WW35 142 aa10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 RBP7Q96R05 134 aa10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 ZNF649Q9BS31 505 aa10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 RBCK1Q9BYM8 510 aa10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 NAA50Q9GZZ1 169 aaKnown RBP10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 GORASP2Q9H8Y8 452 aa10.19□□□□□ -0.78
CLTCL1-209ENST00000617103 CDK1P06493 297 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 FHP07954 510 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 S100PP25815 95 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 ACRV1P26436 265 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 RPL10P27635 214 aaKnown RBP10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 CPOXP36551 454 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 RGS6P49758 472 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 GPR17Q13304 367 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 GNMTQ14749 295 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 GPR19Q15760 415 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 BCL7AQ4VC05 210 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 RAB6CQ53S08 254 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 KRBOX4Q5JUW0 171 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 AGAP7PQ5VUJ5 663 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 TXNDC8Q6A555 127 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 RGMBQ6NW40 437 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 OR4K14Q8NGD5 310 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 TRMT10AQ8TBZ6 339 aaKnown RBP10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 PBDC1Q9BVG4 233 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 KATNBL1Q9H079 304 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 RAB6CQ9H0N0 254 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 BIN3Q9NQY0 253 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 A0A1W2PRU2 124 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 OR6C74A6NCV1 312 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 NAP1L6A6NFF2 107 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 CLDN24A6NM45 220 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 H7BY64 318 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 ARNTLO00327 626 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 ITGAMP11215 1152 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 POU6F2P78424 691 aaPredicted RBP10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 RING1Q06587 406 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 GRIN2CQ14957 1233 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 TBCEQ15813 527 aaPredicted RBP10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 NPWQ8N729 165 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 HS6ST2Q96MM7 605 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 PRAP1Q96NZ9 151 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 ORAI3Q9BRQ5 295 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 MROQ9BYG7 248 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 ACTL8Q9H568 366 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 SDHAF3Q9NRP4 125 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 VNN3Q9NY84 501 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 VAPAQ9P0L0 249 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 CACNG2Q9Y698 323 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 MYH2Q9UKX2 1941 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 ANHXE9PGG2 379 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 EMC8O43402 210 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 LAMP1P11279 417 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 AK4P27144 223 aaPredicted RBP10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 TNFSF8P32971 234 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 SELENOWP63302 87 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 CLDN10P78369 228 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 NKAPLQ5M9Q1 402 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 RAB11FIP2Q7L804 512 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 CMTM8Q8IZV2 173 aa10.18□□□□□ -0.78
CLTCL1-209ENST00000617103 ARL11Q969Q4 196 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms