RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 PLOD2O00469 737 aa13.73□□□□□ -0.21
CD48-203ENST00000613788 SOCS6O14544 535 aa13.73□□□□□ -0.21
CD48-203ENST00000613788 BCAS2O75934 225 aaPredicted RBP13.73□□□□□ -0.21
CD48-203ENST00000613788 ANP32DO95626 131 aa13.73□□□□□ -0.21
CD48-203ENST00000613788 ABCB1P08183 1280 aaPredicted RBP13.73□□□□□ -0.21
CD48-203ENST00000613788 IFI6P09912 130 aa13.73□□□□□ -0.21
CD48-203ENST00000613788 EIF2S3P41091 472 aaKnown RBP13.73□□□□□ -0.21
CD48-203ENST00000613788 PGDP52209 483 aa13.73□□□□□ -0.21
CD48-203ENST00000613788 HBA1P69905 142 aa13.73□□□□□ -0.21
CD48-203ENST00000613788 EEF1A2Q05639 463 aaKnown RBP13.73□□□□□ -0.21
CD48-203ENST00000613788 GABPB1Q06547 395 aaPredicted RBP13.73□□□□□ -0.21
CD48-203ENST00000613788 IL10RAQ13651 578 aa13.73□□□□□ -0.21
CD48-203ENST00000613788 LTB4RQ15722 352 aa13.73□□□□□ -0.21
CD48-203ENST00000613788 CRTC2Q53ET0 693 aaPredicted RBP13.73□□□□□ -0.21
CD48-203ENST00000613788 ZNF628Q5EBL2 1059 aa13.73□□□□□ -0.21
CD48-203ENST00000613788 C6orf10Q5SRN2 563 aa13.73□□□□□ -0.21
CD48-203ENST00000613788 PAPD4Q6PIY7 484 aaKnown RBP13.73□□□□□ -0.21
CD48-203ENST00000613788 SLC2A7Q6PXP3 512 aa13.73□□□□□ -0.21
CD48-203ENST00000613788 NDUFAF7Q7L592 441 aa13.73□□□□□ -0.21
CD48-203ENST00000613788 VWA5B2Q8N398 1253 aa13.73□□□□□ -0.21
CD48-203ENST00000613788 TRIML2Q8N7C3 387 aa13.73□□□□□ -0.21
CD48-203ENST00000613788 POU5F2Q8N7G0 328 aa13.73□□□□□ -0.21
CD48-203ENST00000613788 ZSCAN1Q8NBB4 408 aa13.73□□□□□ -0.21
CD48-203ENST00000613788 PCYOX1LQ8NBM8 494 aa13.73□□□□□ -0.21
CD48-203ENST00000613788 ADCY4Q8NFM4 1077 aa13.73□□□□□ -0.21
CD48-203ENST00000613788 OR11G2Q8NGC1 345 aa13.73□□□□□ -0.21
CD48-203ENST00000613788 GOT1L1Q8NHS2 421 aaPredicted RBP13.73□□□□□ -0.21
CD48-203ENST00000613788 PSMA8Q8TAA3 256 aa13.73□□□□□ -0.21
CD48-203ENST00000613788 GTF2H4Q92759 462 aa13.73□□□□□ -0.21
CD48-203ENST00000613788 ELP4Q96EB1 424 aa13.73□□□□□ -0.21
CD48-203ENST00000613788 TUBB6Q9BUF5 446 aa13.73□□□□□ -0.21
CD48-203ENST00000613788 C3orf14Q9HBI5 128 aa13.73□□□□□ -0.21
CD48-203ENST00000613788 SERHLQ9NQF3 203 aa13.73□□□□□ -0.21
CD48-203ENST00000613788 MAT2BQ9NZL9 334 aa13.73□□□□□ -0.21
CD48-203ENST00000613788 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.73□□□□□ -0.21
CD48-203ENST00000613788 PTGFRNQ9P2B2 879 aa13.73□□□□□ -0.21
CD48-203ENST00000613788 TAGLN3Q9UI15 199 aa13.73□□□□□ -0.21
CD48-203ENST00000613788 MAN2B2Q9Y2E5 1009 aa13.73□□□□□ -0.21
CD48-203ENST00000613788 SCN2AQ99250 2005 aa13.72□□□□□ -0.21
CD48-203ENST00000613788 A0A087WV62 115 aa13.72□□□□□ -0.21
CD48-203ENST00000613788 IGHV1-45A0A0A0MS14 117 aa13.72□□□□□ -0.21
CD48-203ENST00000613788 NSG1A0A0A6YYJ2 146 aa13.72□□□□□ -0.21
CD48-203ENST00000613788 IGHV3-20A0A0C4DH32 117 aa13.72□□□□□ -0.21
CD48-203ENST00000613788 ASPDHA6ND91 283 aa13.72□□□□□ -0.21
CD48-203ENST00000613788 SAGE2PA6NJ88 616 aa13.72□□□□□ -0.21
CD48-203ENST00000613788 CCT8L1PA6NM43 557 aa13.72□□□□□ -0.21
CD48-203ENST00000613788 ZNF891A8MT65 544 aaPredicted RBP13.72□□□□□ -0.21
CD48-203ENST00000613788 PLOD3O60568 738 aa13.72□□□□□ -0.21
CD48-203ENST00000613788 ERN1O75460 977 aaKnown RBP13.72□□□□□ -0.21
CD48-203ENST00000613788 KCNH1O95259 989 aa13.72□□□□□ -0.21
CD48-203ENST00000613788 CAPNS1P04632 268 aa13.72□□□□□ -0.21
CD48-203ENST00000613788 ICAM2P13598 275 aa13.72□□□□□ -0.21
CD48-203ENST00000613788 MNAT1P51948 309 aa13.72□□□□□ -0.21
CD48-203ENST00000613788 MGAT2Q10469 447 aa13.72□□□□□ -0.21
CD48-203ENST00000613788 ZNF267Q14586 743 aaPredicted RBP13.72□□□□□ -0.21
CD48-203ENST00000613788 PAGE3Q5JUK9 113 aa13.72□□□□□ -0.21
CD48-203ENST00000613788 FAM111BQ6SJ93 734 aa13.72□□□□□ -0.21
CD48-203ENST00000613788 UNQ6494/PRO21346Q6UXR6 183 aa13.72□□□□□ -0.21
CD48-203ENST00000613788 DGAT2L6Q6ZPD8 337 aa13.72□□□□□ -0.21
CD48-203ENST00000613788 ZNF621Q6ZSS3 439 aa13.72□□□□□ -0.21
CD48-203ENST00000613788 MRGPREQ86SM8 312 aa13.72□□□□□ -0.21
CD48-203ENST00000613788 DPP10Q8N608 796 aa13.72□□□□□ -0.21
CD48-203ENST00000613788 ADAMTS17Q8TE56 1095 aa13.72□□□□□ -0.21
CD48-203ENST00000613788 THAP4Q8WY91 577 aa13.72□□□□□ -0.21
CD48-203ENST00000613788 KAT2AQ92830 837 aa13.72□□□□□ -0.21
CD48-203ENST00000613788 CTHRC1Q96CG8 243 aa13.72□□□□□ -0.21
CD48-203ENST00000613788 SENP5Q96HI0 755 aaPredicted RBP13.72□□□□□ -0.21
CD48-203ENST00000613788 FBXL20Q96IG2 436 aa13.72□□□□□ -0.21
CD48-203ENST00000613788 WDR77Q9BQA1 342 aaPredicted RBP13.72□□□□□ -0.21
CD48-203ENST00000613788 CNPPD1Q9BV87 410 aa13.72□□□□□ -0.21
CD48-203ENST00000613788 EFCAB1Q9HAE3 211 aa13.72□□□□□ -0.21
CD48-203ENST00000613788 P4HTMQ9NXG6 502 aa13.72□□□□□ -0.21
CD48-203ENST00000613788 VPS4AQ9UN37 437 aa13.72□□□□□ -0.21
CD48-203ENST00000613788 SNX8Q9Y5X2 465 aa13.72□□□□□ -0.21
CD48-203ENST00000613788 CROCCQ5TZA2 2017 aa13.71□□□□□ -0.21
CD48-203ENST00000613788 A0A096LPI6 279 aa13.71□□□□□ -0.21
CD48-203ENST00000613788 FBP2O00757 339 aa13.71□□□□□ -0.21
CD48-203ENST00000613788 SEC24DO94855 1032 aaPredicted RBP13.71□□□□□ -0.21
CD48-203ENST00000613788 NPPAP01160 153 aa13.71□□□□□ -0.21
CD48-203ENST00000613788 CT62P0C5K7 136 aa13.71□□□□□ -0.21
CD48-203ENST00000613788 ZCCHC18P0CG32 403 aa13.71□□□□□ -0.21
CD48-203ENST00000613788 ESRRAP11474 423 aaPredicted RBP13.71□□□□□ -0.21
CD48-203ENST00000613788 COX6A1P12074 109 aa13.71□□□□□ -0.21
CD48-203ENST00000613788 PTGER1P34995 402 aa13.71□□□□□ -0.21
CD48-203ENST00000613788 MC3RP41968 323 aa13.71□□□□□ -0.21
CD48-203ENST00000613788 CDK9P50750 372 aaKnown RBP13.71□□□□□ -0.21
CD48-203ENST00000613788 MRPS35P82673 323 aaKnown RBP13.71□□□□□ -0.21
CD48-203ENST00000613788 PRR5P85299 388 aa13.71□□□□□ -0.21
CD48-203ENST00000613788 FUT7Q11130 342 aa13.71□□□□□ -0.21
CD48-203ENST00000613788 PCOLCEQ15113 449 aa13.71□□□□□ -0.21
CD48-203ENST00000613788 EXT1Q16394 746 aa13.71□□□□□ -0.21
CD48-203ENST00000613788 SPDYE7PQ495Y7 208 aa13.71□□□□□ -0.21
CD48-203ENST00000613788 TRMT12Q53H54 448 aaKnown RBP13.71□□□□□ -0.21
CD48-203ENST00000613788 BROXQ5VW32 411 aa13.71□□□□□ -0.21
CD48-203ENST00000613788 BHLHB9Q6PI77 547 aa13.71□□□□□ -0.21
CD48-203ENST00000613788 TMEM107Q6UX40 140 aa13.71□□□□□ -0.21
CD48-203ENST00000613788 TMEM64Q6YI46 380 aa13.71□□□□□ -0.21
CD48-203ENST00000613788 LRRC69Q6ZNQ3 347 aa13.71□□□□□ -0.21
CD48-203ENST00000613788 B3GNT7Q8NFL0 401 aa13.71□□□□□ -0.21
CD48-203ENST00000613788 OR7G1Q8NGA0 311 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms