RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 ACER2Q5QJU3 275 aa12.35□□□□□ -0.43
MDC1-209ENST00000613547 FAM180BQ6P0A1 224 aa12.35□□□□□ -0.43
MDC1-209ENST00000613547 RNF111Q6ZNA4 994 aa12.35□□□□□ -0.43
MDC1-209ENST00000613547 LINC00696Q6ZRV3 163 aa12.35□□□□□ -0.43
MDC1-209ENST00000613547 SLC29A4Q7RTT9 530 aa12.35□□□□□ -0.43
MDC1-209ENST00000613547 MAVSQ7Z434 540 aa12.35□□□□□ -0.43
MDC1-209ENST00000613547 RPS19BP1Q86WX3 136 aaKnown RBP12.35□□□□□ -0.43
MDC1-209ENST00000613547 CCDC116Q8IYX3 515 aa12.35□□□□□ -0.43
MDC1-209ENST00000613547 KIF2BQ8N4N8 673 aa12.35□□□□□ -0.43
MDC1-209ENST00000613547 ZADH2Q8N4Q0 377 aa12.35□□□□□ -0.43
MDC1-209ENST00000613547 OR8K3Q8NH51 312 aa12.35□□□□□ -0.43
MDC1-209ENST00000613547 ZBED6CLQ96FA7 236 aaPredicted RBP12.35□□□□□ -0.43
MDC1-209ENST00000613547 LMF1Q96S06 567 aa12.35□□□□□ -0.43
MDC1-209ENST00000613547 DPY30Q9C005 99 aa12.35□□□□□ -0.43
MDC1-209ENST00000613547 CCDC134Q9H6E4 229 aa12.35□□□□□ -0.43
MDC1-209ENST00000613547 TCF7L2Q9NQB0 619 aa12.35□□□□□ -0.43
MDC1-209ENST00000613547 ZNF71Q9NQZ8 489 aaPredicted RBP12.35□□□□□ -0.43
MDC1-209ENST00000613547 ATP6V1HQ9UI12 483 aa12.35□□□□□ -0.43
MDC1-209ENST00000613547 EXO1Q9UQ84 846 aaKnown RBP12.35□□□□□ -0.43
MDC1-209ENST00000613547 ERVK-19Q9WJR5 959 aa12.35□□□□□ -0.43
MDC1-209ENST00000613547 PCSK5Q92824 1860 aa12.35□□□□□ -0.43
MDC1-209ENST00000613547 CFAP47Q6ZTR5 3102 aa12.34□□□□□ -0.43
MDC1-209ENST00000613547 DYTNA2CJ06 578 aa12.34□□□□□ -0.43
MDC1-209ENST00000613547 EIF4E1BA6NMX2 242 aaKnown RBP12.34□□□□□ -0.43
MDC1-209ENST00000613547 GABRR3A8MPY1 467 aa12.34□□□□□ -0.43
MDC1-209ENST00000613547 MYO1GB0I1T2 1018 aa12.34□□□□□ -0.43
MDC1-209ENST00000613547 FCHO1O14526 889 aa12.34□□□□□ -0.43
MDC1-209ENST00000613547 ZNF195O14628 629 aa12.34□□□□□ -0.43
MDC1-209ENST00000613547 UBDO15205 165 aa12.34□□□□□ -0.43
MDC1-209ENST00000613547 BCAS2O75934 225 aaPredicted RBP12.34□□□□□ -0.43
MDC1-209ENST00000613547 IGKV3-11P04433 115 aa12.34□□□□□ -0.43
MDC1-209ENST00000613547 CASRP41180 1078 aa12.34□□□□□ -0.43
MDC1-209ENST00000613547 CLNS1AP54105 237 aaKnown RBP12.34□□□□□ -0.43
MDC1-209ENST00000613547 C21orf58P58505 322 aa12.34□□□□□ -0.43
MDC1-209ENST00000613547 MAP4K2Q12851 820 aa12.34□□□□□ -0.43
MDC1-209ENST00000613547 DPY19L1Q2PZI1 675 aa12.34□□□□□ -0.43
MDC1-209ENST00000613547 PRICKLE4Q2TBC4 344 aa12.34□□□□□ -0.43
MDC1-209ENST00000613547 CPTPQ5TA50 214 aa12.34□□□□□ -0.43
MDC1-209ENST00000613547 HLA-DQA1Q5Y7H0 255 aa12.34□□□□□ -0.43
MDC1-209ENST00000613547 ANKRD26P1Q6NSI1 321 aa12.34□□□□□ -0.43
MDC1-209ENST00000613547 H3F3CQ6NXT2 135 aa12.34□□□□□ -0.43
MDC1-209ENST00000613547 PCSK4Q6UW60 755 aa12.34□□□□□ -0.43
MDC1-209ENST00000613547 IGFL3Q6UXB1 125 aa12.34□□□□□ -0.43
MDC1-209ENST00000613547 DGAT2L6Q6ZPD8 337 aa12.34□□□□□ -0.43
MDC1-209ENST00000613547 OR7G1Q8NGA0 311 aa12.34□□□□□ -0.43
MDC1-209ENST00000613547 OR9A2Q8NGT5 310 aa12.34□□□□□ -0.43
MDC1-209ENST00000613547 ZNF675Q8TD23 568 aa12.34□□□□□ -0.43
MDC1-209ENST00000613547 ZNF721Q8TF20 911 aa12.34□□□□□ -0.43
MDC1-209ENST00000613547 ERP27Q96DN0 273 aa12.34□□□□□ -0.43
MDC1-209ENST00000613547 OR52B2Q96RD2 323 aa12.34□□□□□ -0.43
MDC1-209ENST00000613547 NPHS2Q9NP85 383 aa12.34□□□□□ -0.43
MDC1-209ENST00000613547 STMN3Q9NZ72 180 aa12.34□□□□□ -0.43
MDC1-209ENST00000613547 MAT2BQ9NZL9 334 aa12.34□□□□□ -0.43
MDC1-209ENST00000613547 CFL2Q9Y281 166 aa12.34□□□□□ -0.43
MDC1-209ENST00000613547 CDK2AP1O14519 115 aa12.33□□□□□ -0.44
MDC1-209ENST00000613547 PRAMEF2O60811 474 aa12.33□□□□□ -0.44
MDC1-209ENST00000613547 GPC1P35052 558 aa12.33□□□□□ -0.44
MDC1-209ENST00000613547 IDH3AP50213 366 aa12.33□□□□□ -0.44
MDC1-209ENST00000613547 MANFP55145 182 aaKnown RBP12.33□□□□□ -0.44
MDC1-209ENST00000613547 SLC37A1P57057 533 aa12.33□□□□□ -0.44
MDC1-209ENST00000613547 STX1BP61266 288 aa12.33□□□□□ -0.44
MDC1-209ENST00000613547 RNF4P78317 190 aa12.33□□□□□ -0.44
MDC1-209ENST00000613547 ARG2P78540 354 aa12.33□□□□□ -0.44
MDC1-209ENST00000613547 FUT7Q11130 342 aa12.33□□□□□ -0.44
MDC1-209ENST00000613547 LTB4RQ15722 352 aa12.33□□□□□ -0.44
MDC1-209ENST00000613547 GSTA3Q16772 222 aa12.33□□□□□ -0.44
MDC1-209ENST00000613547 B3GNTL1Q67FW5 361 aaPredicted RBP12.33□□□□□ -0.44
MDC1-209ENST00000613547 FCRLBQ6BAA4 426 aa12.33□□□□□ -0.44
MDC1-209ENST00000613547 RIMKLAQ8IXN7 391 aa12.33□□□□□ -0.44
MDC1-209ENST00000613547 KRTCAP2Q8N6L1 136 aa12.33□□□□□ -0.44
MDC1-209ENST00000613547 ADCY4Q8NFM4 1077 aa12.33□□□□□ -0.44
MDC1-209ENST00000613547 THAP3Q8WTV1 239 aaPredicted RBP12.33□□□□□ -0.44
MDC1-209ENST00000613547 STON2Q8WXE9 905 aa12.33□□□□□ -0.44
MDC1-209ENST00000613547 SLC39A7Q92504 469 aa12.33□□□□□ -0.44
MDC1-209ENST00000613547 AMDHD1Q96NU7 426 aa12.33□□□□□ -0.44
MDC1-209ENST00000613547 GAL3ST4Q96RP7 486 aa12.33□□□□□ -0.44
MDC1-209ENST00000613547 ZBTB18Q99592 522 aa12.33□□□□□ -0.44
MDC1-209ENST00000613547 CCDC28BQ9BUN5 200 aa12.33□□□□□ -0.44
MDC1-209ENST00000613547 BHLHE41Q9C0J9 482 aaPredicted RBP12.33□□□□□ -0.44
MDC1-209ENST00000613547 RNF32Q9H0A6 362 aa12.33□□□□□ -0.44
MDC1-209ENST00000613547 CDCP1Q9H5V8 836 aa12.33□□□□□ -0.44
MDC1-209ENST00000613547 ACSS1Q9NUB1 689 aaPredicted RBP12.33□□□□□ -0.44
MDC1-209ENST00000613547 RYDENQ9NUL5 291 aaKnown RBP12.33□□□□□ -0.44
MDC1-209ENST00000613547 AIG1Q9NVV5 245 aa12.33□□□□□ -0.44
MDC1-209ENST00000613547 BCAP29Q9UHQ4 241 aa12.33□□□□□ -0.44
MDC1-209ENST00000613547 ZNF223Q9UK11 482 aaPredicted RBP12.33□□□□□ -0.44
MDC1-209ENST00000613547 MGAQ8IWI9 3026 aa12.33□□□□□ -0.44
MDC1-209ENST00000613547 IGSF10Q6WRI0 2623 aa12.33□□□□□ -0.44
MDC1-209ENST00000613547 FAM208BQ5VWN6 2430 aa12.32□□□□□ -0.44
MDC1-209ENST00000613547 PIEZO2Q9H5I5 2752 aa12.32□□□□□ -0.44
MDC1-209ENST00000613547 HRKO00198 91 aa12.32□□□□□ -0.44
MDC1-209ENST00000613547 COQ9O75208 318 aa12.32□□□□□ -0.44
MDC1-209ENST00000613547 ALDOCP09972 364 aaKnown RBP12.32□□□□□ -0.44
MDC1-209ENST00000613547 CT62P0C5K7 136 aa12.32□□□□□ -0.44
MDC1-209ENST00000613547 SSTR4P31391 388 aa12.32□□□□□ -0.44
MDC1-209ENST00000613547 MLF1P58340 268 aa12.32□□□□□ -0.44
MDC1-209ENST00000613547 IRX1P78414 480 aaPredicted RBP12.32□□□□□ -0.44
MDC1-209ENST00000613547 SRSF11Q05519 484 aaKnown RBP12.32□□□□□ -0.44
MDC1-209ENST00000613547 DUSP2Q05923 314 aa12.32□□□□□ -0.44
MDC1-209ENST00000613547 HSPB3Q12988 150 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms