RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 FAM13CQ8NE31 585 aa11.43□□□□□ -0.58
CBWD3-208ENST00000612050 CDC26Q8NHZ8 85 aa11.43□□□□□ -0.58
CBWD3-208ENST00000612050 FAM76AQ8TAV0 307 aa11.43□□□□□ -0.58
CBWD3-208ENST00000612050 CHTF18Q8WVB6 975 aa11.43□□□□□ -0.58
CBWD3-208ENST00000612050 TP53INP1Q96A56 240 aa11.43□□□□□ -0.58
CBWD3-208ENST00000612050 METTL2AQ96IZ6 378 aaKnown RBP11.43□□□□□ -0.58
CBWD3-208ENST00000612050 FAM173AQ9BQD7 235 aa11.43□□□□□ -0.58
CBWD3-208ENST00000612050 PARD6BQ9BYG5 372 aa11.43□□□□□ -0.58
CBWD3-208ENST00000612050 ACPTQ9BZG2 426 aa11.43□□□□□ -0.58
CBWD3-208ENST00000612050 STMN4Q9H169 189 aaPredicted RBP11.43□□□□□ -0.58
CBWD3-208ENST00000612050 CXorf21Q9HAI6 301 aa11.43□□□□□ -0.58
CBWD3-208ENST00000612050 PRODH2Q9UF12 536 aa11.43□□□□□ -0.58
CBWD3-208ENST00000612050 BCAP29Q9UHQ4 241 aa11.43□□□□□ -0.58
CBWD3-208ENST00000612050 ERRFI1Q9UJM3 462 aaPredicted RBP11.43□□□□□ -0.58
CBWD3-208ENST00000612050 WBP11Q9Y2W2 641 aaKnown RBP11.43□□□□□ -0.58
CBWD3-208ENST00000612050 UBR5O95071 2799 aaPredicted RBP11.42□□□□□ -0.58
CBWD3-208ENST00000612050 A0A1B0GTL3 188 aa11.42□□□□□ -0.58
CBWD3-208ENST00000612050 PRKNO60260 465 aaPredicted RBP11.42□□□□□ -0.58
CBWD3-208ENST00000612050 CDC40O60508 579 aaKnown RBP eCLIP11.42□□□□□ -0.58
CBWD3-208ENST00000612050 SLC19A2O60779 497 aa11.42□□□□□ -0.58
CBWD3-208ENST00000612050 RSL1D1O76021 490 aaKnown RBP11.42□□□□□ -0.58
CBWD3-208ENST00000612050 OR6B1O95007 311 aa11.42□□□□□ -0.58
CBWD3-208ENST00000612050 IGKV3-11P04433 115 aa11.42□□□□□ -0.58
CBWD3-208ENST00000612050 ATP1B1P05026 303 aa11.42□□□□□ -0.58
CBWD3-208ENST00000612050 CNR1P21554 472 aa11.42□□□□□ -0.58
CBWD3-208ENST00000612050 MST1P26927 711 aa11.42□□□□□ -0.58
CBWD3-208ENST00000612050 MPIP34949 423 aa11.42□□□□□ -0.58
CBWD3-208ENST00000612050 SLC37A1P57057 533 aa11.42□□□□□ -0.58
CBWD3-208ENST00000612050 GPR85P60893 370 aa11.42□□□□□ -0.58
CBWD3-208ENST00000612050 HMGCS1Q01581 520 aa11.42□□□□□ -0.58
CBWD3-208ENST00000612050 PIGGQ5H8A4 983 aa11.42□□□□□ -0.58
CBWD3-208ENST00000612050 TBCELQ5QJ74 424 aa11.42□□□□□ -0.58
CBWD3-208ENST00000612050 SLC22A10Q63ZE4 541 aa11.42□□□□□ -0.58
CBWD3-208ENST00000612050 SH2D5Q6ZV89 423 aa11.42□□□□□ -0.58
CBWD3-208ENST00000612050 C10orf107Q8IVU9 208 aa11.42□□□□□ -0.58
CBWD3-208ENST00000612050 C9orf40Q8IXQ3 194 aa11.42□□□□□ -0.58
CBWD3-208ENST00000612050 MREGQ8N565 214 aa11.42□□□□□ -0.58
CBWD3-208ENST00000612050 ZNF321PQ8N8H1 164 aa11.42□□□□□ -0.58
CBWD3-208ENST00000612050 BANPQ8N9N5 519 aa11.42□□□□□ -0.58
CBWD3-208ENST00000612050 TM4SF18Q96CE8 201 aa11.42□□□□□ -0.58
CBWD3-208ENST00000612050 SPACA9Q96E40 222 aaPredicted RBP11.42□□□□□ -0.58
CBWD3-208ENST00000612050 DTNBP1Q96EV8 351 aa11.42□□□□□ -0.58
CBWD3-208ENST00000612050 FAM111AQ96PZ2 611 aa11.42□□□□□ -0.58
CBWD3-208ENST00000612050 BBS4Q96RK4 519 aa11.42□□□□□ -0.58
CBWD3-208ENST00000612050 KCNA7Q96RP8 456 aa11.42□□□□□ -0.58
CBWD3-208ENST00000612050 WWTR1Q9GZV5 400 aa11.42□□□□□ -0.58
CBWD3-208ENST00000612050 OR10A5Q9H207 317 aa11.42□□□□□ -0.58
CBWD3-208ENST00000612050 CENPHQ9H3R5 247 aa11.42□□□□□ -0.58
CBWD3-208ENST00000612050 CNIH4Q9P003 139 aa11.42□□□□□ -0.58
CBWD3-208ENST00000612050 B4GALT7Q9UBV7 327 aa11.42□□□□□ -0.58
CBWD3-208ENST00000612050 ZNF225Q9UK10 706 aa11.42□□□□□ -0.58
CBWD3-208ENST00000612050 BOKQ9UMX3 212 aaPredicted RBP11.42□□□□□ -0.58
CBWD3-208ENST00000612050 DLGAP4Q9Y2H0 992 aa11.42□□□□□ -0.58
CBWD3-208ENST00000612050 NBASA2RRP1 2371 aa11.41□□□□□ -0.58
CBWD3-208ENST00000612050 FOXO6A8MYZ6 492 aa11.41□□□□□ -0.58
CBWD3-208ENST00000612050 CCL21O00585 134 aa11.41□□□□□ -0.58
CBWD3-208ENST00000612050 AZIN1O14977 448 aa11.41□□□□□ -0.58
CBWD3-208ENST00000612050 NPHS1O60500 1241 aa11.41□□□□□ -0.58
CBWD3-208ENST00000612050 SPAG7O75391 227 aa11.41□□□□□ -0.58
CBWD3-208ENST00000612050 SEC22BO75396 215 aa11.41□□□□□ -0.58
CBWD3-208ENST00000612050 IL3P08700 152 aa11.41□□□□□ -0.58
CBWD3-208ENST00000612050 NTSP30990 170 aa11.41□□□□□ -0.58
CBWD3-208ENST00000612050 SERPINB5P36952 375 aa11.41□□□□□ -0.58
CBWD3-208ENST00000612050 FEN1P39748 380 aaKnown RBP11.41□□□□□ -0.58
CBWD3-208ENST00000612050 NR0B1P51843 470 aaKnown RBP11.41□□□□□ -0.58
CBWD3-208ENST00000612050 DCAF7P61962 342 aa11.41□□□□□ -0.58
CBWD3-208ENST00000612050 KCNJ2P63252 427 aa11.41□□□□□ -0.58
CBWD3-208ENST00000612050 EBPQ15125 230 aaKnown RBP11.41□□□□□ -0.58
CBWD3-208ENST00000612050 C1QL3Q5VWW1 255 aa11.41□□□□□ -0.58
CBWD3-208ENST00000612050 GALNT18Q6P9A2 607 aa11.41□□□□□ -0.58
CBWD3-208ENST00000612050 SCIMPQ6UWF3 145 aa11.41□□□□□ -0.58
CBWD3-208ENST00000612050 C16orf47Q6ZP98 133 aaPredicted RBP11.41□□□□□ -0.58
CBWD3-208ENST00000612050 MDGA2Q7Z553 956 aa11.41□□□□□ -0.58
CBWD3-208ENST00000612050 C16orf52Q8NHV5 167 aa11.41□□□□□ -0.58
CBWD3-208ENST00000612050 TMEM109Q9BVC6 243 aa11.41□□□□□ -0.58
CBWD3-208ENST00000612050 TSPAN10Q9H1Z9 355 aaPredicted RBP11.41□□□□□ -0.58
CBWD3-208ENST00000612050 EHD3Q9NZN3 535 aa11.41□□□□□ -0.58
CBWD3-208ENST00000612050 SH3BGRL2Q9UJC5 107 aa11.41□□□□□ -0.58
CBWD3-208ENST00000612050 FIS1Q9Y3D6 152 aa11.41□□□□□ -0.58
CBWD3-208ENST00000612050 TENM4Q6N022 2769 aa11.4□□□□□ -0.58
CBWD3-208ENST00000612050 RP1L1Q8IWN7 2480 aaPredicted RBP11.4□□□□□ -0.58
CBWD3-208ENST00000612050 CTIFO43310 598 aaKnown RBP11.4□□□□□ -0.58
CBWD3-208ENST00000612050 LDLRP01130 860 aa11.4□□□□□ -0.58
CBWD3-208ENST00000612050 SSTR4P31391 388 aa11.4□□□□□ -0.58
CBWD3-208ENST00000612050 KRT20P35900 424 aa11.4□□□□□ -0.58
CBWD3-208ENST00000612050 CA7P43166 264 aa11.4□□□□□ -0.58
CBWD3-208ENST00000612050 HTR6P50406 440 aa11.4□□□□□ -0.58
CBWD3-208ENST00000612050 SMSP52788 366 aa11.4□□□□□ -0.58
CBWD3-208ENST00000612050 PPIAP62937 165 aaKnown RBP11.4□□□□□ -0.58
CBWD3-208ENST00000612050 PSPHP78330 225 aa11.4□□□□□ -0.58
CBWD3-208ENST00000612050 SRSF1Q07955 248 aaKnown RBP eCLIP11.4□□□□□ -0.58
CBWD3-208ENST00000612050 C2orf80Q0P641 193 aa11.4□□□□□ -0.58
CBWD3-208ENST00000612050 FUT7Q11130 342 aa11.4□□□□□ -0.58
CBWD3-208ENST00000612050 MAP4K2Q12851 820 aa11.4□□□□□ -0.58
CBWD3-208ENST00000612050 PCLAFQ15004 111 aa11.4□□□□□ -0.58
CBWD3-208ENST00000612050 ZNF750Q32MQ0 723 aa11.4□□□□□ -0.58
CBWD3-208ENST00000612050 ARHGAP11AQ6P4F7 1023 aa11.4□□□□□ -0.58
CBWD3-208ENST00000612050 RPTNQ6XPR3 784 aa11.4□□□□□ -0.58
CBWD3-208ENST00000612050 IKBIPQ70UQ0 350 aa11.4□□□□□ -0.58
CBWD3-208ENST00000612050 MAMDC2Q7Z304 686 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms