RNA–Protein interactions for RNA: ENST00000602710.5

UBE2E3-209, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-209ENST00000602710 CT62P0C5K7 136 aa17.83■□□□□ 0.45
UBE2E3-209ENST00000602710 PTPN4P29074 926 aa17.83■□□□□ 0.45
UBE2E3-209ENST00000602710 SOAT1P35610 550 aa17.83■□□□□ 0.45
UBE2E3-209ENST00000602710 STT3AP46977 705 aa17.83■□□□□ 0.45
UBE2E3-209ENST00000602710 MRPS35P82673 323 aaKnown RBP17.83■□□□□ 0.45
UBE2E3-209ENST00000602710 DEFB107AQ8IZN7 70 aa17.83■□□□□ 0.45
UBE2E3-209ENST00000602710 PSMA8Q8TAA3 256 aa17.83■□□□□ 0.45
UBE2E3-209ENST00000602710 PHF12Q96QT6 1004 aa17.83■□□□□ 0.45
UBE2E3-209ENST00000602710 GPATCH1Q9BRR8 931 aaKnown RBP17.83■□□□□ 0.45
UBE2E3-209ENST00000602710 TMEM121BQ9BXQ6 578 aaPredicted RBP17.83■□□□□ 0.45
UBE2E3-209ENST00000602710 PNO1Q9NRX1 252 aaKnown RBP17.83■□□□□ 0.45
UBE2E3-209ENST00000602710 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.83■□□□□ 0.45
UBE2E3-209ENST00000602710 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.83■□□□□ 0.45
UBE2E3-209ENST00000602710 NXT1Q9UKK6 140 aaKnown RBP17.83■□□□□ 0.45
UBE2E3-209ENST00000602710 ACSL6Q9UKU0 697 aa17.83■□□□□ 0.45
UBE2E3-209ENST00000602710 WASF3Q9UPY6 502 aa17.83■□□□□ 0.45
UBE2E3-209ENST00000602710 HNRNPCL1O60812 293 aaKnown RBP17.83■□□□□ 0.44
UBE2E3-209ENST00000602710 ALOX12BO75342 701 aa17.83■□□□□ 0.44
UBE2E3-209ENST00000602710 UMODP07911 640 aa17.83■□□□□ 0.44
UBE2E3-209ENST00000602710 ZCCHC18P0CG32 403 aa17.83■□□□□ 0.44
UBE2E3-209ENST00000602710 MC3RP41968 323 aa17.83■□□□□ 0.44
UBE2E3-209ENST00000602710 STAT5AP42229 794 aa17.83■□□□□ 0.44
UBE2E3-209ENST00000602710 PSME3P61289 254 aa17.83■□□□□ 0.44
UBE2E3-209ENST00000602710 RPS18P62269 152 aaKnown RBP17.83■□□□□ 0.44
UBE2E3-209ENST00000602710 MGAT2Q10469 447 aa17.83■□□□□ 0.44
UBE2E3-209ENST00000602710 PRICKLE4Q2TBC4 344 aa17.83■□□□□ 0.44
UBE2E3-209ENST00000602710 ZNF628Q5EBL2 1059 aa17.83■□□□□ 0.44
UBE2E3-209ENST00000602710 NANOGP8Q6NSW7 305 aa17.83■□□□□ 0.44
UBE2E3-209ENST00000602710 SIMC1Q8NDZ2 872 aa17.83■□□□□ 0.44
UBE2E3-209ENST00000602710 OR7G2Q8NG99 324 aa17.83■□□□□ 0.44
UBE2E3-209ENST00000602710 DNAJB8Q8NHS0 232 aa17.83■□□□□ 0.44
UBE2E3-209ENST00000602710 ELP4Q96EB1 424 aa17.83■□□□□ 0.44
UBE2E3-209ENST00000602710 BTBD10Q9BSF8 475 aa17.83■□□□□ 0.44
UBE2E3-209ENST00000602710 SCNM1Q9BWG6 230 aa17.83■□□□□ 0.44
UBE2E3-209ENST00000602710 C1orf21Q9H246 121 aa17.83■□□□□ 0.44
UBE2E3-209ENST00000602710 IKZF5Q9H5V7 419 aa17.83■□□□□ 0.44
UBE2E3-209ENST00000602710 NANOGQ9H9S0 305 aa17.83■□□□□ 0.44
UBE2E3-209ENST00000602710 CXorf21Q9HAI6 301 aa17.83■□□□□ 0.44
UBE2E3-209ENST00000602710 NEUROD4Q9HD90 331 aa17.83■□□□□ 0.44
UBE2E3-209ENST00000602710 MAT2BQ9NZL9 334 aa17.83■□□□□ 0.44
UBE2E3-209ENST00000602710 LOC101059948A0A1B0GTJ6 334 aa17.82■□□□□ 0.44
UBE2E3-209ENST00000602710 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.82■□□□□ 0.44
UBE2E3-209ENST00000602710 GYG2O15488 501 aa17.82■□□□□ 0.44
UBE2E3-209ENST00000602710 RAB40ALP0C0E4 278 aa17.82■□□□□ 0.44
UBE2E3-209ENST00000602710 F8A1P23610 371 aa17.82■□□□□ 0.44
UBE2E3-209ENST00000602710 SLC6A2P23975 617 aa17.82■□□□□ 0.44
UBE2E3-209ENST00000602710 CD82P27701 267 aa17.82■□□□□ 0.44
UBE2E3-209ENST00000602710 CCT3P49368 545 aaKnown RBP17.82■□□□□ 0.44
UBE2E3-209ENST00000602710 RASSF2P50749 326 aa17.82■□□□□ 0.44
UBE2E3-209ENST00000602710 SELPLGQ14242 412 aa17.82■□□□□ 0.44
UBE2E3-209ENST00000602710 TRMT12Q53H54 448 aaKnown RBP17.82■□□□□ 0.44
UBE2E3-209ENST00000602710 RUNDC3AQ59EK9 446 aa17.82■□□□□ 0.44
UBE2E3-209ENST00000602710 RABL3Q5HYI8 236 aa17.82■□□□□ 0.44
UBE2E3-209ENST00000602710 ZNF771Q7L3S4 317 aaPredicted RBP17.82■□□□□ 0.44
UBE2E3-209ENST00000602710 PGAM4Q8N0Y7 254 aa17.82■□□□□ 0.44
UBE2E3-209ENST00000602710 KIF2BQ8N4N8 673 aa17.82■□□□□ 0.44
UBE2E3-209ENST00000602710 RIT1Q92963 219 aa17.82■□□□□ 0.44
UBE2E3-209ENST00000602710 NKD1Q969G9 470 aa17.82■□□□□ 0.44
UBE2E3-209ENST00000602710 ANKRD27Q96NW4 1050 aa17.82■□□□□ 0.44
UBE2E3-209ENST00000602710 SLC35A5Q9BS91 424 aa17.82■□□□□ 0.44
UBE2E3-209ENST00000602710 SPTBN4Q9H254 2564 aa17.82■□□□□ 0.44
UBE2E3-209ENST00000602710 HRKO00198 91 aa17.81■□□□□ 0.44
UBE2E3-209ENST00000602710 TERTO14746 1132 aaKnown RBP17.81■□□□□ 0.44
UBE2E3-209ENST00000602710 TNNI3P19429 210 aa17.81■□□□□ 0.44
UBE2E3-209ENST00000602710 UQCRC2P22695 453 aa17.81■□□□□ 0.44
UBE2E3-209ENST00000602710 DLSTP36957 453 aa17.81■□□□□ 0.44
UBE2E3-209ENST00000602710 MTPNP58546 118 aa17.81■□□□□ 0.44
UBE2E3-209ENST00000602710 BIKQ13323 160 aa17.81■□□□□ 0.44
UBE2E3-209ENST00000602710 TGIF1Q15583 401 aa17.81■□□□□ 0.44
UBE2E3-209ENST00000602710 SPDYE7PQ495Y7 208 aa17.81■□□□□ 0.44
UBE2E3-209ENST00000602710 C16orf89Q6UX73 402 aa17.81■□□□□ 0.44
UBE2E3-209ENST00000602710 ANKRD37Q7Z713 158 aa17.81■□□□□ 0.44
UBE2E3-209ENST00000602710 DTX1Q86Y01 620 aa17.81■□□□□ 0.44
UBE2E3-209ENST00000602710 OR2Y1Q8NGV0 311 aa17.81■□□□□ 0.44
UBE2E3-209ENST00000602710 PNPT1Q8TCS8 783 aaKnown RBP17.81■□□□□ 0.44
UBE2E3-209ENST00000602710 ZFP90Q8TF47 636 aa17.81■□□□□ 0.44
UBE2E3-209ENST00000602710 PTPMT1Q8WUK0 201 aaPredicted RBP17.81■□□□□ 0.44
UBE2E3-209ENST00000602710 FAM120BQ96EK7 910 aaKnown RBP17.81■□□□□ 0.44
UBE2E3-209ENST00000602710 HOPXQ9BPY8 73 aaPredicted RBP17.81■□□□□ 0.44
UBE2E3-209ENST00000602710 TPT1P8Q9HAU6 139 aa17.81■□□□□ 0.44
UBE2E3-209ENST00000602710 THSD1Q9NS62 852 aa17.81■□□□□ 0.44
UBE2E3-209ENST00000602710 SEMA3GQ9NS98 782 aa17.81■□□□□ 0.44
UBE2E3-209ENST00000602710 FARSAQ9Y285 508 aaKnown RBP17.81■□□□□ 0.44
UBE2E3-209ENST00000602710 IGHV3-20A0A0C4DH32 117 aa17.8■□□□□ 0.44
UBE2E3-209ENST00000602710 RNF103-CHMP3A0A140T963 221 aa17.8■□□□□ 0.44
UBE2E3-209ENST00000602710 CLIC1O00299 241 aa17.8■□□□□ 0.44
UBE2E3-209ENST00000602710 UPK1AO00322 258 aa17.8■□□□□ 0.44
UBE2E3-209ENST00000602710 PLOD2O00469 737 aa17.8■□□□□ 0.44
UBE2E3-209ENST00000602710 NME6O75414 186 aaPredicted RBP17.8■□□□□ 0.44
UBE2E3-209ENST00000602710 PGDP52209 483 aa17.8■□□□□ 0.44
UBE2E3-209ENST00000602710 CASP9P55211 416 aa17.8■□□□□ 0.44
UBE2E3-209ENST00000602710 MAP4K2Q12851 820 aa17.8■□□□□ 0.44
UBE2E3-209ENST00000602710 DNASE1L3Q13609 305 aa17.8■□□□□ 0.44
UBE2E3-209ENST00000602710 ZNF267Q14586 743 aaPredicted RBP17.8■□□□□ 0.44
UBE2E3-209ENST00000602710 FHL5Q5TD97 284 aa17.8■□□□□ 0.44
UBE2E3-209ENST00000602710 ASRGL1Q7L266 308 aa17.8■□□□□ 0.44
UBE2E3-209ENST00000602710 SZRD1Q7Z422 152 aa17.8■□□□□ 0.44
UBE2E3-209ENST00000602710 GALNT12Q8IXK2 581 aa17.8■□□□□ 0.44
UBE2E3-209ENST00000602710 TRIML2Q8N7C3 387 aa17.8■□□□□ 0.44
UBE2E3-209ENST00000602710 AMER2Q8N7J2 671 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms