RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 TUBD1Q9UJT1 453 aa10.9□□□□□ -0.66
CHMP2A-207ENST00000600804 C3orf18Q9UK00 162 aa10.9□□□□□ -0.66
CHMP2A-207ENST00000600804 MKL2Q9ULH7 1088 aa10.9□□□□□ -0.66
CHMP2A-207ENST00000600804 PTRH2Q9Y3E5 179 aaKnown RBP10.9□□□□□ -0.66
CHMP2A-207ENST00000600804 ZNF780BQ9Y6R6 833 aa10.9□□□□□ -0.66
CHMP2A-207ENST00000600804 ESPL1Q14674 2120 aa10.9□□□□□ -0.67
CHMP2A-207ENST00000600804 GLOD5A6NK44 160 aa10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 TGFBR3LH3BV60 316 aa10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 FCHO1O14526 889 aa10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 AKAP10O43572 662 aa10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 SCN2BO60939 215 aa10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 PRKRAO75569 313 aaKnown RBP10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 LRATO95237 230 aa10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 ATP1B1P05026 303 aa10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 PGRP06401 933 aa10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 LAMP1P11279 417 aa10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 CPMP14384 443 aa10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 MPIP34949 423 aa10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 STT3AP46977 705 aa10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 ALDH9A1P49189 494 aa10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 XKP51811 444 aa10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 POLR2JP52435 117 aaKnown RBP10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 WNT3P56703 355 aa10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 BTG2P78543 158 aa10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 STX4Q12846 297 aa10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 ERV3-1Q14264 604 aa10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 NSDHLQ15738 373 aa10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 SPRED3Q2MJR0 410 aa10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 COQ5Q5HYK3 327 aa10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 PAOXQ6QHF9 649 aa10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 VPS37AQ8NEZ2 397 aa10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 CDC26Q8NHZ8 85 aa10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 ZNF675Q8TD23 568 aa10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 ADAMTS17Q8TE56 1095 aa10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 METTL21AQ8WXB1 218 aa10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 UCN3Q969E3 161 aa10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 GFM2Q969S9 779 aaKnown RBP10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 MIB2Q96AX9 1013 aa10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 RNF31Q96EP0 1072 aa10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 CNRIP1Q96F85 164 aaPredicted RBP10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 ZBED6CLQ96FA7 236 aaPredicted RBP10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 ABHD17AQ96GS6 310 aa10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 VPS50Q96JG6 964 aa10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 LRRC37BQ96QE4 947 aa10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 DUSP26Q9BV47 211 aa10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 CCDC106Q9BWC9 280 aa10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 ALOXE3Q9BYJ1 711 aa10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 RBCK1Q9BYM8 510 aa10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 SOX17Q9H6I2 414 aaPredicted RBP10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 GPN2Q9H9Y4 310 aaPredicted RBP10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 ADAP2Q9NPF8 381 aa10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 NECTIN3Q9NQS3 549 aa10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 SH3BP4Q9P0V3 963 aa10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 PPIEQ9UNP9 301 aaKnown RBP10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 ENTPD4Q9Y227 616 aa10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 MRPS18BQ9Y676 258 aaKnown RBP10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 DOCK10Q96BY6 2186 aa10.89□□□□□ -0.67
CHMP2A-207ENST00000600804 CREBBPQ92793 2442 aa10.88□□□□□ -0.67
CHMP2A-207ENST00000600804 ABCA12Q86UK0 2595 aa10.88□□□□□ -0.67
CHMP2A-207ENST00000600804 PRSS51A0A1B0GVH4 220 aa10.88□□□□□ -0.67
CHMP2A-207ENST00000600804 WASHC1A8K0Z3 465 aa10.88□□□□□ -0.67
CHMP2A-207ENST00000600804 ZNF891A8MT65 544 aaPredicted RBP10.88□□□□□ -0.67
CHMP2A-207ENST00000600804 CAPN14A8MX76 684 aa10.88□□□□□ -0.67
CHMP2A-207ENST00000600804 PDPK1O15530 556 aa10.88□□□□□ -0.67
CHMP2A-207ENST00000600804 LDB3O75112 727 aa10.88□□□□□ -0.67
CHMP2A-207ENST00000600804 CREG1O75629 220 aa10.88□□□□□ -0.67
CHMP2A-207ENST00000600804 CDC123O75794 336 aaPredicted RBP10.88□□□□□ -0.67
CHMP2A-207ENST00000600804 C8orf89P0DMQ9 161 aa10.88□□□□□ -0.67
CHMP2A-207ENST00000600804 PRKAR1AP10644 381 aa10.88□□□□□ -0.67
CHMP2A-207ENST00000600804 MAOAP21397 527 aa10.88□□□□□ -0.67
CHMP2A-207ENST00000600804 NTSP30990 170 aa10.88□□□□□ -0.67
CHMP2A-207ENST00000600804 S100A3P33764 101 aa10.88□□□□□ -0.67
CHMP2A-207ENST00000600804 PHC1P78364 1004 aa10.88□□□□□ -0.67
CHMP2A-207ENST00000600804 PLIN5Q00G26 463 aa10.88□□□□□ -0.67
CHMP2A-207ENST00000600804 CDC20Q12834 499 aa10.88□□□□□ -0.67
CHMP2A-207ENST00000600804 KLF10Q13118 480 aa10.88□□□□□ -0.67
CHMP2A-207ENST00000600804 MAPRE2Q15555 327 aa10.88□□□□□ -0.67
CHMP2A-207ENST00000600804 ELAVL1Q15717 326 aaKnown RBP10.88□□□□□ -0.67
CHMP2A-207ENST00000600804 PRSS53Q2L4Q9 553 aa10.88□□□□□ -0.67
CHMP2A-207ENST00000600804 MPEG1Q2M385 716 aa10.88□□□□□ -0.67
CHMP2A-207ENST00000600804 FAM174BQ3ZCQ3 159 aa10.88□□□□□ -0.67
CHMP2A-207ENST00000600804 ZNF385BQ569K4 471 aa10.88□□□□□ -0.67
CHMP2A-207ENST00000600804 DOPEY1Q5JWR5 2465 aa10.88□□□□□ -0.67
CHMP2A-207ENST00000600804 SPANXN4Q5MJ08 99 aa10.88□□□□□ -0.67
CHMP2A-207ENST00000600804 ANKRD37Q7Z713 158 aa10.88□□□□□ -0.67
CHMP2A-207ENST00000600804 LRRC25Q8N386 305 aaPredicted RBP10.88□□□□□ -0.67
CHMP2A-207ENST00000600804 OR7A2PQ8NGA2 310 aa10.88□□□□□ -0.67
CHMP2A-207ENST00000600804 OR9I1Q8NGQ6 314 aa10.88□□□□□ -0.67
CHMP2A-207ENST00000600804 GOT1L1Q8NHS2 421 aaPredicted RBP10.88□□□□□ -0.67
CHMP2A-207ENST00000600804 ZFP28Q8NHY6 868 aa10.88□□□□□ -0.67
CHMP2A-207ENST00000600804 C9orf43Q8TAL5 461 aaPredicted RBP10.88□□□□□ -0.67
CHMP2A-207ENST00000600804 SUN3Q8TAQ9 357 aa10.88□□□□□ -0.67
CHMP2A-207ENST00000600804 OR5P2Q8WZ92 322 aa10.88□□□□□ -0.67
CHMP2A-207ENST00000600804 TSLPQ969D9 159 aa10.88□□□□□ -0.67
CHMP2A-207ENST00000600804 EXOSC8Q96B26 276 aaKnown RBP10.88□□□□□ -0.67
CHMP2A-207ENST00000600804 CTHRC1Q96CG8 243 aa10.88□□□□□ -0.67
CHMP2A-207ENST00000600804 SPDL1Q96EA4 605 aa10.88□□□□□ -0.67
CHMP2A-207ENST00000600804 AMDHD1Q96NU7 426 aa10.88□□□□□ -0.67
CHMP2A-207ENST00000600804 NEUROD4Q9HD90 331 aa10.88□□□□□ -0.67
CHMP2A-207ENST00000600804 SLAMF7Q9NQ25 335 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms