RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 V9GYQ6 96 aa16.58■□□□□ 0.25
SHKBP1-224ENST00000600718 IGHV5-10-1A0A0J9YXX1 117 aa16.58■□□□□ 0.24
SHKBP1-224ENST00000600718 PLOD2O00469 737 aa16.58■□□□□ 0.24
SHKBP1-224ENST00000600718 LDB3O75112 727 aa16.58■□□□□ 0.24
SHKBP1-224ENST00000600718 MATN1P21941 496 aa16.58■□□□□ 0.24
SHKBP1-224ENST00000600718 GCGRP47871 477 aa16.58■□□□□ 0.24
SHKBP1-224ENST00000600718 ACY1Q03154 408 aa16.58■□□□□ 0.24
SHKBP1-224ENST00000600718 LRRC23Q53EV4 343 aaPredicted RBP16.58■□□□□ 0.24
SHKBP1-224ENST00000600718 LPCAT4Q643R3 524 aa16.58■□□□□ 0.24
SHKBP1-224ENST00000600718 ENPP6Q6UWR7 440 aa16.58■□□□□ 0.24
SHKBP1-224ENST00000600718 CCDC80Q76M96 950 aa16.58■□□□□ 0.24
SHKBP1-224ENST00000600718 SZRD1Q7Z422 152 aa16.58■□□□□ 0.24
SHKBP1-224ENST00000600718 ZC3H7AQ8IWR0 971 aaKnown RBP16.58■□□□□ 0.24
SHKBP1-224ENST00000600718 SHISA5Q8N114 240 aa16.58■□□□□ 0.24
SHKBP1-224ENST00000600718 CATSPER1Q8NEC5 780 aa16.58■□□□□ 0.24
SHKBP1-224ENST00000600718 ADCY4Q8NFM4 1077 aa16.58■□□□□ 0.24
SHKBP1-224ENST00000600718 ANKRD9Q96BM1 317 aaPredicted RBP16.58■□□□□ 0.24
SHKBP1-224ENST00000600718 PEX11GQ96HA9 241 aa16.58■□□□□ 0.24
SHKBP1-224ENST00000600718 LRCH1Q9Y2L9 728 aa16.58■□□□□ 0.24
SHKBP1-224ENST00000600718 CABIN1Q9Y6J0 2220 aa16.58■□□□□ 0.24
SHKBP1-224ENST00000600718 CLDN4O14493 209 aa16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 ZNF749O43361 778 aa16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 CTNSO60931 367 aa16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 SLITRK5O94991 958 aa16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 LDOC1O95751 146 aaPredicted RBP16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 ATP1B1P05026 303 aa16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 CKMT2P17540 419 aa16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 PTGER1P34995 402 aa16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 MC3RP41968 323 aa16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 PRKAG1P54619 331 aa16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 RPS26P62854 115 aaKnown RBP16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 ELOAQ14241 798 aaKnown RBP16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 LTB4RQ15722 352 aa16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 HMBOX1Q6NT76 420 aa16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 TNFAIP8L2Q6P589 184 aaPredicted RBP16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 TMEM154Q6P9G4 183 aa16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 TTLL10Q6ZVT0 673 aa16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 CBLL1Q75N03 491 aa16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 EIF3MQ7L2H7 374 aaKnown RBP16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 GALNT15Q8N3T1 639 aa16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 FAM86B1Q8N7N1 296 aa16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 NUP43Q8NFH3 380 aa16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 NFKBIDQ8NI38 313 aa16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 MIPOL1Q8TD10 442 aa16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 SLC47A1Q96FL8 570 aa16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 GFM1Q96RP9 751 aaKnown RBP16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 SYNDIG1Q9H7V2 258 aa16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 AGPAT4Q9NRZ5 378 aa16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 PTGFRNQ9P2B2 879 aa16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 ANGPT4Q9Y264 503 aa16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 DNAH14Q0VDD8 3507 aa16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 BDP1A6H8Y1 2624 aa16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 PRR33A8MZF0 331 aa16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 HMGN4O00479 90 aa16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 TPST1O60507 370 aa16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 IFI6P09912 130 aa16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 PEX2P28328 305 aa16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 KHKP50053 298 aa16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 MAT1AQ00266 395 aaKnown RBP16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 ID2Q02363 134 aa16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 AMIGO2Q86SJ2 522 aa16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 METTL25Q8N6Q8 603 aa16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 OR51Q1Q8NH59 317 aa16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 KAT2AQ92830 837 aa16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 CNDP2Q96KP4 475 aaKnown RBP16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 OR51I1Q9H343 314 aa16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 ADPRHL2Q9NX46 363 aa16.57■□□□□ 0.24
SHKBP1-224ENST00000600718 LNP1A1A4G5 178 aa16.56■□□□□ 0.24
SHKBP1-224ENST00000600718 TMEM247A6NEH6 219 aa16.56■□□□□ 0.24
SHKBP1-224ENST00000600718 FLRT2O43155 660 aa16.56■□□□□ 0.24
SHKBP1-224ENST00000600718 GCM2O75603 506 aaPredicted RBP16.56■□□□□ 0.24
SHKBP1-224ENST00000600718 BMP10O95393 424 aa16.56■□□□□ 0.24
SHKBP1-224ENST00000600718 HMGN2P05204 90 aaKnown RBP16.56■□□□□ 0.24
SHKBP1-224ENST00000600718 TFPTP0C1Z6 253 aa16.56■□□□□ 0.24
SHKBP1-224ENST00000600718 SLC35E2P0CK97 266 aa16.56■□□□□ 0.24
SHKBP1-224ENST00000600718 ALAS2P22557 587 aa16.56■□□□□ 0.24
SHKBP1-224ENST00000600718 MYBPC3Q14896 1274 aa16.56■□□□□ 0.24
SHKBP1-224ENST00000600718 ATP6AP1Q15904 470 aa16.56■□□□□ 0.24
SHKBP1-224ENST00000600718 LRRC36Q1X8D7 754 aa16.56■□□□□ 0.24
SHKBP1-224ENST00000600718 REEP3Q6NUK4 255 aa16.56■□□□□ 0.24
SHKBP1-224ENST00000600718 PRR23CQ6ZRP0 262 aa16.56■□□□□ 0.24
SHKBP1-224ENST00000600718 ANKFN1Q8N957 763 aa16.56■□□□□ 0.24
SHKBP1-224ENST00000600718 CENPNQ96H22 339 aaPredicted RBP16.56■□□□□ 0.24
SHKBP1-224ENST00000600718 CCDC74BQ96LY2 380 aa16.56■□□□□ 0.24
SHKBP1-224ENST00000600718 SEMA6AQ9H2E6 1030 aa16.56■□□□□ 0.24
SHKBP1-224ENST00000600718 SERHL2Q9H4I8 314 aa16.56■□□□□ 0.24
SHKBP1-224ENST00000600718 PRTFDC1Q9NRG1 225 aa16.56■□□□□ 0.24
SHKBP1-224ENST00000600718 TRPC4Q9UBN4 977 aa16.56■□□□□ 0.24
SHKBP1-224ENST00000600718 NDOR1Q9UHB4 597 aa16.56■□□□□ 0.24
SHKBP1-224ENST00000600718 ZNF451Q9Y4E5 1061 aa16.56■□□□□ 0.24
SHKBP1-224ENST00000600718 TMEM184BQ9Y519 407 aaPredicted RBP16.56■□□□□ 0.24
SHKBP1-224ENST00000600718 NCOR1O75376 2440 aa16.56■□□□□ 0.24
SHKBP1-224ENST00000600718 C5orf58C9J3I9 102 aa16.55■□□□□ 0.24
SHKBP1-224ENST00000600718 UPK1AO00322 258 aa16.55■□□□□ 0.24
SHKBP1-224ENST00000600718 NTN3O00634 580 aaPredicted RBP16.55■□□□□ 0.24
SHKBP1-224ENST00000600718 DSCR3O14972 297 aa16.55■□□□□ 0.24
SHKBP1-224ENST00000600718 ZNF682O95780 498 aa16.55■□□□□ 0.24
SHKBP1-224ENST00000600718 IFNA14P01570 189 aa16.55■□□□□ 0.24
SHKBP1-224ENST00000600718 OR12D1P0DN82 309 aa16.55■□□□□ 0.24
SHKBP1-224ENST00000600718 NKG7Q16617 165 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms