RNA–Protein interactions for RNA: ENST00000600499.5

LTBP4-228, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 2

Gene LTBP4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-228	ENST00000600499	FEN1	P39748	380 aa	Known RBP	13.58	□□□□□ -0.24
LTBP4-228	ENST00000600499	CLDN8	P56748	225 aa		13.58	□□□□□ -0.24
LTBP4-228	ENST00000600499	SLC37A1	P57057	533 aa		13.58	□□□□□ -0.24
LTBP4-228	ENST00000600499	MLF1	P58340	268 aa		13.58	□□□□□ -0.24
LTBP4-228	ENST00000600499	RAPSN	Q13702	412 aa		13.58	□□□□□ -0.24
LTBP4-228	ENST00000600499	MPEG1	Q2M385	716 aa		13.58	□□□□□ -0.24
LTBP4-228	ENST00000600499	ZNF628	Q5EBL2	1059 aa		13.58	□□□□□ -0.24
LTBP4-228	ENST00000600499	ACER2	Q5QJU3	275 aa		13.58	□□□□□ -0.24
LTBP4-228	ENST00000600499	B3GNTL1	Q67FW5	361 aa	Predicted RBP	13.58	□□□□□ -0.24
LTBP4-228	ENST00000600499	EPGN	Q6UW88	154 aa		13.58	□□□□□ -0.24
LTBP4-228	ENST00000600499	HSDL2	Q6YN16	418 aa		13.58	□□□□□ -0.24
LTBP4-228	ENST00000600499		Q6ZS92	163 aa		13.58	□□□□□ -0.24
LTBP4-228	ENST00000600499	R3HCC1L	Q7Z5L2	792 aa	Known RBP	13.58	□□□□□ -0.24
LTBP4-228	ENST00000600499	SPATA19	Q7Z5L4	167 aa		13.58	□□□□□ -0.24
LTBP4-228	ENST00000600499	CAMKMT	Q7Z624	323 aa		13.58	□□□□□ -0.24
LTBP4-228	ENST00000600499	RPS19BP1	Q86WX3	136 aa	Known RBP	13.58	□□□□□ -0.24
LTBP4-228	ENST00000600499	GALNT12	Q8IXK2	581 aa		13.58	□□□□□ -0.24
LTBP4-228	ENST00000600499	FAM9C	Q8IZT9	166 aa		13.58	□□□□□ -0.24
LTBP4-228	ENST00000600499	NATD1	Q8N6N6	113 aa		13.58	□□□□□ -0.24
LTBP4-228	ENST00000600499	SIRT6	Q8N6T7	355 aa		13.58	□□□□□ -0.24
LTBP4-228	ENST00000600499	RBMXL3	Q8N7X1	1067 aa	Known RBP	13.58	□□□□□ -0.24
LTBP4-228	ENST00000600499	ZNF321P	Q8N8H1	164 aa		13.58	□□□□□ -0.24
LTBP4-228	ENST00000600499	ZNF615	Q8N8J6	731 aa		13.58	□□□□□ -0.24
LTBP4-228	ENST00000600499	OR7G1	Q8NGA0	311 aa		13.58	□□□□□ -0.24
LTBP4-228	ENST00000600499	COQ8B	Q96D53	544 aa		13.58	□□□□□ -0.24
LTBP4-228	ENST00000600499	DEFB126	Q9BYW3	111 aa		13.58	□□□□□ -0.24
LTBP4-228	ENST00000600499	OR8D2	Q9GZM6	311 aa		13.58	□□□□□ -0.24
LTBP4-228	ENST00000600499	MIEF1	Q9NQG6	463 aa		13.58	□□□□□ -0.24
LTBP4-228	ENST00000600499	GIMAP4	Q9NUV9	329 aa		13.58	□□□□□ -0.24
LTBP4-228	ENST00000600499	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
LTBP4-228	ENST00000600499	PTGFRN	Q9P2B2	879 aa		13.58	□□□□□ -0.24
LTBP4-228	ENST00000600499	MARCO	Q9UEW3	520 aa	Predicted RBP	13.58	□□□□□ -0.24
LTBP4-228	ENST00000600499	USH1C	Q9Y6N9	552 aa		13.58	□□□□□ -0.24
LTBP4-228	ENST00000600499	BOD1L1	Q8NFC6	3051 aa		13.57	□□□□□ -0.24
LTBP4-228	ENST00000600499	TRBV11-1	A0A0K0K1C0	115 aa		13.57	□□□□□ -0.24
LTBP4-228	ENST00000600499	HRK	O00198	91 aa		13.57	□□□□□ -0.24
LTBP4-228	ENST00000600499	PLOD2	O00469	737 aa		13.57	□□□□□ -0.24
LTBP4-228	ENST00000600499	SCAMP2	O15127	329 aa	Known RBP	13.57	□□□□□ -0.24
LTBP4-228	ENST00000600499	PRKN	O60260	465 aa	Predicted RBP	13.57	□□□□□ -0.24
LTBP4-228	ENST00000600499	PLOD3	O60568	738 aa		13.57	□□□□□ -0.24
LTBP4-228	ENST00000600499	EDF1	O60869	148 aa	Known RBP	13.57	□□□□□ -0.24
LTBP4-228	ENST00000600499	KIT	P10721	976 aa		13.57	□□□□□ -0.24
LTBP4-228	ENST00000600499	DDX5	P17844	614 aa	Known RBP	13.57	□□□□□ -0.24
LTBP4-228	ENST00000600499	PRPS1L1	P21108	318 aa		13.57	□□□□□ -0.24
LTBP4-228	ENST00000600499	EPHA3	P29320	983 aa		13.57	□□□□□ -0.24
LTBP4-228	ENST00000600499	MPI	P34949	423 aa		13.57	□□□□□ -0.24
LTBP4-228	ENST00000600499	DIO3	P55073	304 aa		13.57	□□□□□ -0.24
LTBP4-228	ENST00000600499	RNF4	P78317	190 aa		13.57	□□□□□ -0.24
LTBP4-228	ENST00000600499	ZNF267	Q14586	743 aa	Predicted RBP	13.57	□□□□□ -0.24
LTBP4-228	ENST00000600499	PTGR1	Q14914	329 aa		13.57	□□□□□ -0.24
LTBP4-228	ENST00000600499	MLC1	Q15049	377 aa		13.57	□□□□□ -0.24
LTBP4-228	ENST00000600499	CCDC116	Q8IYX3	515 aa		13.57	□□□□□ -0.24
LTBP4-228	ENST00000600499	ZNF441	Q8N8Z8	693 aa		13.57	□□□□□ -0.24
LTBP4-228	ENST00000600499	OR5L2	Q8NGL0	311 aa		13.57	□□□□□ -0.24
LTBP4-228	ENST00000600499	EXOSC8	Q96B26	276 aa	Known RBP	13.57	□□□□□ -0.24
LTBP4-228	ENST00000600499	C1orf50	Q9BV19	199 aa		13.57	□□□□□ -0.24
LTBP4-228	ENST00000600499	BRINP2	Q9C0B6	783 aa		13.57	□□□□□ -0.24
LTBP4-228	ENST00000600499	EPS8L2	Q9H6S3	715 aa		13.57	□□□□□ -0.24
LTBP4-228	ENST00000600499	SLAMF7	Q9NQ25	335 aa		13.57	□□□□□ -0.24
LTBP4-228	ENST00000600499	ZNF71	Q9NQZ8	489 aa	Predicted RBP	13.57	□□□□□ -0.24
LTBP4-228	ENST00000600499	ACSS1	Q9NUB1	689 aa	Predicted RBP	13.57	□□□□□ -0.24
LTBP4-228	ENST00000600499	STMN3	Q9NZ72	180 aa		13.57	□□□□□ -0.24
LTBP4-228	ENST00000600499	COPS7A	Q9UBW8	275 aa		13.57	□□□□□ -0.24
LTBP4-228	ENST00000600499	ERVK-19	Q9WJR5	959 aa		13.57	□□□□□ -0.24
LTBP4-228	ENST00000600499	ENTPD4	Q9Y227	616 aa		13.57	□□□□□ -0.24
LTBP4-228	ENST00000600499		A0A087WV62	115 aa		13.56	□□□□□ -0.24
LTBP4-228	ENST00000600499	MAN1A2	O60476	641 aa		13.56	□□□□□ -0.24
LTBP4-228	ENST00000600499	BCAS2	O75934	225 aa	Predicted RBP	13.56	□□□□□ -0.24
LTBP4-228	ENST00000600499	C1QL1	O75973	258 aa		13.56	□□□□□ -0.24
LTBP4-228	ENST00000600499	CBX7	O95931	251 aa		13.56	□□□□□ -0.24
LTBP4-228	ENST00000600499	ALDOC	P09972	364 aa	Known RBP	13.56	□□□□□ -0.24
LTBP4-228	ENST00000600499	CD97	P48960	835 aa		13.56	□□□□□ -0.24
LTBP4-228	ENST00000600499	MRPL19	P49406	292 aa	Known RBP	13.56	□□□□□ -0.24
LTBP4-228	ENST00000600499	KLRB1	Q12918	225 aa		13.56	□□□□□ -0.24
LTBP4-228	ENST00000600499	SLC9B1	Q4ZJI4	515 aa		13.56	□□□□□ -0.24
LTBP4-228	ENST00000600499	ZNF385B	Q569K4	471 aa		13.56	□□□□□ -0.24
LTBP4-228	ENST00000600499	FHL5	Q5TD97	284 aa		13.56	□□□□□ -0.24
LTBP4-228	ENST00000600499	ABHD17B	Q5VST6	288 aa		13.56	□□□□□ -0.24
LTBP4-228	ENST00000600499	C9orf40	Q8IXQ3	194 aa		13.56	□□□□□ -0.24
LTBP4-228	ENST00000600499	VWA5B2	Q8N398	1253 aa		13.56	□□□□□ -0.24
LTBP4-228	ENST00000600499	ZADH2	Q8N4Q0	377 aa		13.56	□□□□□ -0.24
LTBP4-228	ENST00000600499	C17orf47	Q8NEP4	570 aa		13.56	□□□□□ -0.24
LTBP4-228	ENST00000600499	CEP70	Q8NHQ1	597 aa		13.56	□□□□□ -0.24
LTBP4-228	ENST00000600499	PPP1R36	Q96LQ0	422 aa		13.56	□□□□□ -0.24
LTBP4-228	ENST00000600499	AMDHD1	Q96NU7	426 aa		13.56	□□□□□ -0.24
LTBP4-228	ENST00000600499	OR10A5	Q9H207	317 aa		13.56	□□□□□ -0.24
LTBP4-228	ENST00000600499	GLIPR2	Q9H4G4	154 aa		13.56	□□□□□ -0.24
LTBP4-228	ENST00000600499	CDCP1	Q9H5V8	836 aa		13.56	□□□□□ -0.24
LTBP4-228	ENST00000600499	WDR55	Q9H6Y2	383 aa	Predicted RBP	13.56	□□□□□ -0.24
LTBP4-228	ENST00000600499	AIG1	Q9NVV5	245 aa		13.56	□□□□□ -0.24
LTBP4-228	ENST00000600499	MYOT	Q9UBF9	498 aa		13.56	□□□□□ -0.24
LTBP4-228	ENST00000600499	ANAPC2	Q9UJX6	822 aa		13.56	□□□□□ -0.24
LTBP4-228	ENST00000600499	PCDHGB6	Q9Y5F9	930 aa		13.56	□□□□□ -0.24
LTBP4-228	ENST00000600499		A8MUI8	341 aa		13.55	□□□□□ -0.24
LTBP4-228	ENST00000600499	PSMG1	O95456	288 aa		13.55	□□□□□ -0.24
LTBP4-228	ENST00000600499	WDPCP	O95876	746 aa		13.55	□□□□□ -0.24
LTBP4-228	ENST00000600499	NT5E	P21589	574 aa		13.55	□□□□□ -0.24
LTBP4-228	ENST00000600499	HPCAL1	P37235	193 aa		13.55	□□□□□ -0.24
LTBP4-228	ENST00000600499	TNFSF10	P50591	281 aa		13.55	□□□□□ -0.24
LTBP4-228	ENST00000600499	EBP	Q15125	230 aa	Known RBP	13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms