RNA–Protein interactions for RNA: ENST00000600012.5

UPF1-208, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-208ENST00000600012 ABHD13Q7L211 337 aa11.88□□□□□ -0.51
UPF1-208ENST00000600012 SLC34A3Q8N130 599 aa11.88□□□□□ -0.51
UPF1-208ENST00000600012 TMEM132CQ8N3T6 1108 aa11.88□□□□□ -0.51
UPF1-208ENST00000600012 KIF2BQ8N4N8 673 aa11.88□□□□□ -0.51
UPF1-208ENST00000600012 DTWD1Q8N5C7 304 aa11.88□□□□□ -0.51
UPF1-208ENST00000600012 ACOT4Q8N9L9 421 aa11.88□□□□□ -0.51
UPF1-208ENST00000600012 TTC29Q8NA56 475 aaPredicted RBP11.88□□□□□ -0.51
UPF1-208ENST00000600012 RBM15BQ8NDT2 890 aaKnown RBP11.88□□□□□ -0.51
UPF1-208ENST00000600012 SRFBP1Q8NEF9 429 aaKnown RBP11.88□□□□□ -0.51
UPF1-208ENST00000600012 OR7A2PQ8NGA2 310 aa11.88□□□□□ -0.51
UPF1-208ENST00000600012 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.88□□□□□ -0.51
UPF1-208ENST00000600012 DNAJB14Q8TBM8 379 aa11.88□□□□□ -0.51
UPF1-208ENST00000600012 GRHL3Q8TE85 626 aa11.88□□□□□ -0.51
UPF1-208ENST00000600012 TM4SF18Q96CE8 201 aa11.88□□□□□ -0.51
UPF1-208ENST00000600012 C10orf90Q96M02 699 aa11.88□□□□□ -0.51
UPF1-208ENST00000600012 ZNF285Q96NJ3 590 aa11.88□□□□□ -0.51
UPF1-208ENST00000600012 LHPPQ9H008 270 aa11.88□□□□□ -0.51
UPF1-208ENST00000600012 ENAMQ9NRM1 1142 aa11.88□□□□□ -0.51
UPF1-208ENST00000600012 SEMA3GQ9NS98 782 aa11.88□□□□□ -0.51
UPF1-208ENST00000600012 TEX10Q9NXF1 929 aaPredicted RBP11.88□□□□□ -0.51
UPF1-208ENST00000600012 FBXW2Q9UKT8 454 aa11.88□□□□□ -0.51
UPF1-208ENST00000600012 ABCA12Q86UK0 2595 aa11.88□□□□□ -0.51
UPF1-208ENST00000600012 CRYBG3Q68DQ2 2970 aa11.88□□□□□ -0.51
UPF1-208ENST00000600012 A0A1W2PP18 115 aa11.87□□□□□ -0.51
UPF1-208ENST00000600012 BBIP1A8MTZ0 92 aa11.87□□□□□ -0.51
UPF1-208ENST00000600012 CFLARO15519 480 aa11.87□□□□□ -0.51
UPF1-208ENST00000600012 SRPX2O60687 465 aaPredicted RBP11.87□□□□□ -0.51
UPF1-208ENST00000600012 HNRNPCL1O60812 293 aaKnown RBP11.87□□□□□ -0.51
UPF1-208ENST00000600012 PRKRAO75569 313 aaKnown RBP11.87□□□□□ -0.51
UPF1-208ENST00000600012 SCELO95171 688 aa11.87□□□□□ -0.51
UPF1-208ENST00000600012 FAM58BPP0C7Q3 252 aa11.87□□□□□ -0.51
UPF1-208ENST00000600012 EDN3P14138 238 aa11.87□□□□□ -0.51
UPF1-208ENST00000600012 PRPS1L1P21108 318 aa11.87□□□□□ -0.51
UPF1-208ENST00000600012 S100A3P33764 101 aa11.87□□□□□ -0.51
UPF1-208ENST00000600012 ARFIP1P53367 373 aa11.87□□□□□ -0.51
UPF1-208ENST00000600012 MTTPP55157 894 aa11.87□□□□□ -0.51
UPF1-208ENST00000600012 C21orf58P58505 322 aa11.87□□□□□ -0.51
UPF1-208ENST00000600012 PHC1P78364 1004 aa11.87□□□□□ -0.51
UPF1-208ENST00000600012 OLR1P78380 273 aa11.87□□□□□ -0.51
UPF1-208ENST00000600012 PLIN5Q00G26 463 aa11.87□□□□□ -0.51
UPF1-208ENST00000600012 STX5Q13190 355 aa11.87□□□□□ -0.51
UPF1-208ENST00000600012 SLAMF1Q13291 335 aa11.87□□□□□ -0.51
UPF1-208ENST00000600012 ZNF169Q14929 603 aaPredicted RBP11.87□□□□□ -0.51
UPF1-208ENST00000600012 TLR1Q15399 786 aa11.87□□□□□ -0.51
UPF1-208ENST00000600012 FAM214AQ32MH5 1076 aa11.87□□□□□ -0.51
UPF1-208ENST00000600012 ZNF385BQ569K4 471 aa11.87□□□□□ -0.51
UPF1-208ENST00000600012 PAGE3Q5JUK9 113 aa11.87□□□□□ -0.51
UPF1-208ENST00000600012 OR4F3Q6IEY1 312 aa11.87□□□□□ -0.51
UPF1-208ENST00000600012 MRM1Q6IN84 353 aaKnown RBP11.87□□□□□ -0.51
UPF1-208ENST00000600012 IKBIPQ70UQ0 350 aa11.87□□□□□ -0.51
UPF1-208ENST00000600012 PDSS2Q86YH6 399 aa11.87□□□□□ -0.51
UPF1-208ENST00000600012 ZCCHC7Q8N3Z6 543 aaKnown RBP11.87□□□□□ -0.51
UPF1-208ENST00000600012 ARHGEF39Q8N4T4 335 aa11.87□□□□□ -0.51
UPF1-208ENST00000600012 FAR1Q8WVX9 515 aa11.87□□□□□ -0.51
UPF1-208ENST00000600012 UCN3Q969E3 161 aa11.87□□□□□ -0.51
UPF1-208ENST00000600012 TESCQ96BS2 214 aa11.87□□□□□ -0.51
UPF1-208ENST00000600012 ROGDIQ9GZN7 287 aa11.87□□□□□ -0.51
UPF1-208ENST00000600012 LRMDAQ9H2I8 198 aa11.87□□□□□ -0.51
UPF1-208ENST00000600012 REEP4Q9H6H4 257 aa11.87□□□□□ -0.51
UPF1-208ENST00000600012 SOX17Q9H6I2 414 aaPredicted RBP11.87□□□□□ -0.51
UPF1-208ENST00000600012 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.87□□□□□ -0.51
UPF1-208ENST00000600012 TMEM45AQ9NWC5 275 aa11.87□□□□□ -0.51
UPF1-208ENST00000600012 TAS2R1Q9NYW7 299 aa11.87□□□□□ -0.51
UPF1-208ENST00000600012 CTSFQ9UBX1 484 aa11.87□□□□□ -0.51
UPF1-208ENST00000600012 LEF1Q9UJU2 399 aaPredicted RBP11.87□□□□□ -0.51
UPF1-208ENST00000600012 NDUFAF1Q9Y375 327 aa11.87□□□□□ -0.51
UPF1-208ENST00000600012 NAALAD2Q9Y3Q0 740 aa11.87□□□□□ -0.51
UPF1-208ENST00000600012 CELSR2Q9HCU4 2923 aa11.87□□□□□ -0.51
UPF1-208ENST00000600012 HYKKA2RU49 373 aa11.86□□□□□ -0.51
UPF1-208ENST00000600012 FITM1A5D6W6 292 aa11.86□□□□□ -0.51
UPF1-208ENST00000600012 TXNDC9O14530 226 aa11.86□□□□□ -0.51
UPF1-208ENST00000600012 GYG2O15488 501 aa11.86□□□□□ -0.51
UPF1-208ENST00000600012 B3GALT2O43825 422 aa11.86□□□□□ -0.51
UPF1-208ENST00000600012 DNAJB6O75190 326 aa11.86□□□□□ -0.51
UPF1-208ENST00000600012 PGRP06401 933 aa11.86□□□□□ -0.51
UPF1-208ENST00000600012 EFNA1P20827 205 aaPredicted RBP11.86□□□□□ -0.51
UPF1-208ENST00000600012 CPOXP36551 454 aa11.86□□□□□ -0.51
UPF1-208ENST00000600012 ALDH9A1P49189 494 aa11.86□□□□□ -0.51
UPF1-208ENST00000600012 MNAT1P51948 309 aa11.86□□□□□ -0.51
UPF1-208ENST00000600012 PDE7AQ13946 482 aa11.86□□□□□ -0.51
UPF1-208ENST00000600012 RUNX2Q13950 521 aa11.86□□□□□ -0.51
UPF1-208ENST00000600012 PRSS53Q2L4Q9 553 aa11.86□□□□□ -0.51
UPF1-208ENST00000600012 MUM1Q2TAK8 710 aa11.86□□□□□ -0.51
UPF1-208ENST00000600012 C1QL3Q5VWW1 255 aa11.86□□□□□ -0.51
UPF1-208ENST00000600012 FAM180AQ6UWF9 173 aa11.86□□□□□ -0.51
UPF1-208ENST00000600012 ISLR2Q6UXK2 745 aa11.86□□□□□ -0.51
UPF1-208ENST00000600012 SHISA6Q6ZSJ9 500 aa11.86□□□□□ -0.51
UPF1-208ENST00000600012 ASRGL1Q7L266 308 aa11.86□□□□□ -0.51
UPF1-208ENST00000600012 ANKRD46Q86W74 232 aa11.86□□□□□ -0.51
UPF1-208ENST00000600012 METTL27Q8N6F8 245 aaPredicted RBP11.86□□□□□ -0.51
UPF1-208ENST00000600012 OR11G2Q8NGC1 345 aa11.86□□□□□ -0.51
UPF1-208ENST00000600012 OR5T3Q8NGG3 340 aa11.86□□□□□ -0.51
UPF1-208ENST00000600012 OR9A4Q8NGU2 314 aa11.86□□□□□ -0.51
UPF1-208ENST00000600012 TSPEARQ8WU66 669 aa11.86□□□□□ -0.51
UPF1-208ENST00000600012 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.86□□□□□ -0.51
UPF1-208ENST00000600012 KLHL29Q96CT2 875 aa11.86□□□□□ -0.51
UPF1-208ENST00000600012 THOC3Q96J01 351 aaKnown RBP11.86□□□□□ -0.51
UPF1-208ENST00000600012 SERINC2Q96SA4 455 aa11.86□□□□□ -0.51
UPF1-208ENST00000600012 MAPKAP1Q9BPZ7 522 aa11.86□□□□□ -0.51
UPF1-208ENST00000600012 BTBD10Q9BSF8 475 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms