RNA–Protein interactions for RNA: ENST00000599097.1

HOMER3-210, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 770 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-210ENST00000599097 C15orf38-AP3S2A0A0A6YYH1 394 aa16.05■□□□□ 0.16
HOMER3-210ENST00000599097 GOSR1O95249 250 aa16.05■□□□□ 0.16
HOMER3-210ENST00000599097 CLDN9O95484 217 aa16.05■□□□□ 0.16
HOMER3-210ENST00000599097 IL2RAP01589 272 aa16.05■□□□□ 0.16
HOMER3-210ENST00000599097 CELA3AP09093 270 aa16.05■□□□□ 0.16
HOMER3-210ENST00000599097 GTF2H2Q13888 395 aa16.05■□□□□ 0.16
HOMER3-210ENST00000599097 CPSF6Q16630 551 aaKnown RBP eCLIP16.05■□□□□ 0.16
HOMER3-210ENST00000599097 C18orf63Q68DL7 685 aa16.05■□□□□ 0.16
HOMER3-210ENST00000599097 RTL6Q6ICC9 239 aa16.05■□□□□ 0.16
HOMER3-210ENST00000599097 MRM1Q6IN84 353 aaKnown RBP16.05■□□□□ 0.16
HOMER3-210ENST00000599097 GTF2H2CQ6P1K8 395 aa16.05■□□□□ 0.16
HOMER3-210ENST00000599097 SCIMPQ6UWF3 145 aa16.05■□□□□ 0.16
HOMER3-210ENST00000599097 KIF18BQ86Y91 864 aa16.05■□□□□ 0.16
HOMER3-210ENST00000599097 L3MBTL4Q8NA19 623 aa16.05■□□□□ 0.16
HOMER3-210ENST00000599097 OR7G1Q8NGA0 311 aa16.05■□□□□ 0.16
HOMER3-210ENST00000599097 OR10G3Q8NGC4 313 aa16.05■□□□□ 0.16
HOMER3-210ENST00000599097 FBXO25Q8TCJ0 367 aa16.05■□□□□ 0.16
HOMER3-210ENST00000599097 KCTD4Q8WVF5 259 aa16.05■□□□□ 0.16
HOMER3-210ENST00000599097 NXNL1Q96CM4 212 aa16.05■□□□□ 0.16
HOMER3-210ENST00000599097 RMND5BQ96G75 393 aaPredicted RBP16.05■□□□□ 0.16
HOMER3-210ENST00000599097 POLDIP3Q9BY77 421 aaKnown RBP16.05■□□□□ 0.16
HOMER3-210ENST00000599097 ZNF629Q9UEG4 869 aaPredicted RBP16.05■□□□□ 0.16
HOMER3-210ENST00000599097 ADAM29Q9UKF5 820 aa16.05■□□□□ 0.16
HOMER3-210ENST00000599097 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.05■□□□□ 0.16
HOMER3-210ENST00000599097 GOLGA6L10A6NI86 522 aa16.04■□□□□ 0.16
HOMER3-210ENST00000599097 LRRC3CA6NJW4 275 aa16.04■□□□□ 0.16
HOMER3-210ENST00000599097 ZNF354AO60765 605 aaPredicted RBP16.04■□□□□ 0.16
HOMER3-210ENST00000599097 KLHL2O95198 593 aa16.04■□□□□ 0.16
HOMER3-210ENST00000599097 AIFM1O95831 613 aa16.04■□□□□ 0.16
HOMER3-210ENST00000599097 C1QAP02745 245 aa16.04■□□□□ 0.16
HOMER3-210ENST00000599097 RBP1P09455 135 aa16.04■□□□□ 0.16
HOMER3-210ENST00000599097 MTHFD2P13995 350 aa16.04■□□□□ 0.16
HOMER3-210ENST00000599097 TYK2P29597 1187 aa16.04■□□□□ 0.16
HOMER3-210ENST00000599097 DNAJA1P31689 397 aaKnown RBP16.04■□□□□ 0.16
HOMER3-210ENST00000599097 BSGP35613 385 aa16.04■□□□□ 0.16
HOMER3-210ENST00000599097 CCNG1P51959 295 aa16.04■□□□□ 0.16
HOMER3-210ENST00000599097 PPP2R2AP63151 447 aa16.04■□□□□ 0.16
HOMER3-210ENST00000599097 DLG1Q12959 904 aa16.04■□□□□ 0.16
HOMER3-210ENST00000599097 TTC19Q6DKK2 380 aaPredicted RBP16.04■□□□□ 0.16
HOMER3-210ENST00000599097 LYPD8Q6UX82 237 aa16.04■□□□□ 0.16
HOMER3-210ENST00000599097 GOLGA7Q7Z5G4 137 aa16.04■□□□□ 0.16
HOMER3-210ENST00000599097 CENPLQ8N0S6 344 aaPredicted RBP16.04■□□□□ 0.16
HOMER3-210ENST00000599097 OR4K14Q8NGD5 310 aa16.04■□□□□ 0.16
HOMER3-210ENST00000599097 GOT1L1Q8NHS2 421 aaPredicted RBP16.04■□□□□ 0.16
HOMER3-210ENST00000599097 FAM222BQ8WU58 562 aa16.04■□□□□ 0.16
HOMER3-210ENST00000599097 FOXC2Q99958 501 aa16.04■□□□□ 0.16
HOMER3-210ENST00000599097 SORBS1Q9BX66 1292 aaKnown RBP16.04■□□□□ 0.16
HOMER3-210ENST00000599097 TSPYL1Q9H0U9 437 aa16.04■□□□□ 0.16
HOMER3-210ENST00000599097 SEMA4BQ9NPR2 832 aaPredicted RBP16.04■□□□□ 0.16
HOMER3-210ENST00000599097 NMRK1Q9NWW6 199 aa16.04■□□□□ 0.16
HOMER3-210ENST00000599097 SPRR3Q9UBC9 169 aa16.04■□□□□ 0.16
HOMER3-210ENST00000599097 CNOT11Q9UKZ1 510 aaKnown RBP16.04■□□□□ 0.16
HOMER3-210ENST00000599097 ASB4Q9Y574 426 aa16.04■□□□□ 0.16
HOMER3-210ENST00000599097 NPFFR2Q9Y5X5 522 aa16.04■□□□□ 0.16
HOMER3-210ENST00000599097 A0A096LPK6 155 aa16.03■□□□□ 0.16
HOMER3-210ENST00000599097 SYT5O00445 386 aa16.03■□□□□ 0.16
HOMER3-210ENST00000599097 TRIM3O75382 744 aaPredicted RBP16.03■□□□□ 0.16
HOMER3-210ENST00000599097 FAM155BO75949 473 aa16.03■□□□□ 0.16
HOMER3-210ENST00000599097 EPPINO95925 133 aa16.03■□□□□ 0.16
HOMER3-210ENST00000599097 C2P06681 752 aa16.03■□□□□ 0.16
HOMER3-210ENST00000599097 CASQ1P31415 396 aa16.03■□□□□ 0.16
HOMER3-210ENST00000599097 UQCRC1P31930 480 aa16.03■□□□□ 0.16
HOMER3-210ENST00000599097 TIMP3P35625 211 aa16.03■□□□□ 0.16
HOMER3-210ENST00000599097 ADH7P40394 386 aa16.03■□□□□ 0.16
HOMER3-210ENST00000599097 IFT88Q13099 833 aa16.03■□□□□ 0.16
HOMER3-210ENST00000599097 MROH9Q5TGP6 573 aa16.03■□□□□ 0.16
HOMER3-210ENST00000599097 ADGRD1Q6QNK2 874 aa16.03■□□□□ 0.16
HOMER3-210ENST00000599097 RILPQ96NA2 401 aa16.03■□□□□ 0.16
HOMER3-210ENST00000599097 SLC6A15Q9H2J7 730 aa16.03■□□□□ 0.16
HOMER3-210ENST00000599097 CXorf21Q9HAI6 301 aa16.03■□□□□ 0.16
HOMER3-210ENST00000599097 CPSF2Q9P2I0 782 aaKnown RBP16.03■□□□□ 0.16
HOMER3-210ENST00000599097 PSME2Q9UL46 239 aa16.03■□□□□ 0.16
HOMER3-210ENST00000599097 AKAP9Q99996 3911 aa16.02■□□□□ 0.16
HOMER3-210ENST00000599097 A0A1W2PR48 441 aa16.02■□□□□ 0.16
HOMER3-210ENST00000599097 GLOD5A6NK44 160 aa16.02■□□□□ 0.16
HOMER3-210ENST00000599097 TMPRSS11DO60235 418 aa16.02■□□□□ 0.16
HOMER3-210ENST00000599097 SMIM24O75264 130 aa16.02■□□□□ 0.16
HOMER3-210ENST00000599097 EEDO75530 441 aaKnown RBP16.02■□□□□ 0.16
HOMER3-210ENST00000599097 CTAG2O75638 210 aa16.02■□□□□ 0.16
HOMER3-210ENST00000599097 TRAPPC6AO75865 159 aa16.02■□□□□ 0.16
HOMER3-210ENST00000599097 RFPL3SP0C7P2 107 aa16.02■□□□□ 0.16
HOMER3-210ENST00000599097 NAGAP17050 411 aa16.02■□□□□ 0.16
HOMER3-210ENST00000599097 ENDOUP21128 410 aaKnown RBP16.02■□□□□ 0.16
HOMER3-210ENST00000599097 BMP5P22003 454 aa16.02■□□□□ 0.16
HOMER3-210ENST00000599097 DNASE1P24855 282 aa16.02■□□□□ 0.16
HOMER3-210ENST00000599097 TRPC1P48995 793 aa16.02■□□□□ 0.16
HOMER3-210ENST00000599097 NR0B1P51843 470 aaKnown RBP16.02■□□□□ 0.16
HOMER3-210ENST00000599097 C2orf54Q08AI8 447 aa16.02■□□□□ 0.16
HOMER3-210ENST00000599097 DUSP8Q13202 625 aa16.02■□□□□ 0.16
HOMER3-210ENST00000599097 RCAN2Q14206 197 aa16.02■□□□□ 0.16
HOMER3-210ENST00000599097 UAP1Q16222 522 aaPredicted RBP16.02■□□□□ 0.16
HOMER3-210ENST00000599097 TSNAXIP1Q2TAA8 658 aa16.02■□□□□ 0.16
HOMER3-210ENST00000599097 FBXL19-AS1Q494R0 122 aa16.02■□□□□ 0.16
HOMER3-210ENST00000599097 ACSF3Q4G176 576 aaPredicted RBP16.02■□□□□ 0.16
HOMER3-210ENST00000599097 FLYWCH1Q4VC44 716 aa16.02■□□□□ 0.16
HOMER3-210ENST00000599097 FRG2Q64ET8 278 aa16.02■□□□□ 0.16
HOMER3-210ENST00000599097 ZZZ3Q8IYH5 903 aa16.02■□□□□ 0.16
HOMER3-210ENST00000599097 ZNF441Q8N8Z8 693 aa16.02■□□□□ 0.16
HOMER3-210ENST00000599097 WDR20Q8TBZ3 569 aa16.02■□□□□ 0.16
HOMER3-210ENST00000599097 SPPL2AQ8TCT8 520 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms