RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 ZNF787Q6DD87 383 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 ARHGAP11AQ6P4F7 1023 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 GALNT18Q6P9A2 607 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 ZYG11AQ6WRX3 759 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 SLC22A16Q86VW1 577 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 GALNT12Q8IXK2 581 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 TAGAPQ8N103 731 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 EID3Q8N140 333 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 C1orf52Q8N6N3 182 aaKnown RBP9.71□□□□□ -0.86
CCDC9-203ENST00000596938 ZNF615Q8N8J6 731 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 ZNF441Q8N8Z8 693 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 C17orf47Q8NEP4 570 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 OR7G1Q8NGA0 311 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 OR52N2Q8NGI0 321 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 DOK4Q8TEW6 326 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 PAQR8Q8TEZ7 354 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 AGAP11Q8TF27 550 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 PHF10Q8WUB8 498 aaKnown RBP9.71□□□□□ -0.86
CCDC9-203ENST00000596938 UBLCP1Q8WVY7 318 aaPredicted RBP9.71□□□□□ -0.86
CCDC9-203ENST00000596938 SREK1Q8WXA9 508 aaKnown RBP9.71□□□□□ -0.86
CCDC9-203ENST00000596938 C11orf24Q96F05 449 aaPredicted RBP9.71□□□□□ -0.86
CCDC9-203ENST00000596938 PHF12Q96QT6 1004 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 VKORC1Q9BQB6 163 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 FAIM2Q9BWQ8 316 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 GSTO2Q9H4Y5 243 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 ZDHHC11Q9H8X9 412 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 IL1RL2Q9HB29 575 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 SIRT5Q9NXA8 310 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 CNIH4Q9P003 139 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 SH3BGRL2Q9UJC5 107 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 ENTPD4Q9Y227 616 aa9.71□□□□□ -0.86
CCDC9-203ENST00000596938 A0A1B0GVC2 190 aa9.7□□□□□ -0.86
CCDC9-203ENST00000596938 A0A1W2PS29 197 aa9.7□□□□□ -0.86
CCDC9-203ENST00000596938 ANKRD33BA6NCL7 494 aa9.7□□□□□ -0.86
CCDC9-203ENST00000596938 CAPN14A8MX76 684 aa9.7□□□□□ -0.86
CCDC9-203ENST00000596938 FOXO6A8MYZ6 492 aa9.7□□□□□ -0.86
CCDC9-203ENST00000596938 ACOT7O00154 380 aa9.7□□□□□ -0.86
CCDC9-203ENST00000596938 UBFD1O14562 309 aaKnown RBP9.7□□□□□ -0.86
CCDC9-203ENST00000596938 ADAM10O14672 748 aa9.7□□□□□ -0.86
CCDC9-203ENST00000596938 PLIN3O60664 434 aa9.7□□□□□ -0.86
CCDC9-203ENST00000596938 CDH16O75309 829 aa9.7□□□□□ -0.86
CCDC9-203ENST00000596938 IGHG3P01860 377 aa9.7□□□□□ -0.86
CCDC9-203ENST00000596938 ATP1B1P05026 303 aa9.7□□□□□ -0.86
CCDC9-203ENST00000596938 CT62P0C5K7 136 aa9.7□□□□□ -0.86
CCDC9-203ENST00000596938 CCL3P10147 92 aa9.7□□□□□ -0.86
CCDC9-203ENST00000596938 DRD2P14416 443 aa9.7□□□□□ -0.86
CCDC9-203ENST00000596938 CHN1P15882 459 aa9.7□□□□□ -0.86
CCDC9-203ENST00000596938 CSNK2A2P19784 350 aaPredicted RBP9.7□□□□□ -0.86
CCDC9-203ENST00000596938 NT5EP21589 574 aa9.7□□□□□ -0.86
CCDC9-203ENST00000596938 HMOX2P30519 316 aa9.7□□□□□ -0.86
CCDC9-203ENST00000596938 SSTR4P31391 388 aa9.7□□□□□ -0.86
CCDC9-203ENST00000596938 DEKP35659 375 aaKnown RBP9.7□□□□□ -0.86
CCDC9-203ENST00000596938 SLCO1A2P46721 670 aa9.7□□□□□ -0.86
CCDC9-203ENST00000596938 NAGLUP54802 743 aa9.7□□□□□ -0.86
CCDC9-203ENST00000596938 ADORA2A-AS1P86434 159 aa9.7□□□□□ -0.86
CCDC9-203ENST00000596938 PLGLB1Q02325 96 aa9.7□□□□□ -0.86
CCDC9-203ENST00000596938 SLC18A2Q05940 514 aa9.7□□□□□ -0.86
CCDC9-203ENST00000596938 MGAT2Q10469 447 aa9.7□□□□□ -0.86
CCDC9-203ENST00000596938 SPIN4Q56A73 249 aa9.7□□□□□ -0.86
CCDC9-203ENST00000596938 TCHHL1Q5QJ38 904 aaPredicted RBP9.7□□□□□ -0.86
CCDC9-203ENST00000596938 FAM47EQ6ZV65 393 aa9.7□□□□□ -0.86
CCDC9-203ENST00000596938 CCNYL1Q8N7R7 359 aa9.7□□□□□ -0.86
CCDC9-203ENST00000596938 FAM57AQ8TBR7 257 aa9.7□□□□□ -0.86
CCDC9-203ENST00000596938 RDH11Q8TC12 318 aa9.7□□□□□ -0.86
CCDC9-203ENST00000596938 ADIPOR1Q96A54 375 aa9.7□□□□□ -0.86
CCDC9-203ENST00000596938 SPACA9Q96E40 222 aaPredicted RBP9.7□□□□□ -0.86
CCDC9-203ENST00000596938 ZNF681Q96N22 645 aa9.7□□□□□ -0.86
CCDC9-203ENST00000596938 DMRTA2Q96SC8 542 aa9.7□□□□□ -0.86
CCDC9-203ENST00000596938 HBEGFQ99075 208 aa9.7□□□□□ -0.86
CCDC9-203ENST00000596938 TTTY12Q9BZ98 90 aa9.7□□□□□ -0.86
CCDC9-203ENST00000596938 ACPTQ9BZG2 426 aa9.7□□□□□ -0.86
CCDC9-203ENST00000596938 DEFB127Q9H1M4 99 aa9.7□□□□□ -0.86
CCDC9-203ENST00000596938 OR10A5Q9H207 317 aa9.7□□□□□ -0.86
CCDC9-203ENST00000596938 ANKZF1Q9H8Y5 726 aa9.7□□□□□ -0.86
CCDC9-203ENST00000596938 OXSMQ9NWU1 459 aa9.7□□□□□ -0.86
CCDC9-203ENST00000596938 ZNF639Q9UID6 485 aa9.7□□□□□ -0.86
CCDC9-203ENST00000596938 MCM8Q9UJA3 840 aa9.7□□□□□ -0.86
CCDC9-203ENST00000596938 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.7□□□□□ -0.86
CCDC9-203ENST00000596938 NOTCH2Q04721 2471 aa9.7□□□□□ -0.86
CCDC9-203ENST00000596938 A0A0G2JMM0 328 aa9.69□□□□□ -0.86
CCDC9-203ENST00000596938 A0A1W2PPB8 328 aa9.69□□□□□ -0.86
CCDC9-203ENST00000596938 A0A1W2PRS3 328 aa9.69□□□□□ -0.86
CCDC9-203ENST00000596938 OR14I1A6ND48 311 aa9.69□□□□□ -0.86
CCDC9-203ENST00000596938 KIR3DP1A8MWS1 328 aa9.69□□□□□ -0.86
CCDC9-203ENST00000596938 PRSS44E7EML9 344 aa9.69□□□□□ -0.86
CCDC9-203ENST00000596938 G3V3Y1 287 aa9.69□□□□□ -0.86
CCDC9-203ENST00000596938 ZNHIT1O43257 154 aa9.69□□□□□ -0.86
CCDC9-203ENST00000596938 HNRNPRO43390 633 aaKnown RBP9.69□□□□□ -0.86
CCDC9-203ENST00000596938 SUSD5O60279 629 aa9.69□□□□□ -0.86
CCDC9-203ENST00000596938 CDC40O60508 579 aaKnown RBP eCLIP9.69□□□□□ -0.86
CCDC9-203ENST00000596938 PDE9AO76083 593 aa9.69□□□□□ -0.86
CCDC9-203ENST00000596938 CPA3P15088 417 aa9.69□□□□□ -0.86
CCDC9-203ENST00000596938 NAGAP17050 411 aa9.69□□□□□ -0.86
CCDC9-203ENST00000596938 KRT4P19013 534 aa9.69□□□□□ -0.86
CCDC9-203ENST00000596938 PIGAP37287 484 aa9.69□□□□□ -0.86
CCDC9-203ENST00000596938 FEN1P39748 380 aaKnown RBP9.69□□□□□ -0.86
CCDC9-203ENST00000596938 GSTM5P46439 218 aa9.69□□□□□ -0.86
CCDC9-203ENST00000596938 NR0B1P51843 470 aaKnown RBP9.69□□□□□ -0.86
CCDC9-203ENST00000596938 RAE1P78406 368 aaKnown RBP9.69□□□□□ -0.86
CCDC9-203ENST00000596938 SLC10A1Q14973 349 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms