RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 ANKRA2Q9H9E1 313 aa21.45■■□□□ 1.02
SRRM1-222ENST00000596378 TMCC3Q9ULS5 477 aa21.45■■□□□ 1.02
SRRM1-222ENST00000596378 ASB4Q9Y574 426 aa21.45■■□□□ 1.02
SRRM1-222ENST00000596378 SCN3AQ9NY46 2000 aa21.45■■□□□ 1.02
SRRM1-222ENST00000596378 AIREO43918 545 aa21.44■■□□□ 1.02
SRRM1-222ENST00000596378 NME6O75414 186 aaPredicted RBP21.44■■□□□ 1.02
SRRM1-222ENST00000596378 SULT1C4O75897 302 aa21.44■■□□□ 1.02
SRRM1-222ENST00000596378 ZNF12P17014 697 aa21.44■■□□□ 1.02
SRRM1-222ENST00000596378 DDX5P17844 614 aaKnown RBP21.44■■□□□ 1.02
SRRM1-222ENST00000596378 TRA2BP62995 288 aaKnown RBP21.44■■□□□ 1.02
SRRM1-222ENST00000596378 SOWAHCQ53LP3 525 aaPredicted RBP21.44■■□□□ 1.02
SRRM1-222ENST00000596378 ABHD17CQ6PCB6 329 aa21.44■■□□□ 1.02
SRRM1-222ENST00000596378 WDR53Q7Z5U6 358 aaPredicted RBP21.44■■□□□ 1.02
SRRM1-222ENST00000596378 CNRIP1Q96F85 164 aaPredicted RBP21.44■■□□□ 1.02
SRRM1-222ENST00000596378 VMP1Q96GC9 406 aa21.44■■□□□ 1.02
SRRM1-222ENST00000596378 ZNF764Q96H86 408 aaPredicted RBP21.44■■□□□ 1.02
SRRM1-222ENST00000596378 COX4I2Q96KJ9 171 aa21.44■■□□□ 1.02
SRRM1-222ENST00000596378 ROGDIQ9GZN7 287 aa21.44■■□□□ 1.02
SRRM1-222ENST00000596378 SLIRPQ9GZT3 109 aaKnown RBP21.44■■□□□ 1.02
SRRM1-222ENST00000596378 CD93Q9NPY3 652 aa21.44■■□□□ 1.02
SRRM1-222ENST00000596378 REV1Q9UBZ9 1251 aa21.44■■□□□ 1.02
SRRM1-222ENST00000596378 ARRDC5A6NEK1 342 aa21.44■■□□□ 1.02
SRRM1-222ENST00000596378 POM121BA6NF01 834 aa21.44■■□□□ 1.02
SRRM1-222ENST00000596378 DNTTP04053 509 aa21.44■■□□□ 1.02
SRRM1-222ENST00000596378 H1F0P07305 194 aaKnown RBP21.44■■□□□ 1.02
SRRM1-222ENST00000596378 OCM2P0CE71 109 aa21.44■■□□□ 1.02
SRRM1-222ENST00000596378 OCMP0CE72 109 aaPredicted RBP21.44■■□□□ 1.02
SRRM1-222ENST00000596378 BMP4P12644 408 aa21.44■■□□□ 1.02
SRRM1-222ENST00000596378 LAMP2P13473 410 aa21.44■■□□□ 1.02
SRRM1-222ENST00000596378 CLK1P49759 484 aaKnown RBP21.44■■□□□ 1.02
SRRM1-222ENST00000596378 FUT5Q11128 374 aa21.44■■□□□ 1.02
SRRM1-222ENST00000596378 LASP1Q14847 261 aaKnown RBP21.44■■□□□ 1.02
SRRM1-222ENST00000596378 MLC1Q15049 377 aa21.44■■□□□ 1.02
SRRM1-222ENST00000596378 DCST1Q5T197 706 aa21.44■■□□□ 1.02
SRRM1-222ENST00000596378 TTLQ8NG68 377 aa21.44■■□□□ 1.02
SRRM1-222ENST00000596378 SUN3Q8TAQ9 357 aa21.44■■□□□ 1.02
SRRM1-222ENST00000596378 ELSPBP1Q96BH3 223 aa21.44■■□□□ 1.02
SRRM1-222ENST00000596378 FCRL4Q96PJ5 515 aa21.44■■□□□ 1.02
SRRM1-222ENST00000596378 FAIM2Q9BWQ8 316 aa21.44■■□□□ 1.02
SRRM1-222ENST00000596378 RAB11FIP5Q9BXF6 653 aa21.44■■□□□ 1.02
SRRM1-222ENST00000596378 RNF167Q9H6Y7 350 aa21.44■■□□□ 1.02
SRRM1-222ENST00000596378 MVB12BQ9H7P6 319 aa21.44■■□□□ 1.02
SRRM1-222ENST00000596378 HMG20AQ9NP66 347 aa21.44■■□□□ 1.02
SRRM1-222ENST00000596378 DSPPQ9NZW4 1301 aa21.43■■□□□ 1.02
SRRM1-222ENST00000596378 AIFM1O95831 613 aa21.43■■□□□ 1.02
SRRM1-222ENST00000596378 HSMCR30P0CW71 290 aa21.43■■□□□ 1.02
SRRM1-222ENST00000596378 ATP5A1P25705 553 aaKnown RBP21.43■■□□□ 1.02
SRRM1-222ENST00000596378 NTSP30990 170 aa21.43■■□□□ 1.02
SRRM1-222ENST00000596378 TMEM35AQ53FP2 167 aa21.43■■□□□ 1.02
SRRM1-222ENST00000596378 TMEM107Q6UX40 140 aa21.43■■□□□ 1.02
SRRM1-222ENST00000596378 CACTIN-AS1Q8N1I8 211 aa21.43■■□□□ 1.02
SRRM1-222ENST00000596378 SLC7A13Q8TCU3 470 aa21.43■■□□□ 1.02
SRRM1-222ENST00000596378 UCK2Q9BZX2 261 aa21.43■■□□□ 1.02
SRRM1-222ENST00000596378 DCSTAMPQ9H295 470 aa21.43■■□□□ 1.02
SRRM1-222ENST00000596378 CTPS2Q9NRF8 586 aa21.43■■□□□ 1.02
SRRM1-222ENST00000596378 APOBEC3BQ9UH17 382 aaKnown RBP21.43■■□□□ 1.02
SRRM1-222ENST00000596378 GPC6Q9Y625 555 aaPredicted RBP21.43■■□□□ 1.02
SRRM1-222ENST00000596378 TMEM247A6NEH6 219 aa21.43■■□□□ 1.02
SRRM1-222ENST00000596378 H0Y8X5 98 aa21.43■■□□□ 1.02
SRRM1-222ENST00000596378 CHRM4P08173 479 aa21.43■■□□□ 1.02
SRRM1-222ENST00000596378 AK4P27144 223 aaPredicted RBP21.43■■□□□ 1.02
SRRM1-222ENST00000596378 GSTM5P46439 218 aa21.43■■□□□ 1.02
SRRM1-222ENST00000596378 SNRPNP63162 240 aaKnown RBP21.43■■□□□ 1.02
SRRM1-222ENST00000596378 LSM11P83369 360 aaKnown RBP eCLIP21.43■■□□□ 1.02
SRRM1-222ENST00000596378 DOC2BQ14184 412 aa21.43■■□□□ 1.02
SRRM1-222ENST00000596378 ANKRD54Q6NXT1 300 aa21.43■■□□□ 1.02
SRRM1-222ENST00000596378 MFSD4AQ8N468 514 aa21.43■■□□□ 1.02
SRRM1-222ENST00000596378 OR4E2Q8NGC2 313 aa21.43■■□□□ 1.02
SRRM1-222ENST00000596378 OR6Q1Q8NGQ2 317 aa21.43■■□□□ 1.02
SRRM1-222ENST00000596378 C16orf58Q96GQ5 468 aa21.43■■□□□ 1.02
SRRM1-222ENST00000596378 QRSL1Q9H0R6 528 aaKnown RBP21.43■■□□□ 1.02
SRRM1-222ENST00000596378 TBC1D29Q9UFV1 150 aa21.43■■□□□ 1.02
SRRM1-222ENST00000596378 OSGIN1Q9UJX0 560 aa21.43■■□□□ 1.02
SRRM1-222ENST00000596378 KCNE3Q9Y6H6 103 aa21.43■■□□□ 1.02
SRRM1-222ENST00000596378 TRBV23OR9-2A0A075B6M9 112 aa21.42■■□□□ 1.02
SRRM1-222ENST00000596378 ISM1B1AKI9 464 aa21.42■■□□□ 1.02
SRRM1-222ENST00000596378 CACNB4O00305 520 aaPredicted RBP21.42■■□□□ 1.02
SRRM1-222ENST00000596378 ADAM23O75077 832 aa21.42■■□□□ 1.02
SRRM1-222ENST00000596378 EPPINO95925 133 aa21.42■■□□□ 1.02
SRRM1-222ENST00000596378 ADAP00813 363 aa21.42■■□□□ 1.02
SRRM1-222ENST00000596378 RGS21Q2M5E4 152 aa21.42■■□□□ 1.02
SRRM1-222ENST00000596378 RD3Q7Z3Z2 195 aa21.42■■□□□ 1.02
SRRM1-222ENST00000596378 CHPT1Q8WUD6 406 aa21.42■■□□□ 1.02
SRRM1-222ENST00000596378 RMI1Q9H9A7 625 aa21.42■■□□□ 1.02
SRRM1-222ENST00000596378 EHD3Q9NZN3 535 aa21.42■■□□□ 1.02
SRRM1-222ENST00000596378 A4GNTQ9UNA3 340 aa21.42■■□□□ 1.02
SRRM1-222ENST00000596378 SERPINB7O75635 380 aa21.41■■□□□ 1.02
SRRM1-222ENST00000596378 HMGN2P05204 90 aaKnown RBP21.41■■□□□ 1.02
SRRM1-222ENST00000596378 SERPINB10P48595 397 aa21.41■■□□□ 1.02
SRRM1-222ENST00000596378 HYAL1Q12794 435 aa21.41■■□□□ 1.02
SRRM1-222ENST00000596378 INAQ16352 499 aa21.41■■□□□ 1.02
SRRM1-222ENST00000596378 PERM1Q5SV97 790 aa21.41■■□□□ 1.02
SRRM1-222ENST00000596378 PPP2R2DQ66LE6 453 aa21.41■■□□□ 1.02
SRRM1-222ENST00000596378 PGBD2Q6P3X8 592 aa21.41■■□□□ 1.02
SRRM1-222ENST00000596378 SLC46A3Q7Z3Q1 461 aa21.41■■□□□ 1.02
SRRM1-222ENST00000596378 TBC1D19Q8N5T2 526 aa21.41■■□□□ 1.02
SRRM1-222ENST00000596378 OR2L5Q8NG80 312 aa21.41■■□□□ 1.02
SRRM1-222ENST00000596378 OR5M11Q96RB7 305 aa21.41■■□□□ 1.02
SRRM1-222ENST00000596378 LOC100506127A0A0U1RQW1 187 aa21.41■■□□□ 1.02
SRRM1-222ENST00000596378 PRSS38A1L453 326 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms