RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 RSL1D1O76021 490 aaKnown RBP10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 ATP1B1P05026 303 aa10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 BPGMP07738 259 aa10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 PORP16435 677 aaPredicted RBP10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 S1PR1P21453 382 aa10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 PRPH2P23942 346 aa10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 DEKP35659 375 aaKnown RBP10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 FEN1P39748 380 aaKnown RBP10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 FUT7Q11130 342 aa10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 ASPHQ12797 758 aa10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 DUSP8Q13202 625 aa10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 MPP2Q14168 576 aa10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 KIAA0040Q15053 153 aa10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 EBPQ15125 230 aaKnown RBP10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 MAPKAPK3Q16644 382 aa10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 MPEG1Q2M385 716 aa10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 UGT3A2Q3SY77 523 aa10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 ARL13AQ5H913 290 aaPredicted RBP10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 CEP85LQ5SZL2 805 aa10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 LYPD8Q6UX82 237 aa10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 SIAH3Q8IW03 269 aa10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 GALNT12Q8IXK2 581 aa10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 FAM26EQ8N5C1 309 aa10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 TMEM156Q8N614 296 aa10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 CPSF7Q8N684 471 aaKnown RBP10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 HORMAD2Q8N7B1 307 aa10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 ZNF615Q8N8J6 731 aa10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 ZNF441Q8N8Z8 693 aa10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 SIMC1Q8NDZ2 872 aa10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 DNAJB8Q8NHS0 232 aa10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 NUBPLQ8TB37 319 aa10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 PRR7Q8TB68 274 aa10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 KLHL29Q96CT2 875 aa10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 ART5Q96L15 291 aa10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 WWTR1Q9GZV5 400 aa10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 DEPPQ9NTK1 212 aa10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 SENP1Q9P0U3 644 aa10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 EXO1Q9UQ84 846 aaKnown RBP10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 DNAJC15Q9Y5T4 150 aa10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 NAV2Q8IVL1 2488 aa10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 CACNA1CQ13936 2221 aa10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 CELSR2Q9HCU4 2923 aa10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 GNG14A0A1W2PPG7 69 aa10.16□□□□□ -0.78
SHKBP1-206ENST00000595523 DYRK3O43781 588 aa10.16□□□□□ -0.78
SHKBP1-206ENST00000595523 CRCPO75575 148 aa10.16□□□□□ -0.78
SHKBP1-206ENST00000595523 CRYABP02511 175 aaKnown RBP10.16□□□□□ -0.78
SHKBP1-206ENST00000595523 FGF4P08620 206 aa10.16□□□□□ -0.78
SHKBP1-206ENST00000595523 ANXA4P09525 319 aaPredicted RBP10.16□□□□□ -0.78
SHKBP1-206ENST00000595523 DHRS4L1P0CG22 281 aa10.16□□□□□ -0.78
SHKBP1-206ENST00000595523 DRD2P14416 443 aa10.16□□□□□ -0.78
SHKBP1-206ENST00000595523 ALDH9A1P49189 494 aa10.16□□□□□ -0.78
SHKBP1-206ENST00000595523 KCNK10P57789 538 aa10.16□□□□□ -0.78
SHKBP1-206ENST00000595523 LTB4RQ15722 352 aa10.16□□□□□ -0.78
SHKBP1-206ENST00000595523 IMPG1Q17R60 797 aa10.16□□□□□ -0.78
SHKBP1-206ENST00000595523 PRICKLE4Q2TBC4 344 aa10.16□□□□□ -0.78
SHKBP1-206ENST00000595523 PIGGQ5H8A4 983 aa10.16□□□□□ -0.78
SHKBP1-206ENST00000595523 SPDYAQ5MJ70 313 aa10.16□□□□□ -0.78
SHKBP1-206ENST00000595523 BEND6Q5SZJ8 279 aaPredicted RBP10.16□□□□□ -0.78
SHKBP1-206ENST00000595523 FAM111BQ6SJ93 734 aa10.16□□□□□ -0.78
SHKBP1-206ENST00000595523 IL20RBQ6UXL0 311 aa10.16□□□□□ -0.78
SHKBP1-206ENST00000595523 LRIG3Q6UXM1 1119 aa10.16□□□□□ -0.78
SHKBP1-206ENST00000595523 RNF111Q6ZNA4 994 aa10.16□□□□□ -0.78
SHKBP1-206ENST00000595523 RNF165Q6ZSG1 346 aa10.16□□□□□ -0.78
SHKBP1-206ENST00000595523 Q6ZSR9 355 aa10.16□□□□□ -0.78
SHKBP1-206ENST00000595523 SULF2Q8IWU5 870 aa10.16□□□□□ -0.78
SHKBP1-206ENST00000595523 PSD4Q8NDX1 1056 aa10.16□□□□□ -0.78
SHKBP1-206ENST00000595523 ADCY4Q8NFM4 1077 aa10.16□□□□□ -0.78
SHKBP1-206ENST00000595523 OR5L2Q8NGL0 311 aa10.16□□□□□ -0.78
SHKBP1-206ENST00000595523 ASB15Q8WXK1 588 aa10.16□□□□□ -0.78
SHKBP1-206ENST00000595523 CTHRC1Q96CG8 243 aa10.16□□□□□ -0.78
SHKBP1-206ENST00000595523 PGM2Q96G03 612 aa10.16□□□□□ -0.78
SHKBP1-206ENST00000595523 PKNOX2Q96KN3 472 aa10.16□□□□□ -0.78
SHKBP1-206ENST00000595523 FAIM2Q9BWQ8 316 aa10.16□□□□□ -0.78
SHKBP1-206ENST00000595523 TSPAN10Q9H1Z9 355 aaPredicted RBP10.16□□□□□ -0.78
SHKBP1-206ENST00000595523 SSU72Q9NP77 194 aaKnown RBP10.16□□□□□ -0.78
SHKBP1-206ENST00000595523 RRAGDQ9NQL2 400 aaPredicted RBP10.16□□□□□ -0.78
SHKBP1-206ENST00000595523 MAT2BQ9NZL9 334 aa10.16□□□□□ -0.78
SHKBP1-206ENST00000595523 ZNF639Q9UID6 485 aa10.16□□□□□ -0.78
SHKBP1-206ENST00000595523 ERRFI1Q9UJM3 462 aaPredicted RBP10.16□□□□□ -0.78
SHKBP1-206ENST00000595523 UTS2RQ9UKP6 389 aa10.16□□□□□ -0.78
SHKBP1-206ENST00000595523 DTX4Q9Y2E6 619 aa10.16□□□□□ -0.78
SHKBP1-206ENST00000595523 FIS1Q9Y3D6 152 aa10.16□□□□□ -0.78
SHKBP1-206ENST00000595523 POLR3HQ9Y535 204 aaPredicted RBP10.16□□□□□ -0.78
SHKBP1-206ENST00000595523 ITPR2Q14571 2701 aa10.16□□□□□ -0.78
SHKBP1-206ENST00000595523 MED12Q93074 2177 aa10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 PINLYPA6NC86 204 aa10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 GOLGA6L10A6NI86 522 aa10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 OR6C76A6NM76 312 aa10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 A8MVJ9 347 aa10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 CTIFO43310 598 aaKnown RBP10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 CBX7O95931 251 aa10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 LINC00032P0C843 101 aa10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 CSNK2A2P19784 350 aaPredicted RBP10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 NT5EP21589 574 aa10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 TACR1P25103 407 aa10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 RFC3P40938 356 aa10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 SERPINB4P48594 390 aa10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 MEOX1P50221 254 aa10.15□□□□□ -0.78
SHKBP1-206ENST00000595523 GPR85P60893 370 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms