RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 QRFPRQ96P65 431 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 ZCCHC2Q9C0B9 1178 aaKnown RBP12.55□□□□□ -0.4
VRK3-209ENST00000594948 SPNS1Q9H2V7 528 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 RHBGQ9H310 441 aa12.55□□□□□ -0.4
VRK3-209ENST00000594948 SPIN1Q9Y657 262 aaPredicted RBP12.55□□□□□ -0.4
VRK3-209ENST00000594948 A0A0B4J293 547 aa12.54□□□□□ -0.4
VRK3-209ENST00000594948 TRDV1A0A1B0GX56 115 aa12.54□□□□□ -0.4
VRK3-209ENST00000594948 ANKDD1BA6NHY2 528 aa12.54□□□□□ -0.4
VRK3-209ENST00000594948 PRODHO43272 600 aa12.54□□□□□ -0.4
VRK3-209ENST00000594948 TLX2O43763 284 aaPredicted RBP12.54□□□□□ -0.4
VRK3-209ENST00000594948 LILRB5O75023 590 aa12.54□□□□□ -0.4
VRK3-209ENST00000594948 MYCP01106 439 aaPredicted RBP12.54□□□□□ -0.4
VRK3-209ENST00000594948 CFL1P23528 166 aaKnown RBP12.54□□□□□ -0.4
VRK3-209ENST00000594948 GABRA5P31644 462 aa12.54□□□□□ -0.4
VRK3-209ENST00000594948 MMP12P39900 470 aa12.54□□□□□ -0.4
VRK3-209ENST00000594948 MAP2K3P46734 347 aa12.54□□□□□ -0.4
VRK3-209ENST00000594948 GIPRP48546 466 aa12.54□□□□□ -0.4
VRK3-209ENST00000594948 GALK2Q01415 458 aa12.54□□□□□ -0.4
VRK3-209ENST00000594948 MXD1Q05195 221 aa12.54□□□□□ -0.4
VRK3-209ENST00000594948 TNK1Q13470 666 aa12.54□□□□□ -0.4
VRK3-209ENST00000594948 GINS1Q14691 196 aa12.54□□□□□ -0.4
VRK3-209ENST00000594948 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.54□□□□□ -0.4
VRK3-209ENST00000594948 PYDC2Q56P42 97 aa12.54□□□□□ -0.4
VRK3-209ENST00000594948 ATAT1Q5SQI0 421 aa12.54□□□□□ -0.4
VRK3-209ENST00000594948 IER5LQ5T953 404 aa12.54□□□□□ -0.4
VRK3-209ENST00000594948 TNFAIP8L2Q6P589 184 aaPredicted RBP12.54□□□□□ -0.4
VRK3-209ENST00000594948 PODNL1Q6PEZ8 512 aa12.54□□□□□ -0.4
VRK3-209ENST00000594948 PAQR6Q6TCH4 344 aa12.54□□□□□ -0.4
VRK3-209ENST00000594948 PLET1Q6UQ28 207 aa12.54□□□□□ -0.4
VRK3-209ENST00000594948 SLC36A4Q6YBV0 504 aa12.54□□□□□ -0.4
VRK3-209ENST00000594948 DEF8Q6ZN54 512 aa12.54□□□□□ -0.4
VRK3-209ENST00000594948 C6orf120Q7Z4R8 191 aa12.54□□□□□ -0.4
VRK3-209ENST00000594948 WDR53Q7Z5U6 358 aaPredicted RBP12.54□□□□□ -0.4
VRK3-209ENST00000594948 KIAA0907Q7Z7F0 614 aaPredicted RBP12.54□□□□□ -0.4
VRK3-209ENST00000594948 FAM129CQ86XR2 697 aa12.54□□□□□ -0.4
VRK3-209ENST00000594948 TBC1D19Q8N5T2 526 aa12.54□□□□□ -0.4
VRK3-209ENST00000594948 OR4D11Q8NGI4 311 aa12.54□□□□□ -0.4
VRK3-209ENST00000594948 SLC7A13Q8TCU3 470 aa12.54□□□□□ -0.4
VRK3-209ENST00000594948 SMPDL3AQ92484 453 aa12.54□□□□□ -0.4
VRK3-209ENST00000594948 NR4A3Q92570 626 aa12.54□□□□□ -0.4
VRK3-209ENST00000594948 UFD1Q92890 307 aa12.54□□□□□ -0.4
VRK3-209ENST00000594948 AP2M1Q96CW1 435 aa12.54□□□□□ -0.4
VRK3-209ENST00000594948 RNF31Q96EP0 1072 aa12.54□□□□□ -0.4
VRK3-209ENST00000594948 LINC00615Q96LM1 132 aaPredicted RBP12.54□□□□□ -0.4
VRK3-209ENST00000594948 ZNF558Q96NG5 402 aa12.54□□□□□ -0.4
VRK3-209ENST00000594948 KATNB1Q9BVA0 655 aa12.54□□□□□ -0.4
VRK3-209ENST00000594948 RSPO3Q9BXY4 272 aaPredicted RBP12.54□□□□□ -0.4
VRK3-209ENST00000594948 RRAGCQ9HB90 399 aa12.54□□□□□ -0.4
VRK3-209ENST00000594948 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.54□□□□□ -0.4
VRK3-209ENST00000594948 SIRT3Q9NTG7 399 aaPredicted RBP12.54□□□□□ -0.4
VRK3-209ENST00000594948 ACSS1Q9NUB1 689 aaPredicted RBP12.54□□□□□ -0.4
VRK3-209ENST00000594948 RNF186Q9NXI6 227 aa12.54□□□□□ -0.4
VRK3-209ENST00000594948 P2RX2Q9UBL9 471 aa12.54□□□□□ -0.4
VRK3-209ENST00000594948 SEC14L3Q9UDX4 400 aa12.54□□□□□ -0.4
VRK3-209ENST00000594948 ASB4Q9Y574 426 aa12.54□□□□□ -0.4
VRK3-209ENST00000594948 DNAH12Q6ZR08 3092 aa12.54□□□□□ -0.4
VRK3-209ENST00000594948 C17orf113A0A1B0GUU1 675 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 NOTOA8MTQ0 251 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 ANHXE9PGG2 379 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 HMGN4O00479 90 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 LEFTY1O75610 366 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 C1QBP02746 253 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 CLEC2LP0C7M8 214 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 XPAP23025 273 aaPredicted RBP12.53□□□□□ -0.4
VRK3-209ENST00000594948 VASPP50552 380 aaPredicted RBP12.53□□□□□ -0.4
VRK3-209ENST00000594948 MANFP55145 182 aaKnown RBP12.53□□□□□ -0.4
VRK3-209ENST00000594948 GPR19Q15760 415 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 TMEM44Q2T9K0 475 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 MINDY4Q4G0A6 757 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 FLYWCH1Q4VC44 716 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 ZNF805Q5CZA5 627 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 PRAMEF14Q5SWL7 426 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 PRAMEF13Q5VWM6 474 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 LHX8Q68G74 356 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 LIPIQ6XZB0 460 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 ANGPTL6Q8NI99 470 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 JPH3Q8WXH2 748 aaPredicted RBP12.53□□□□□ -0.4
VRK3-209ENST00000594948 TM4SF18Q96CE8 201 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 SPATA5L1Q9BVQ7 753 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 ZNF717Q9BY31 904 aaPredicted RBP12.53□□□□□ -0.4
VRK3-209ENST00000594948 DPEP2Q9H4A9 486 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 PPP1R3EQ9H7J1 279 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 PELI2Q9HAT8 420 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 SLAMF7Q9NQ25 335 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 RPRD1BQ9NQG5 326 aaKnown RBP12.53□□□□□ -0.4
VRK3-209ENST00000594948 RBFOX1Q9NWB1 397 aaKnown RBP12.53□□□□□ -0.4
VRK3-209ENST00000594948 ARHGEF9O43307 516 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 ALDH1A1P00352 501 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 PRKAR1AP10644 381 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 CHRNB1P11230 501 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 TNNI3P19429 210 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 ALAS2P22557 587 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 MMP11P24347 488 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 PBLDP30039 288 aaPredicted RBP12.53□□□□□ -0.4
VRK3-209ENST00000594948 TGM4P49221 684 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 GZMKP49863 264 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 DGKEP52429 567 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 RAB25P57735 213 aa12.53□□□□□ -0.4
VRK3-209ENST00000594948 RPS25P62851 125 aaKnown RBP12.53□□□□□ -0.4
VRK3-209ENST00000594948 DAB2P98082 770 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms