RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 SSTR4P31391 388 aa14.1□□□□□ -0.15
TRIM28-203ENST00000593582 PTGS2P35354 604 aa14.1□□□□□ -0.15
TRIM28-203ENST00000593582 DCTP40126 519 aa14.1□□□□□ -0.15
TRIM28-203ENST00000593582 ZNF791Q3KP31 576 aaPredicted RBP14.1□□□□□ -0.15
TRIM28-203ENST00000593582 SPIN4Q56A73 249 aa14.1□□□□□ -0.15
TRIM28-203ENST00000593582 CFAP157Q5JU67 520 aa14.1□□□□□ -0.15
TRIM28-203ENST00000593582 FAM219BQ5XKK7 198 aa14.1□□□□□ -0.15
TRIM28-203ENST00000593582 HLA-DQA1Q5Y7H0 255 aa14.1□□□□□ -0.15
TRIM28-203ENST00000593582 SLC22A10Q63ZE4 541 aa14.1□□□□□ -0.15
TRIM28-203ENST00000593582 ARHGAP11AQ6P4F7 1023 aa14.1□□□□□ -0.15
TRIM28-203ENST00000593582 PAOXQ6QHF9 649 aa14.1□□□□□ -0.15
TRIM28-203ENST00000593582 CHERPQ8IWX8 916 aaKnown RBP14.1□□□□□ -0.15
TRIM28-203ENST00000593582 EID3Q8N140 333 aa14.1□□□□□ -0.15
TRIM28-203ENST00000593582 ZNF808Q8N4W9 903 aaPredicted RBP14.1□□□□□ -0.15
TRIM28-203ENST00000593582 CCDC63Q8NA47 563 aa14.1□□□□□ -0.15
TRIM28-203ENST00000593582 OR7G1Q8NGA0 311 aa14.1□□□□□ -0.15
TRIM28-203ENST00000593582 RDH11Q8TC12 318 aa14.1□□□□□ -0.15
TRIM28-203ENST00000593582 AGAP11Q8TF27 550 aa14.1□□□□□ -0.15
TRIM28-203ENST00000593582 ITLN2Q8WWU7 325 aaPredicted RBP14.1□□□□□ -0.15
TRIM28-203ENST00000593582 TM4SF18Q96CE8 201 aa14.1□□□□□ -0.15
TRIM28-203ENST00000593582 TTTY12Q9BZ98 90 aa14.1□□□□□ -0.15
TRIM28-203ENST00000593582 ACPTQ9BZG2 426 aa14.1□□□□□ -0.15
TRIM28-203ENST00000593582 GSTO2Q9H4Y5 243 aa14.1□□□□□ -0.15
TRIM28-203ENST00000593582 ANKZF1Q9H8Y5 726 aa14.1□□□□□ -0.15
TRIM28-203ENST00000593582 MID1IP1Q9NPA3 183 aa14.1□□□□□ -0.15
TRIM28-203ENST00000593582 MCM8Q9UJA3 840 aa14.1□□□□□ -0.15
TRIM28-203ENST00000593582 CES1P1Q9UKY3 287 aa14.1□□□□□ -0.15
TRIM28-203ENST00000593582 CROCCQ5TZA2 2017 aa14.1□□□□□ -0.15
TRIM28-203ENST00000593582 CELSR2Q9HCU4 2923 aa14.1□□□□□ -0.15
TRIM28-203ENST00000593582 GNG14A0A1W2PPG7 69 aa14.09□□□□□ -0.15
TRIM28-203ENST00000593582 FAM166BA8MTA8 275 aa14.09□□□□□ -0.15
TRIM28-203ENST00000593582 H3BQF6 201 aa14.09□□□□□ -0.15
TRIM28-203ENST00000593582 ZNHIT1O43257 154 aa14.09□□□□□ -0.15
TRIM28-203ENST00000593582 PLIN3O60664 434 aa14.09□□□□□ -0.15
TRIM28-203ENST00000593582 ERAL1O75616 437 aaKnown RBP14.09□□□□□ -0.15
TRIM28-203ENST00000593582 PDE9AO76083 593 aa14.09□□□□□ -0.15
TRIM28-203ENST00000593582 NADKO95544 446 aaPredicted RBP14.09□□□□□ -0.15
TRIM28-203ENST00000593582 CLPSP04118 112 aa14.09□□□□□ -0.15
TRIM28-203ENST00000593582 FBXO45P0C2W1 286 aa14.09□□□□□ -0.15
TRIM28-203ENST00000593582 CSNK2A2P19784 350 aaPredicted RBP14.09□□□□□ -0.15
TRIM28-203ENST00000593582 ALDH9A1P49189 494 aa14.09□□□□□ -0.15
TRIM28-203ENST00000593582 SMSP52788 366 aa14.09□□□□□ -0.15
TRIM28-203ENST00000593582 NAGLUP54802 743 aa14.09□□□□□ -0.15
TRIM28-203ENST00000593582 DNAJB13P59910 316 aa14.09□□□□□ -0.15
TRIM28-203ENST00000593582 ACSM2AQ08AH3 577 aa14.09□□□□□ -0.15
TRIM28-203ENST00000593582 FUT7Q11130 342 aa14.09□□□□□ -0.15
TRIM28-203ENST00000593582 ART3Q13508 389 aa14.09□□□□□ -0.15
TRIM28-203ENST00000593582 ACSM2BQ68CK6 577 aa14.09□□□□□ -0.15
TRIM28-203ENST00000593582 ZNF787Q6DD87 383 aa14.09□□□□□ -0.15
TRIM28-203ENST00000593582 XKRXQ6PP77 449 aa14.09□□□□□ -0.15
TRIM28-203ENST00000593582 FGD2Q7Z6J4 655 aa14.09□□□□□ -0.15
TRIM28-203ENST00000593582 DOLPP1Q86YN1 238 aa14.09□□□□□ -0.15
TRIM28-203ENST00000593582 MMP21Q8N119 569 aa14.09□□□□□ -0.15
TRIM28-203ENST00000593582 VWA5B2Q8N398 1253 aa14.09□□□□□ -0.15
TRIM28-203ENST00000593582 FAM13CQ8NE31 585 aa14.09□□□□□ -0.15
TRIM28-203ENST00000593582 OR52N2Q8NGI0 321 aa14.09□□□□□ -0.15
TRIM28-203ENST00000593582 TP53INP1Q96A56 240 aa14.09□□□□□ -0.15
TRIM28-203ENST00000593582 KLHL29Q96CT2 875 aa14.09□□□□□ -0.15
TRIM28-203ENST00000593582 KCNA7Q96RP8 456 aa14.09□□□□□ -0.15
TRIM28-203ENST00000593582 DEFB127Q9H1M4 99 aa14.09□□□□□ -0.15
TRIM28-203ENST00000593582 OR10A5Q9H207 317 aa14.09□□□□□ -0.15
TRIM28-203ENST00000593582 ZDHHC11Q9H8X9 412 aa14.09□□□□□ -0.15
TRIM28-203ENST00000593582 IL1RL2Q9HB29 575 aa14.09□□□□□ -0.15
TRIM28-203ENST00000593582 MEMO1Q9Y316 297 aa14.09□□□□□ -0.15
TRIM28-203ENST00000593582 TIMM22Q9Y584 194 aa14.09□□□□□ -0.15
TRIM28-203ENST00000593582 ZNF780BQ9Y6R6 833 aa14.09□□□□□ -0.15
TRIM28-203ENST00000593582 CENPEQ02224 2701 aa14.09□□□□□ -0.15
TRIM28-203ENST00000593582 CAPN14A8MX76 684 aa14.08□□□□□ -0.16
TRIM28-203ENST00000593582 PRSS44E7EML9 344 aa14.08□□□□□ -0.16
TRIM28-203ENST00000593582 E9PLN8 166 aa14.08□□□□□ -0.16
TRIM28-203ENST00000593582 PCDH7O60245 1069 aa14.08□□□□□ -0.16
TRIM28-203ENST00000593582 CRCPO75575 148 aa14.08□□□□□ -0.16
TRIM28-203ENST00000593582 GLSO94925 669 aaPredicted RBP14.08□□□□□ -0.16
TRIM28-203ENST00000593582 ATP1B1P05026 303 aa14.08□□□□□ -0.16
TRIM28-203ENST00000593582 TPOP07202 933 aa14.08□□□□□ -0.16
TRIM28-203ENST00000593582 CT62P0C5K7 136 aa14.08□□□□□ -0.16
TRIM28-203ENST00000593582 CPA3P15088 417 aa14.08□□□□□ -0.16
TRIM28-203ENST00000593582 CHN1P15882 459 aa14.08□□□□□ -0.16
TRIM28-203ENST00000593582 FEN1P39748 380 aaKnown RBP14.08□□□□□ -0.16
TRIM28-203ENST00000593582 DNASE1L1P49184 302 aa14.08□□□□□ -0.16
TRIM28-203ENST00000593582 HTR6P50406 440 aa14.08□□□□□ -0.16
TRIM28-203ENST00000593582 NRG3P56975 720 aa14.08□□□□□ -0.16
TRIM28-203ENST00000593582 KCNJ2P63252 427 aa14.08□□□□□ -0.16
TRIM28-203ENST00000593582 HMGCS1Q01581 520 aa14.08□□□□□ -0.16
TRIM28-203ENST00000593582 LYPD8Q6UX82 237 aa14.08□□□□□ -0.16
TRIM28-203ENST00000593582 FRMD7Q6ZUT3 714 aa14.08□□□□□ -0.16
TRIM28-203ENST00000593582 SLC34A3Q8N130 599 aa14.08□□□□□ -0.16
TRIM28-203ENST00000593582 ZNF615Q8N8J6 731 aa14.08□□□□□ -0.16
TRIM28-203ENST00000593582 OR10G3Q8NGC4 313 aa14.08□□□□□ -0.16
TRIM28-203ENST00000593582 FAM57AQ8TBR7 257 aa14.08□□□□□ -0.16
TRIM28-203ENST00000593582 PAQR8Q8TEZ7 354 aa14.08□□□□□ -0.16
TRIM28-203ENST00000593582 PHF12Q96QT6 1004 aa14.08□□□□□ -0.16
TRIM28-203ENST00000593582 VKORC1Q9BQB6 163 aa14.08□□□□□ -0.16
TRIM28-203ENST00000593582 BRINP2Q9C0B6 783 aa14.08□□□□□ -0.16
TRIM28-203ENST00000593582 SH2D2AQ9NP31 389 aa14.08□□□□□ -0.16
TRIM28-203ENST00000593582 PLSCR2Q9NRY7 297 aa14.08□□□□□ -0.16
TRIM28-203ENST00000593582 OXSMQ9NWU1 459 aa14.08□□□□□ -0.16
TRIM28-203ENST00000593582 CNIH4Q9P003 139 aa14.08□□□□□ -0.16
TRIM28-203ENST00000593582 KLF2Q9Y5W3 355 aaPredicted RBP14.08□□□□□ -0.16
TRIM28-203ENST00000593582 MYO7BQ6PIF6 2116 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms